Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:02:52 (17721): wrapper (7.7.26015): starting
13:02:52 (17721): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:02:52] Arguments: --nthreads 8
[2025-10-12 13:02:52] Threads: 8
[2025-10-12 13:02:52] Checking for CVMFS
[2025-10-12 13:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:02:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:02:52] 2.11.4.0 5420 53139 58700 151627 2 188 10511302 18432000 1833 130560 0 47540817 99.974 2401462 38354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:02:52] CVMFS is ok
[2025-10-12 13:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:02:52] Further information can be found at the LHC@home message board.
[2025-10-12 13:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:02:52] Checking for apptainer binary...
[2025-10-12 13:02:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:02:52] Running /usr/bin/apptainer --version
[2025-10-12 13:02:52] apptainer version 1.3.2-1.el7
[2025-10-12 13:02:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:02:53] c-206-22.aglt2.org
[2025-10-12 13:02:53] apptainer works
[2025-10-12 13:02:53] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:02:53] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:02:53] Starting ATLAS job with PandaID=6839989829
[2025-10-12 13:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:04:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:04:27] 2025-10-12 20:03:45,331 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:04:27] 2025-10-12 20:03:45,331 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:04:27] 2025-10-12 20:03:45,334 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:04:27] 2025-10-12 20:03:45,335 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 16:04:27] 2025-10-12 20:03:45,336 | INFO     | sum of deviations: 19304771717.5
[2025-10-12 16:04:27] 2025-10-12 20:03:45,337 | INFO     | mean x: 1760294006.5
[2025-10-12 16:04:27] 2025-10-12 20:03:45,337 | INFO     | mean y: 2446501.7921348317
[2025-10-12 16:04:27] 2025-10-12 20:03:45,337 | INFO     | -- intersect: -19429896025.764694
[2025-10-12 16:04:27] 2025-10-12 20:03:45,337 | INFO     | intersect: -19429896025.764694
[2025-10-12 16:04:27] 2025-10-12 20:03:45,338 | INFO     | chi2: 2.2275731666119216
[2025-10-12 16:04:27] 2025-10-12 20:03:45,338 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,339 | INFO     | sum of deviations: 30531189910.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,340 | INFO     | mean x: 1760293854.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,340 | INFO     | mean y: 2458159.7514450867
[2025-10-12 16:04:27] 2025-10-12 20:03:45,340 | INFO     | -- intersect: -33473011664.89921
[2025-10-12 16:04:27] 2025-10-12 20:03:45,340 | INFO     | intersect: -33473011664.89921
[2025-10-12 16:04:27] 2025-10-12 20:03:45,341 | INFO     | chi2: 1.40753387649697
[2025-10-12 16:04:27] 2025-10-12 20:03:45,341 | INFO     | current chi2=1.40753387649697 (change=36.81312481251555 %)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,341 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,342 | INFO     | sum of deviations: 29498991799.500004
[2025-10-12 16:04:27] 2025-10-12 20:03:45,343 | INFO     | mean x: 1760293701.5
[2025-10-12 16:04:27] 2025-10-12 20:03:45,343 | INFO     | mean y: 2456995.3154761903
[2025-10-12 16:04:27] 2025-10-12 20:03:45,343 | INFO     | -- intersect: -35315976009.81526
[2025-10-12 16:04:27] 2025-10-12 20:03:45,343 | INFO     | intersect: -35315976009.81526
[2025-10-12 16:04:27] 2025-10-12 20:03:45,344 | INFO     | chi2: 1.4081624602985567
[2025-10-12 16:04:27] 2025-10-12 20:03:45,344 | INFO     | current chi2=1.4081624602985567 (change=-0.04465852027313923 %)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,344 | INFO     | right removable region: 167
[2025-10-12 16:04:27] 2025-10-12 20:03:45,344 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,346 | INFO     | sum of deviations: -7381039527.999998
[2025-10-12 16:04:27] 2025-10-12 20:03:45,346 | INFO     | mean x: 1760294159.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,346 | INFO     | mean y: 2474566.393063584
[2025-10-12 16:04:27] 2025-10-12 20:03:45,346 | INFO     | -- intersect: 8095307159.351879
[2025-10-12 16:04:27] 2025-10-12 20:03:45,347 | INFO     | intersect: 8095307159.351879
[2025-10-12 16:04:27] 2025-10-12 20:03:45,347 | INFO     | chi2: 0.8626722946281296
[2025-10-12 16:04:27] 2025-10-12 20:03:45,347 | INFO     | current chi2=0.8626722946281296 (change=61.27299845597302 %)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,348 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,349 | INFO     | sum of deviations: -8497912196.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,349 | INFO     | mean x: 1760294311.5
[2025-10-12 16:04:27] 2025-10-12 20:03:45,349 | INFO     | mean y: 2475766.6785714286
[2025-10-12 16:04:27] 2025-10-12 20:03:45,349 | INFO     | -- intersect: 10176825067.287207
[2025-10-12 16:04:27] 2025-10-12 20:03:45,350 | INFO     | intersect: 10176825067.287207
[2025-10-12 16:04:27] 2025-10-12 20:03:45,350 | INFO     | chi2: 0.8460066171075155
[2025-10-12 16:04:27] 2025-10-12 20:03:45,350 | INFO     | current chi2=0.8460066171075155 (change=1.9318665528488008 %)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,350 | INFO     | left removable region: 20
[2025-10-12 16:04:27] 2025-10-12 20:03:45,351 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,352 | INFO     | sum of deviations: 2592511163.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,352 | INFO     | mean x: 1760294281.0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,352 | INFO     | mean y: 2488834.326530612
[2025-10-12 16:04:27] 2025-10-12 20:03:45,352 | INFO     | -- intersect: -4630866237.958967
[2025-10-12 16:04:27] 2025-10-12 20:03:45,353 | INFO     | intersect: -4630866237.958967
[2025-10-12 16:04:27] 2025-10-12 20:03:45,353 | INFO     | chi2: 9.680298620808735e-05
[2025-10-12 16:04:27] 2025-10-12 20:03:45,353 | INFO     | -- intersect: -4630866237.958967
[2025-10-12 16:04:27] 2025-10-12 20:03:45,353 | INFO     | current memory leak: 2.63 B/s (using 147 data points, chi2=0.00)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,354 | INFO     | could have reported an average CPU frequency of 2526 MHz (9 samples)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,354 | INFO     | ..............................
[2025-10-12 16:04:27] 2025-10-12 20:03:45,354 | INFO     | . Timing measurements:
[2025-10-12 16:04:27] 2025-10-12 20:03:45,355 | INFO     | . get job = 0 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,355 | INFO     | . initial setup = 2 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,355 | INFO     | . payload setup = 4 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,355 | INFO     | . stage-in = 0 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,355 | INFO     | . payload execution = 10814 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,355 | INFO     | . stage-out = 2 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,356 | INFO     | . log creation = 0 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,356 | INFO     | ..............................
[2025-10-12 16:04:27] 2025-10-12 20:03:45,518 | INFO     | 
[2025-10-12 16:04:27] 2025-10-12 20:03:45,518 | INFO     | job summary report
[2025-10-12 16:04:27] 2025-10-12 20:03:45,518 | INFO     | --------------------------------------------------
[2025-10-12 16:04:27] 2025-10-12 20:03:45,519 | INFO     | PanDA job id: 6839989829
[2025-10-12 16:04:27] 2025-10-12 20:03:45,519 | INFO     | task id: 46676269
[2025-10-12 16:04:27] 2025-10-12 20:03:45,519 | INFO     | errors: (none)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:04:27] 2025-10-12 20:03:45,519 | INFO     | pilot state: finished 
[2025-10-12 16:04:27] 2025-10-12 20:03:45,519 | INFO     | transexitcode: 0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,520 | INFO     | exeerrorcode: 0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,520 | INFO     | exeerrordiag: 
[2025-10-12 16:04:27] 2025-10-12 20:03:45,520 | INFO     | exitcode: 0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,520 | INFO     | exitmsg: OK
[2025-10-12 16:04:27] 2025-10-12 20:03:45,520 | INFO     | cpuconsumptiontime: 81878 s
[2025-10-12 16:04:27] 2025-10-12 20:03:45,520 | INFO     | nevents: 400
[2025-10-12 16:04:27] 2025-10-12 20:03:45,521 | INFO     | neventsw: 0
[2025-10-12 16:04:27] 2025-10-12 20:03:45,521 | INFO     | pid: 28953
[2025-10-12 16:04:27] 2025-10-12 20:03:45,521 | INFO     | pgrp: 28953
[2025-10-12 16:04:27] 2025-10-12 20:03:45,521 | INFO     | corecount: 8
[2025-10-12 16:04:27] 2025-10-12 20:03:45,521 | INFO     | event service: False
[2025-10-12 16:04:27] 2025-10-12 20:03:45,521 | INFO     | sizes: {0: 2348635, 1: 2348834, 4: 2349096, 12: 2349124, 10819: 2378198, 10823: 2387380, 10827: 2387582}
[2025-10-12 16:04:27] 2025-10-12 20:03:45,522 | INFO     | --------------------------------------------------
[2025-10-12 16:04:27] 2025-10-12 20:03:45,522 | INFO     | 
[2025-10-12 16:04:27] 2025-10-12 20:03:45,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:04:27] 2025-10-12 20:03:45,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:04:27] 2025-10-12 20:03:45,545 | INFO     | job 6839989829 has completed (purged errors)
[2025-10-12 16:04:27] 2025-10-12 20:03:45,545 | INFO     | overall cleanup function is called
[2025-10-12 16:04:27] 2025-10-12 20:03:46,553 | INFO     | --- collectZombieJob: --- 10, [28953]
[2025-10-12 16:04:27] 2025-10-12 20:03:46,553 | INFO     | zombie collector waiting for pid 28953
[2025-10-12 16:04:27] 2025-10-12 20:03:46,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:04:27] 2025-10-12 20:03:46,553 | INFO     | collected zombie processes
[2025-10-12 16:04:27] 2025-10-12 20:03:46,553 | INFO     | will attempt to kill all subprocesses of pid=28953
[2025-10-12 16:04:27] 2025-10-12 20:03:46,686 | INFO     | process IDs to be killed: [28953] (in reverse order)
[2025-10-12 16:04:27] 2025-10-12 20:03:46,730 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:04:27] 2025-10-12 20:03:46,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:04:27] 2025-10-12 20:03:46,732 | INFO     | did not find any defunct processes belonging to 28953
[2025-10-12 16:04:27] 2025-10-12 20:03:46,734 | INFO     | did not find any defunct processes belonging to 28953
[2025-10-12 16:04:27] 2025-10-12 20:03:46,735 | INFO     | ready for new job
[2025-10-12 16:04:27] 2025-10-12 20:03:46,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:04:27] 2025-10-12 20:03:46,736 | INFO     | ***************************************
[2025-10-12 16:04:27] 2025-10-12 20:03:46,736 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:04:27] 2025-10-12 20:03:46,736 | INFO     | ***************************************
[2025-10-12 16:04:27] 2025-10-12 20:03:46,736 | INFO     | 
[2025-10-12 16:04:27] 2025-10-12 20:03:46,737 | INFO     | architecture information:
[2025-10-12 16:04:27] 2025-10-12 20:03:46,738 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:04:27] 2025-10-12 20:03:46,748 | INFO     | cat /etc/os-release:
[2025-10-12 16:04:27] NAME="CentOS Linux"
[2025-10-12 16:04:27] VERSION="7 (Core)"
[2025-10-12 16:04:27] ID="centos"
[2025-10-12 16:04:27] ID_LIKE="rhel fedora"
[2025-10-12 16:04:27] VERSION_ID="7"
[2025-10-12 16:04:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:04:27] ANSI_COLOR="0;31"
[2025-10-12 16:04:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:04:27] HOME_URL="https://www.centos.org/"
[2025-10-12 16:04:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:04:27] 
[2025-10-12 16:04:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:04:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:04:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:04:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:04:27] 
[2025-10-12 16:04:27] 2025-10-12 20:03:46,748 | INFO     | ***************************************
[2025-10-12 16:04:27] 2025-10-12 20:03:47,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:04:27] 2025-10-12 20:03:47,267 | INFO     | sufficient remaining disk space (28357689344 B)
[2025-10-12 16:04:27] 2025-10-12 20:03:47,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:04:27] 2025-10-12 20:03:47,268 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:04:27] 2025-10-12 20:03:47,268 | INFO     | update_server=False
[2025-10-12 16:04:27] 2025-10-12 20:03:47,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:04:27] 2025-10-12 20:03:47,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:04:27] 2025-10-12 20:03:47,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:04:27] 2025-10-12 20:03:47,517 | INFO     | all data control threads have been joined
[2025-10-12 16:04:27] 2025-10-12 20:03:47,899 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:04:27] 2025-10-12 20:03:47,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:04:27] 2025-10-12 20:03:47,940 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:04:27] 2025-10-12 20:03:47,940 | INFO     | aborting loop
[2025-10-12 16:04:27] 2025-10-12 20:03:48,269 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,270 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,286 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,363 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,432 | INFO     | all job control threads have been joined
[2025-10-12 16:04:27] 2025-10-12 20:03:48,456 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,520 | INFO     | [data] control thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,632 | INFO     | all payload control threads have been joined
[2025-10-12 16:04:27] 2025-10-12 20:03:48,743 | INFO     | [job] validate thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,764 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:48,945 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:49,008 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:49,094 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:49,278 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:49,438 | INFO     | [job] control thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:49,637 | INFO     | [payload] control thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:03:51,939 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:04:27] 2025-10-12 20:04:17,675 | INFO     | PID=21708 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:04:27] 2025-10-12 20:04:17,676 | INFO     | .. there are 3 such processes running
[2025-10-12 16:04:27] 2025-10-12 20:04:17,676 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:04:27] 2025-10-12 20:04:17,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:04:27] 2025-10-12 20:04:17,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:04:27] 2025-10-12 20:04:20,614 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:04:27] 2025-10-12 20:04:22,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909061613376)>', '<ExcThread(monitor, started 139908475770624)>']
[2025-10-12 16:04:27] 2025-10-12 20:04:22,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:04:27] 2025-10-12 20:04:22,702 | INFO     | [monitor] control thread has ended
[2025-10-12 16:04:27] 2025-10-12 20:04:27,518 | INFO     | all workflow threads have been joined
[2025-10-12 16:04:27] 2025-10-12 20:04:27,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:04:27] 2025-10-12 20:04:27,518 | INFO     | traces error code: 0
[2025-10-12 16:04:27] 2025-10-12 20:04:27,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:04:27] 2025-10-12 20:04:27,621 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:04:27] 2025-10-12 20:04:27,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:04:27] 2025-10-12 20:04:27,626 [wrapper] pilotpid: 21708
[2025-10-12 16:04:27] 2025-10-12 20:04:27,629 [wrapper] Pilot exit status: 0
[2025-10-12 16:04:27] 2025-10-12 20:04:27,638 [wrapper] pandaids: 6839989829
[2025-10-12 16:04:27] 2025-10-12 20:04:27,678 [wrapper] cleanup supervisor_pilot 15303 21709
[2025-10-12 16:04:27] 2025-10-12 20:04:27,680 [wrapper] Test setup, not cleaning
[2025-10-12 16:04:27] 2025-10-12 20:04:27,683 [wrapper] apfmon messages muted
[2025-10-12 16:04:27] 2025-10-12 20:04:27,685 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:04:27] 2025-10-12 20:04:27,687 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:04:27]  *** Error codes and diagnostics ***
[2025-10-12 16:04:27]     "exeErrorCode": 0,
[2025-10-12 16:04:27]     "exeErrorDiag": "",
[2025-10-12 16:04:27]     "pilotErrorCode": 0,
[2025-10-12 16:04:27]     "pilotErrorDiag": "",
[2025-10-12 16:04:27]  *** Listing of results directory ***
[2025-10-12 16:04:27] total 416732
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:08 queuedata.json
[2025-10-12 16:04:27] -rwx------ 1 boincer umatlas     36292 Oct 12 09:10 runpilot2-wrapper.sh
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:04:27] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:02 run_atlas
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:02 job.xml
[2025-10-12 16:04:27] -rw-r--r-- 2 boincer umatlas 218910766 Oct 12 13:02 EVNT.46676267._003854.pool.root.1
[2025-10-12 16:04:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:02 start_atlas.sh
[2025-10-12 16:04:27] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:02 shared
[2025-10-12 16:04:27] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 13:02 input.tar.gz
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:02 boinc_lockfile
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 13:02 pandaJob.out
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas    975528 Oct 12 13:03 agis_schedconf.cvmfs.json
[2025-10-12 16:04:27] drwx------ 5 boincer umatlas      4096 Oct 12 13:03 pilot3
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 16:02 init_data.xml
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas 200041744 Oct 12 16:03 HITS.46676269._079161.pool.root.1
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas       530 Oct 12 16:03 boinc_task_state.xml
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas      1054 Oct 12 16:03 memory_monitor_summary.json
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas   1560580 Oct 12 16:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas    409685 Oct 12 16:03 log.46676269._079161.job.log.tgz.1
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas      7854 Oct 12 16:03 heartbeat.json
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas        95 Oct 12 16:03 pilot_heartbeat.json
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas        28 Oct 12 16:03 wrapper_checkpoint.txt
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:03 boinc_mmap_file
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas      4893 Oct 12 16:04 pilotlog.txt
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas   1525858 Oct 12 16:04 log.46676269._079161.job.log.1
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas       357 Oct 12 16:04 output.list
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:04 runtime_log
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas   1955840 Oct 12 16:04 result.tar.gz
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 16:04 runtime_log.err
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas       661 Oct 12 16:04 dr9NDmx0AS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCyjNDm4EYspn.diag
[2025-10-12 16:04:27] -rw-r--r-- 1 boincer umatlas     20844 Oct 12 16:04 stderr.txt
[2025-10-12 16:04:27] HITS file was successfully produced:
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas 200041744 Oct 12 16:03 shared/HITS.pool.root.1
[2025-10-12 16:04:27]  *** Contents of shared directory: ***
[2025-10-12 16:04:27] total 411632
[2025-10-12 16:04:27] -rw-r--r-- 2 boincer umatlas 218910766 Oct 12 13:02 ATLAS.root_0
[2025-10-12 16:04:27] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:02 start_atlas.sh
[2025-10-12 16:04:27] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 13:02 input.tar.gz
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas 200041744 Oct 12 16:03 HITS.pool.root.1
[2025-10-12 16:04:27] -rw------- 1 boincer umatlas   1955840 Oct 12 16:04 result.tar.gz
16:04:29 (17721): run_atlas exited; CPU time 82009.119391
16:04:29 (17721): called boinc_finish(0)

</stderr_txt>
]]>

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