Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:40:31 (3223058): wrapper (7.7.26015): starting
21:40:31 (3223058): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:40:31] Arguments: --nthreads 12
[2025-10-12 21:40:31] Threads: 12
[2025-10-12 21:40:31] Checking for CVMFS
[2025-10-12 21:40:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:40:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:40:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:40:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:40:32] 2.13.2.0 1969590 130054 277768 151643 2 80 29478819 32935936 15763 16776704 0 94336278 99.700 78337073 29738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 21:40:32] CVMFS is ok
[2025-10-12 21:40:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:40:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:40:32] Further information can be found at the LHC@home message board.
[2025-10-12 21:40:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:40:32] Checking for apptainer binary...
[2025-10-12 21:40:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:40:32] Running /usr/bin/apptainer --version
[2025-10-12 21:40:32] apptainer version 1.4.3-1.el9
[2025-10-12 21:40:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:40:32] c-8-36.aglt2.org
[2025-10-12 21:40:32] apptainer works
[2025-10-12 21:40:32] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:40:32] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:40:32] Starting ATLAS job with PandaID=6839988316
[2025-10-12 21:40:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:32:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:32:00] 2025-10-13 07:30:45,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:32:00] 2025-10-13 07:30:46,043 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:32:00] 2025-10-13 07:30:46,097 | INFO     | sum of square deviations: 12406842555.263157
[2025-10-13 03:32:00] 2025-10-13 07:30:46,100 | INFO     | sum of deviations: -65788424045.82457
[2025-10-13 03:32:00] 2025-10-13 07:30:46,154 | INFO     | mean x: 1760330146.1929824
[2025-10-13 03:32:00] 2025-10-13 07:30:46,154 | INFO     | mean y: 2291869.239766082
[2025-10-13 03:32:00] 2025-10-13 07:30:46,154 | INFO     | -- intersect: 9336604415.123112
[2025-10-13 03:32:00] 2025-10-13 07:30:46,154 | INFO     | intersect: 9336604415.123112
[2025-10-13 03:32:00] 2025-10-13 07:30:46,155 | INFO     | chi2: 4.289076753202852
[2025-10-13 03:32:00] 2025-10-13 07:30:46,155 | INFO     | sum of square deviations: 11870886142.652794
[2025-10-13 03:32:00] 2025-10-13 07:30:46,210 | INFO     | sum of deviations: 1038237911.0593705
[2025-10-13 03:32:00] 2025-10-13 07:30:46,210 | INFO     | mean x: 1760329993.7151334
[2025-10-13 03:32:00] 2025-10-13 07:30:46,210 | INFO     | mean y: 2310795.7922848663
[2025-10-13 03:32:00] 2025-10-13 07:30:46,210 | INFO     | -- intersect: -151649179.35086235
[2025-10-13 03:32:00] 2025-10-13 07:30:46,210 | INFO     | intersect: -151649179.35086235
[2025-10-13 03:32:00] 2025-10-13 07:30:46,261 | INFO     | chi2: 2.0431237832885976
[2025-10-13 03:32:00] 2025-10-13 07:30:46,261 | INFO     | current chi2=2.0431237832885976 (change=52.3644853927386 %)
[2025-10-13 03:32:00] 2025-10-13 07:30:46,262 | INFO     | sum of square deviations: 11350315168.274097
[2025-10-13 03:32:00] 2025-10-13 07:30:46,288 | INFO     | sum of deviations: 12191077196.789146
[2025-10-13 03:32:00] 2025-10-13 07:30:46,289 | INFO     | mean x: 1760329841.1957831
[2025-10-13 03:32:00] 2025-10-13 07:30:46,289 | INFO     | mean y: 2314063.8493975904
[2025-10-13 03:32:00] 2025-10-13 07:30:46,289 | INFO     | -- intersect: -1888410261.2173026
[2025-10-13 03:32:00] 2025-10-13 07:30:46,289 | INFO     | intersect: -1888410261.2173026
[2025-10-13 03:32:00] 2025-10-13 07:30:46,290 | INFO     | chi2: 2.0011098029702823
[2025-10-13 03:32:00] 2025-10-13 07:30:46,290 | INFO     | current chi2=2.0011098029702823 (change=2.056360004320926 %)
[2025-10-13 03:32:00] 2025-10-13 07:30:46,290 | INFO     | right removable region: 331
[2025-10-13 03:32:00] 2025-10-13 07:30:46,290 | INFO     | sum of square deviations: 11870553568.219563
[2025-10-13 03:32:00] 2025-10-13 07:30:46,293 | INFO     | sum of deviations: -121951936822.88428
[2025-10-13 03:32:00] 2025-10-13 07:30:46,294 | INFO     | mean x: 1760330298.7181008
[2025-10-13 03:32:00] 2025-10-13 07:30:46,294 | INFO     | mean y: 2307768.243323442
[2025-10-13 03:32:00] 2025-10-13 07:30:46,294 | INFO     | -- intersect: 18087032136.230618
[2025-10-13 03:32:00] 2025-10-13 07:30:46,294 | INFO     | intersect: 18087032136.230618
[2025-10-13 03:32:00] 2025-10-13 07:30:46,295 | INFO     | chi2: 2.699753598074205
[2025-10-13 03:32:00] 2025-10-13 07:30:46,295 | INFO     | current chi2=2.699753598074205 (change=37.05513439324268 %)
[2025-10-13 03:32:00] 2025-10-13 07:30:46,295 | INFO     | sum of square deviations: 11349939293.237965
[2025-10-13 03:32:00] 2025-10-13 07:30:46,298 | INFO     | sum of deviations: -134254040462.91263
[2025-10-13 03:32:00] 2025-10-13 07:30:46,299 | INFO     | mean x: 1760330451.2439759
[2025-10-13 03:32:00] 2025-10-13 07:30:46,299 | INFO     | mean y: 2311367.4186746986
[2025-10-13 03:32:00] 2025-10-13 07:30:46,299 | INFO     | -- intersect: 20824579180.79869
[2025-10-13 03:32:00] 2025-10-13 07:30:46,299 | INFO     | intersect: 20824579180.79869
[2025-10-13 03:32:00] 2025-10-13 07:30:46,300 | INFO     | chi2: 2.6043302222597506
[2025-10-13 03:32:00] 2025-10-13 07:30:46,300 | INFO     | current chi2=2.6043302222597506 (change=3.534521664589025 %)
[2025-10-13 03:32:00] 2025-10-13 07:30:46,300 | INFO     | left removable region: 20
[2025-10-13 03:32:00] 2025-10-13 07:30:46,300 | INFO     | sum of square deviations: 9329901554.791044
[2025-10-13 03:32:00] 2025-10-13 07:30:46,303 | INFO     | sum of deviations: -29647233377.89067
[2025-10-13 03:32:00] 2025-10-13 07:30:46,303 | INFO     | mean x: 1760330420.7717042
[2025-10-13 03:32:00] 2025-10-13 07:30:46,303 | INFO     | mean y: 2327519.0578778135
[2025-10-13 03:32:00] 2025-10-13 07:30:46,304 | INFO     | -- intersect: 5596055009.142636
[2025-10-13 03:32:00] 2025-10-13 07:30:46,304 | INFO     | intersect: 5596055009.142636
[2025-10-13 03:32:00] 2025-10-13 07:30:46,304 | INFO     | chi2: 0.19750118934371755
[2025-10-13 03:32:00] 2025-10-13 07:30:46,304 | INFO     | -- intersect: 5596055009.142636
[2025-10-13 03:32:00] 2025-10-13 07:30:46,304 | INFO     | current memory leak: -3.18 B/s (using 311 data points, chi2=0.20)
[2025-10-13 03:32:00] 2025-10-13 07:30:46,305 | INFO     | could have reported an average CPU frequency of 2601 MHz (15 samples)
[2025-10-13 03:32:00] 2025-10-13 07:30:46,305 | INFO     | ..............................
[2025-10-13 03:32:00] 2025-10-13 07:30:46,305 | INFO     | . Timing measurements:
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . get job = 0 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . initial setup = 3 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . payload setup = 19 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . stage-in = 0 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . payload execution = 20852 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . stage-out = 8 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | . log creation = 0 s
[2025-10-13 03:32:00] 2025-10-13 07:30:46,306 | INFO     | ..............................
[2025-10-13 03:32:00] 2025-10-13 07:30:47,294 | INFO     | 
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | job summary report
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | --------------------------------------------------
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | PanDA job id: 6839988316
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | task id: 46676269
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | errors: (none)
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:32:00] 2025-10-13 07:30:47,295 | INFO     | pilot state: finished 
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | transexitcode: 0
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | exeerrorcode: 0
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | exeerrordiag: 
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | exitcode: 0
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | exitmsg: OK
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | cpuconsumptiontime: 50390 s
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | nevents: 400
[2025-10-13 03:32:00] 2025-10-13 07:30:47,296 | INFO     | neventsw: 0
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | pid: 3234509
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | pgrp: 3234509
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | corecount: 12
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | event service: False
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348913, 13: 2348913, 16: 2349231, 24: 2349259, 20878: 2382723, 20891: 2391721, 20893: 2391777, 20944: 2391971}
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | --------------------------------------------------
[2025-10-13 03:32:00] 2025-10-13 07:30:47,297 | INFO     | 
[2025-10-13 03:32:00] 2025-10-13 07:30:47,301 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:32:00] 2025-10-13 07:30:47,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:32:00] 2025-10-13 07:30:47,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:32:00] 2025-10-13 07:30:47,370 | INFO     | job 6839988316 has completed (purged errors)
[2025-10-13 03:32:00] 2025-10-13 07:30:47,371 | INFO     | overall cleanup function is called
[2025-10-13 03:32:00] 2025-10-13 07:30:48,382 | INFO     | --- collectZombieJob: --- 10, [3234509]
[2025-10-13 03:32:00] 2025-10-13 07:30:48,383 | INFO     | zombie collector waiting for pid 3234509
[2025-10-13 03:32:00] 2025-10-13 07:30:48,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:32:00] 2025-10-13 07:30:48,383 | INFO     | collected zombie processes
[2025-10-13 03:32:00] 2025-10-13 07:30:48,383 | INFO     | will attempt to kill all subprocesses of pid=3234509
[2025-10-13 03:32:00] 2025-10-13 07:30:50,514 | INFO     | process IDs to be killed: [3234509] (in reverse order)
[2025-10-13 03:32:00] 2025-10-13 07:30:50,848 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:32:00] 2025-10-13 07:30:50,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:32:00] 2025-10-13 07:30:50,977 | INFO     | did not find any defunct processes belonging to 3234509
[2025-10-13 03:32:00] 2025-10-13 07:30:51,007 | INFO     | did not find any defunct processes belonging to 3234509
[2025-10-13 03:32:00] 2025-10-13 07:30:51,007 | INFO     | ready for new job
[2025-10-13 03:32:00] 2025-10-13 07:30:51,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:32:00] 2025-10-13 07:30:51,010 | INFO     | ***************************************
[2025-10-13 03:32:00] 2025-10-13 07:30:51,010 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:32:00] 2025-10-13 07:30:51,011 | INFO     | ***************************************
[2025-10-13 03:32:00] 2025-10-13 07:30:51,011 | INFO     | 
[2025-10-13 03:32:00] 2025-10-13 07:30:51,027 | INFO     | architecture information:
[2025-10-13 03:32:00] 2025-10-13 07:30:51,090 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:32:00] 2025-10-13 07:30:51,305 | INFO     | cat /etc/os-release:
[2025-10-13 03:32:00] NAME="CentOS Linux"
[2025-10-13 03:32:00] VERSION="7 (Core)"
[2025-10-13 03:32:00] ID="centos"
[2025-10-13 03:32:00] ID_LIKE="rhel fedora"
[2025-10-13 03:32:00] VERSION_ID="7"
[2025-10-13 03:32:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:32:00] ANSI_COLOR="0;31"
[2025-10-13 03:32:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:32:00] HOME_URL="https://www.centos.org/"
[2025-10-13 03:32:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:32:00] 
[2025-10-13 03:32:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:32:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:32:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:32:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:32:00] 
[2025-10-13 03:32:00] 2025-10-13 07:30:51,305 | INFO     | ***************************************
[2025-10-13 03:32:00] 2025-10-13 07:30:51,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:32:00] 2025-10-13 07:30:51,937 | INFO     | sufficient remaining disk space (75002544128 B)
[2025-10-13 03:32:00] 2025-10-13 07:30:51,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:32:00] 2025-10-13 07:30:51,938 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:32:00] 2025-10-13 07:30:51,938 | INFO     | update_server=False
[2025-10-13 03:32:00] 2025-10-13 07:30:51,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:32:00] 2025-10-13 07:30:51,957 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:32:00] 2025-10-13 07:30:51,958 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:32:00] 2025-10-13 07:30:51,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:32:00] 2025-10-13 07:30:51,958 | INFO     | will abort loop
[2025-10-13 03:32:00] 2025-10-13 07:30:52,373 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:32:00] 2025-10-13 07:30:52,447 | INFO     | all data control threads have been joined
[2025-10-13 03:32:00] 2025-10-13 07:30:52,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:32:00] 2025-10-13 07:30:52,944 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:52,970 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,014 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,201 | INFO     | all payload control threads have been joined
[2025-10-13 03:32:00] 2025-10-13 07:30:53,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:32:00] 2025-10-13 07:30:53,239 | INFO     | all job control threads have been joined
[2025-10-13 03:32:00] 2025-10-13 07:30:53,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,286 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,382 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,454 | INFO     | [data] control thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,557 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,658 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:53,925 | INFO     | [job] validate thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:54,208 | INFO     | [payload] control thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:54,246 | INFO     | [job] control thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:54,256 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:54,298 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:55,233 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:30:56,755 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:32:00] 2025-10-13 07:31:22,750 | INFO     | PID=3227434 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:32:00] 2025-10-13 07:31:22,750 | INFO     | .. there are 26 such processes running
[2025-10-13 03:32:00] 2025-10-13 07:31:22,751 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:32:00] 2025-10-13 07:31:22,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:32:00] 2025-10-13 07:31:22,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:32:00] 2025-10-13 07:31:46,767 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:32:00] 2025-10-13 07:31:47,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262778234688)>', '<ExcThread(monitor, started 140261619398400)>']
[2025-10-13 03:32:00] 2025-10-13 07:31:47,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:32:00] 2025-10-13 07:31:47,076 | INFO     | [monitor] control thread has ended
[2025-10-13 03:32:00] 2025-10-13 07:31:52,063 | INFO     | all workflow threads have been joined
[2025-10-13 03:32:00] 2025-10-13 07:31:52,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:32:00] 2025-10-13 07:31:52,063 | INFO     | traces error code: 0
[2025-10-13 03:32:00] 2025-10-13 07:31:52,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:32:00] 2025-10-13 07:31:58,043 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:32:00] 2025-10-13 07:31:58,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:32:00] 2025-10-13 07:31:58,136 [wrapper] pilotpid: 3227434
[2025-10-13 03:32:00] 2025-10-13 07:31:58,162 [wrapper] Pilot exit status: 0
[2025-10-13 03:32:00] 2025-10-13 07:31:58,346 [wrapper] pandaids: 6839988316
[2025-10-13 03:32:00] 2025-10-13 07:31:58,925 [wrapper] cleanup supervisor_pilot   50703 3227435
[2025-10-13 03:32:00] 2025-10-13 07:31:58,955 [wrapper] Test setup, not cleaning
[2025-10-13 03:32:00] 2025-10-13 07:31:58,994 [wrapper] apfmon messages muted
[2025-10-13 03:32:00] 2025-10-13 07:31:59,092 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:32:00] 2025-10-13 07:31:59,137 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:32:00]  *** Error codes and diagnostics ***
[2025-10-13 03:32:00]     "exeErrorCode": 0,
[2025-10-13 03:32:00]     "exeErrorDiag": "",
[2025-10-13 03:32:00]     "pilotErrorCode": 0,
[2025-10-13 03:32:00]     "pilotErrorDiag": "",
[2025-10-13 03:32:00]  *** Listing of results directory ***
[2025-10-13 03:32:00] total 416008
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-13 03:32:00] -rwx------. 1 boincer umatlas     36292 Oct 12 08:43 runpilot2-wrapper.sh
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:43 queuedata.json
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:32:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:40 run_atlas
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:40 job.xml
[2025-10-13 03:32:00] -rw-r--r--. 2 boincer umatlas 219801625 Oct 12 21:40 EVNT.46676267._003804.pool.root.1
[2025-10-13 03:32:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:40 start_atlas.sh
[2025-10-13 03:32:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:40 shared
[2025-10-13 03:32:00] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 21:40 input.tar.gz
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:40 boinc_lockfile
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 21:40 pandaJob.out
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas    975595 Oct 12 21:41 agis_schedconf.cvmfs.json
[2025-10-13 03:32:00] drwx------. 5 boincer umatlas      4096 Oct 12 21:41 pilot3
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas 196156897 Oct 13 03:26 HITS.46676269._078409.pool.root.1
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas       531 Oct 13 03:27 boinc_task_state.xml
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas      1043 Oct 13 03:29 memory_monitor_summary.json
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas    583408 Oct 13 03:29 log.46676269._078409.job.log.tgz.1
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas      6660 Oct 13 03:29 init_data.xml
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas      7824 Oct 13 03:30 heartbeat.json
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas        95 Oct 13 03:31 pilot_heartbeat.json
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas      5010 Oct 13 03:31 pilotlog.txt
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas   2479592 Oct 13 03:31 log.46676269._078409.job.log.1
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas       357 Oct 13 03:31 output.list
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:32 runtime_log
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas   3082240 Oct 13 03:32 result.tar.gz
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:32 boinc_mmap_file
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:32 wrapper_checkpoint.txt
[2025-10-13 03:32:00] -rw-------. 1 boincer umatlas       655 Oct 13 03:32 uytMDmCbAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3tTMDmk4t5Hm.diag
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas      8696 Oct 13 03:32 runtime_log.err
[2025-10-13 03:32:00] -rw-r--r--. 1 boincer umatlas     20803 Oct 13 03:32 stderr.txt
[2025-10-13 03:32:01] HITS file was successfully produced:
[2025-10-13 03:32:01] -rw-------. 1 boincer umatlas 196156897 Oct 13 03:26 shared/HITS.pool.root.1
[2025-10-13 03:32:01]  *** Contents of shared directory: ***
[2025-10-13 03:32:01] total 409808
[2025-10-13 03:32:01] -rw-r--r--. 2 boincer umatlas 219801625 Oct 12 21:40 ATLAS.root_0
[2025-10-13 03:32:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:40 start_atlas.sh
[2025-10-13 03:32:01] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 21:40 input.tar.gz
[2025-10-13 03:32:01] -rw-------. 1 boincer umatlas 196156897 Oct 13 03:26 HITS.pool.root.1
[2025-10-13 03:32:01] -rw-------. 1 boincer umatlas   3082240 Oct 13 03:32 result.tar.gz
03:32:02 (3223058): run_atlas exited; CPU time 50980.712154
03:32:02 (3223058): called boinc_finish(0)

</stderr_txt>
]]>

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