Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:18:01 (2710829): wrapper (7.7.26015): starting
04:18:01 (2710829): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 04:18:01] Arguments: --nthreads 2
[2025-10-13 04:18:01] Threads: 2
[2025-10-13 04:18:01] Checking for CVMFS
[2025-10-13 04:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:18:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:18:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:18:01] 2.9.2.0 1499568 5159 61296 151645 3 56 30354523 36864000 0 130560 0 3113674 99.989 177995 891 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 04:18:01] CVMFS is ok
[2025-10-13 04:18:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:18:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:18:01] Further information can be found at the LHC@home message board.
[2025-10-13 04:18:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:18:01] Checking for apptainer binary...
[2025-10-13 04:18:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:18:01] Running /usr/bin/apptainer --version
[2025-10-13 04:18:01] apptainer version 1.4.1-1.1
[2025-10-13 04:18:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:18:01] thA389
[2025-10-13 04:18:01] apptainer works
[2025-10-13 04:18:01] Set ATHENA_PROC_NUMBER=2
[2025-10-13 04:18:01] Set ATHENA_CORE_NUMBER=2
[2025-10-13 04:18:01] Starting ATLAS job with PandaID=6840224876
[2025-10-13 04:18:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:25:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:25:55] 2025-10-13 04:25:23,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:25:55] 2025-10-13 04:25:23,923 | INFO     | ***************************************
[2025-10-13 06:25:55] 2025-10-13 04:25:23,923 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:25:55] 2025-10-13 04:25:23,923 | INFO     | ***************************************
[2025-10-13 06:25:55] 2025-10-13 04:25:23,923 | INFO     | 
[2025-10-13 06:25:55] 2025-10-13 04:25:23,923 | INFO     | architecture information:
[2025-10-13 06:25:55] 2025-10-13 04:25:23,923 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:25:55] 2025-10-13 04:25:23,930 | INFO     | cat /etc/os-release:
[2025-10-13 06:25:55] NAME="CentOS Linux"
[2025-10-13 06:25:55] VERSION="7 (Core)"
[2025-10-13 06:25:55] ID="centos"
[2025-10-13 06:25:55] ID_LIKE="rhel fedora"
[2025-10-13 06:25:55] VERSION_ID="7"
[2025-10-13 06:25:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:25:55] ANSI_COLOR="0;31"
[2025-10-13 06:25:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:25:55] HOME_URL="https://www.centos.org/"
[2025-10-13 06:25:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:25:55] 
[2025-10-13 06:25:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:25:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:25:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:25:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:25:55] 
[2025-10-13 06:25:55] 2025-10-13 04:25:23,930 | INFO     | ***************************************
[2025-10-13 06:25:55] 2025-10-13 04:25:24,434 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 06:25:55] 2025-10-13 04:25:24,446 | INFO     | sufficient remaining disk space (831693783040 B)
[2025-10-13 06:25:55] 2025-10-13 04:25:24,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:25:55] 2025-10-13 04:25:24,446 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:25:55] 2025-10-13 04:25:24,446 | INFO     | update_server=False
[2025-10-13 06:25:55] 2025-10-13 04:25:24,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:25:55] 2025-10-13 04:25:24,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:25:55] 2025-10-13 04:25:24,527 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:25:55] 2025-10-13 04:25:24,527 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:25:55] 2025-10-13 04:25:24,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:25:55] 2025-10-13 04:25:24,528 | INFO     | will abort loop
[2025-10-13 06:25:55] 2025-10-13 04:25:25,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:25:55] 2025-10-13 04:25:25,161 | INFO     | all payload control threads have been joined
[2025-10-13 06:25:55] 2025-10-13 04:25:25,300 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:25:55] 2025-10-13 04:25:25,345 | INFO     | all job control threads have been joined
[2025-10-13 06:25:55] 2025-10-13 04:25:25,447 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:25,451 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:25,481 | INFO     | all data control threads have been joined
[2025-10-13 06:25:55] 2025-10-13 04:25:25,533 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:25,787 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,167 | INFO     | [payload] control thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,186 | INFO     | [job] validate thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,224 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,279 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,351 | INFO     | [job] control thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,429 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,486 | INFO     | [data] control thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,747 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,902 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:26,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:25:55] 2025-10-13 04:25:27,091 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:30,923 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:25:55] 2025-10-13 04:25:31,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886278223680)>', '<ExcThread(monitor, started 139885264496384)>']
[2025-10-13 06:25:55] 2025-10-13 04:25:36,800 | INFO     | all workflow threads have been joined
[2025-10-13 06:25:55] 2025-10-13 04:25:36,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:25:55] 2025-10-13 04:25:36,801 | INFO     | traces error code: 0
[2025-10-13 06:25:55] 2025-10-13 04:25:36,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:25:55] 2025-10-13 04:25:55,065 | INFO     | PID=2714535 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:25:55] 2025-10-13 04:25:55,065 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:25:55] 2025-10-13 04:25:55,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:25:55] 2025-10-13 04:25:55,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:25:55] 2025-10-13 04:25:55,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:25:55] 2025-10-13 04:25:55,066 | INFO     | [monitor] control thread has ended
[2025-10-13 06:25:55] 2025-10-13 04:25:55,104 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:25:55] 2025-10-13 04:25:55,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:25:55] 2025-10-13 04:25:55,108 [wrapper] pilotpid: 2714535
[2025-10-13 06:25:55] 2025-10-13 04:25:55,110 [wrapper] Pilot exit status: 0
[2025-10-13 06:25:55] 2025-10-13 04:25:55,116 [wrapper] pandaids: 6840224876
[2025-10-13 06:25:55] 2025-10-13 04:25:55,126 [wrapper] cleanup supervisor_pilot 2736182 2714536
[2025-10-13 06:25:55] 2025-10-13 04:25:55,128 [wrapper] Test setup, not cleaning
[2025-10-13 06:25:55] 2025-10-13 04:25:55,130 [wrapper] apfmon messages muted
[2025-10-13 06:25:55] 2025-10-13 04:25:55,132 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:25:55] 2025-10-13 04:25:55,134 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:25:55]  *** Error codes and diagnostics ***
[2025-10-13 06:25:55]     "exeErrorCode": 0,
[2025-10-13 06:25:55]     "exeErrorDiag": "",
[2025-10-13 06:25:55]     "pilotErrorCode": 0,
[2025-10-13 06:25:55]     "pilotErrorDiag": "",
[2025-10-13 06:25:55]  *** Listing of results directory ***
[2025-10-13 06:25:55] total 418608
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc    557409 Oct 12 17:00 pilot3.tar.gz
[2025-10-13 06:25:55] -rwx------ 1 boinc boinc     36292 Oct 12 17:25 runpilot2-wrapper.sh
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc      5112 Oct 12 17:25 queuedata.json
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:25:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:18 run_atlas
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:18 job.xml
[2025-10-13 06:25:55] -rw-r--r-- 2 boinc boinc 221053570 Oct 13 04:18 EVNT.46676267._004569.pool.root.1
[2025-10-13 06:25:55] -rw-r--r-- 2 boinc boinc    569677 Oct 13 04:18 input.tar.gz
[2025-10-13 06:25:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 06:25:55] drwxrwx--x 2 boinc boinc      4096 Oct 13 04:18 shared
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:18 boinc_setup_complete
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc      6281 Oct 13 04:18 init_data.xml
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:18 boinc_lockfile
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc      2550 Oct 13 04:18 pandaJob.out
[2025-10-13 06:25:55] -rw------- 1 boinc boinc    974373 Oct 13 04:18 agis_schedconf.cvmfs.json
[2025-10-13 06:25:55] -rw------- 1 boinc boinc   1560580 Oct 13 04:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:25:55] drwx------ 5 boinc boinc      4096 Oct 13 04:18 pilot3
[2025-10-13 06:25:55] -rw------- 1 boinc boinc 200972572 Oct 13 06:24 HITS.46676269._082171.pool.root.1
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc       529 Oct 13 06:24 boinc_task_state.xml
[2025-10-13 06:25:55] -rw------- 1 boinc boinc      1017 Oct 13 06:25 memory_monitor_summary.json
[2025-10-13 06:25:55] -rw------- 1 boinc boinc    271740 Oct 13 06:25 log.46676269._082171.job.log.tgz.1
[2025-10-13 06:25:55] -rw------- 1 boinc boinc      7755 Oct 13 06:25 heartbeat.json
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:25 boinc_mmap_file
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:25 wrapper_checkpoint.txt
[2025-10-13 06:25:55] -rw------- 1 boinc boinc       747 Oct 13 06:25 pilotlog.txt
[2025-10-13 06:25:55] -rw------- 1 boinc boinc        95 Oct 13 06:25 pilot_heartbeat.json
[2025-10-13 06:25:55] -rw------- 1 boinc boinc   1098304 Oct 13 06:25 log.46676269._082171.job.log.1
[2025-10-13 06:25:55] -rw------- 1 boinc boinc       357 Oct 13 06:25 output.list
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:25 runtime_log
[2025-10-13 06:25:55] -rw------- 1 boinc boinc   1392640 Oct 13 06:25 result.tar.gz
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc      8777 Oct 13 06:25 runtime_log.err
[2025-10-13 06:25:55] -rw------- 1 boinc boinc       659 Oct 13 06:25 DSpNDmJ8CS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSHUMDm4mrPmn.diag
[2025-10-13 06:25:55] -rw-r--r-- 1 boinc boinc      9678 Oct 13 06:25 stderr.txt
[2025-10-13 06:25:55] HITS file was successfully produced:
[2025-10-13 06:25:55] -rw------- 1 boinc boinc 200972572 Oct 13 06:24 shared/HITS.pool.root.1
[2025-10-13 06:25:55]  *** Contents of shared directory: ***
[2025-10-13 06:25:55] total 414080
[2025-10-13 06:25:55] -rw-r--r-- 2 boinc boinc 221053570 Oct 13 04:18 ATLAS.root_0
[2025-10-13 06:25:55] -rw-r--r-- 2 boinc boinc    569677 Oct 13 04:18 input.tar.gz
[2025-10-13 06:25:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 06:25:55] -rw------- 1 boinc boinc 200972572 Oct 13 06:24 HITS.pool.root.1
[2025-10-13 06:25:55] -rw------- 1 boinc boinc   1392640 Oct 13 06:25 result.tar.gz
06:25:57 (2710829): run_atlas exited; CPU time 14876.771278
06:25:57 (2710829): called boinc_finish(0)

</stderr_txt>
]]>

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