Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:48:29 (2019): wrapper (7.7.26015): starting
12:48:29 (2019): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:48:29] Arguments: --nthreads 12
[2025-10-12 12:48:29] Threads: 12
[2025-10-12 12:48:29] Checking for CVMFS
[2025-10-12 12:48:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:48:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:48:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:48:29] 2.11.2.0 2933 223142 99096 151627 2 56 15401610 20275200 1 130560 2 107592995 99.983 13094962 12466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:48:29] CVMFS is ok
[2025-10-12 12:48:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:48:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:48:29] Further information can be found at the LHC@home message board.
[2025-10-12 12:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:48:29] Checking for apptainer binary...
[2025-10-12 12:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:48:29] Running /usr/bin/apptainer --version
[2025-10-12 12:48:29] apptainer version 1.3.2-1.el7
[2025-10-12 12:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:48:31] c-205-15.aglt2.org
[2025-10-12 12:48:31] apptainer works
[2025-10-12 12:48:31] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:48:31] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:48:31] Starting ATLAS job with PandaID=6840081006
[2025-10-12 12:48:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:05:17]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:05:17]  status_code=0
[2025-10-12 14:05:17]  storage_token=
[2025-10-12 14:05:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840081006/log.46676269._079378.job.log.tgz.1
[2025-10-12 14:05:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/4b/log.46676269._079378.job.log.tgz.1
[2025-10-12 14:05:17]  workdir=None
[2025-10-12 14:05:17] ]
[2025-10-12 14:05:17] 2025-10-12 18:04:35,146 | INFO     | transferring file log.46676269._079378.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840081006/log.46676269._079378.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 14:05:17] 2025-10-12 18:04:35,146 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840081006/log.46676269._079378.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._079378.job
[2025-10-12 14:05:17] 2025-10-12 18:04:35,169 | INFO     | adding to output.list: log.46676269._079378.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/4b/log.46676269._079378.job.log.tg
[2025-10-12 14:05:17] 2025-10-12 18:04:35,170 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:05:17] 2025-10-12 18:04:35,170 | INFO     | summary of transferred files:
[2025-10-12 14:05:17] 2025-10-12 18:04:35,170 | INFO     |  -- lfn=log.46676269._079378.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:05:17] 2025-10-12 18:04:35,170 | INFO     | stage-out finished correctly
[2025-10-12 14:05:17] 2025-10-12 18:04:35,926 | INFO     | time since job start (4550s) is within the limit (172800.0s)
[2025-10-12 14:05:17] 2025-10-12 18:04:36,781 | INFO     | monitor loop #340: job 0:6840081006 is in state 'finished'
[2025-10-12 14:05:17] 2025-10-12 18:04:36,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:05:17] 2025-10-12 18:04:37,931 | INFO     | time since job start (4552s) is within the limit (172800.0s)
[2025-10-12 14:05:17] 2025-10-12 18:04:38,405 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:05:17] 2025-10-12 18:04:39,284 | INFO     | monitor loop #341: job 0:6840081006 is in state 'finished'
[2025-10-12 14:05:17] 2025-10-12 18:04:39,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:05:17] 2025-10-12 18:04:39,937 | INFO     | time since job start (4554s) is within the limit (172800.0s)
[2025-10-12 14:05:17] 2025-10-12 18:04:40,642 | INFO     | job 6840081006 has state=finished
[2025-10-12 14:05:17] 2025-10-12 18:04:40,643 | INFO     | preparing for final server update for job 6840081006 in state='finished'
[2025-10-12 14:05:17] 2025-10-12 18:04:40,643 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:05:17] 2025-10-12 18:04:40,643 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:05:17] 2025-10-12 18:04:40,644 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:05:17] 2025-10-12 18:04:40,644 | INFO     | job 6840081006 has finished - writing final server update
[2025-10-12 14:05:17] 2025-10-12 18:04:40,644 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:05:17] 2025-10-12 18:04:40,645 | INFO     | executing command: lscpu
[2025-10-12 14:05:17] 2025-10-12 18:04:40,671 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:05:17] 2025-10-12 18:04:41,797 | INFO     | monitor loop #342: job 0:6840081006 is in state 'finished'
[2025-10-12 14:05:17] 2025-10-12 18:04:41,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:05:17] 2025-10-12 18:04:41,940 | INFO     | time since job start (4556s) is within the limit (172800.0s)
[2025-10-12 14:05:17] 2025-10-12 18:04:43,945 | INFO     | time since job start (4558s) is within the limit (172800.0s)
[2025-10-12 14:05:17] 2025-10-12 18:04:44,300 | INFO     | monitor loop #343: job 0:6840081006 is in state 'finished'
[2025-10-12 14:05:17] 2025-10-12 18:04:44,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,453 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 14:05:17] 2025-10-12 18:04:45,456 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.25
[2025-10-12 14:05:17] 2025-10-12 18:04:45,458 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840081006/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,459 | INFO     | extracted standard info from prmon json
[2025-10-12 14:05:17] 2025-10-12 18:04:45,459 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:05:17] 2025-10-12 18:04:45,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:05:17] 2025-10-12 18:04:45,459 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:05:17] 2025-10-12 18:04:45,459 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:05:17] 2025-10-12 18:04:45,461 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:05:17] 2025-10-12 18:04:45,461 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 14:05:17] 2025-10-12 18:04:45,461 | INFO     | sum of deviations: -7813472492.999999
[2025-10-12 14:05:17] 2025-10-12 18:04:45,461 | INFO     | mean x: 1760290102.5
[2025-10-12 14:05:17] 2025-10-12 18:04:45,461 | INFO     | mean y: 2760978.5588235296
[2025-10-12 14:05:17] 2025-10-12 18:04:45,462 | INFO     | -- intersect: 141099541567.2294
[2025-10-12 14:05:17] 2025-10-12 18:04:45,462 | INFO     | intersect: 141099541567.2294
[2025-10-12 14:05:17] 2025-10-12 18:04:45,462 | INFO     | chi2: 0.058284420208234065
[2025-10-12 14:05:17] 2025-10-12 18:04:45,462 | INFO     | -- intersect: 141099541567.2294
[2025-10-12 14:05:17] 2025-10-12 18:04:45,462 | INFO     | current memory leak: -80.16 B/s (using 68 data points, chi2=0.06)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,462 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | ..............................
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . Timing measurements:
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . get job = 0 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . initial setup = 2 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . payload setup = 7 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . stage-in = 0 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . payload execution = 4522 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . stage-out = 0 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | . log creation = 0 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,463 | INFO     | ..............................
[2025-10-12 14:05:17] 2025-10-12 18:04:45,544 | INFO     | 
[2025-10-12 14:05:17] 2025-10-12 18:04:45,544 | INFO     | job summary report
[2025-10-12 14:05:17] 2025-10-12 18:04:45,544 | INFO     | --------------------------------------------------
[2025-10-12 14:05:17] 2025-10-12 18:04:45,544 | INFO     | PanDA job id: 6840081006
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | task id: 46676269
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | errors: (none)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | pilot state: finished 
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | transexitcode: 0
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | exeerrorcode: 0
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | exeerrordiag: 
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | exitcode: 0
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | exitmsg: OK
[2025-10-12 14:05:17] 2025-10-12 18:04:45,545 | INFO     | cpuconsumptiontime: 47736 s
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | nevents: 400
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | neventsw: 0
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | pid: 12237
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | pgrp: 12237
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | corecount: 12
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | event service: False
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 4532: 2375308, 4533: 2384306, 4537: 2384490, 4544: 2384684}
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | --------------------------------------------------
[2025-10-12 14:05:17] 2025-10-12 18:04:45,546 | INFO     | 
[2025-10-12 14:05:17] 2025-10-12 18:04:45,547 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:05:17] 2025-10-12 18:04:45,568 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,569 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,569 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:05:17] 2025-10-12 18:04:45,572 | INFO     | job 6840081006 has completed (purged errors)
[2025-10-12 14:05:17] 2025-10-12 18:04:45,572 | INFO     | overall cleanup function is called
[2025-10-12 14:05:17] 2025-10-12 18:04:46,580 | INFO     | --- collectZombieJob: --- 10, [12237]
[2025-10-12 14:05:17] 2025-10-12 18:04:46,580 | INFO     | zombie collector waiting for pid 12237
[2025-10-12 14:05:17] 2025-10-12 18:04:46,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:05:17] 2025-10-12 18:04:46,581 | INFO     | collected zombie processes
[2025-10-12 14:05:17] 2025-10-12 18:04:46,581 | INFO     | will attempt to kill all subprocesses of pid=12237
[2025-10-12 14:05:17] 2025-10-12 18:04:46,673 | INFO     | process IDs to be killed: [12237] (in reverse order)
[2025-10-12 14:05:17] 2025-10-12 18:04:46,722 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:05:17] 2025-10-12 18:04:46,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:05:17] 2025-10-12 18:04:46,726 | INFO     | did not find any defunct processes belonging to 12237
[2025-10-12 14:05:17] 2025-10-12 18:04:46,729 | INFO     | did not find any defunct processes belonging to 12237
[2025-10-12 14:05:17] 2025-10-12 18:04:46,729 | INFO     | ready for new job
[2025-10-12 14:05:17] 2025-10-12 18:04:46,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:05:17] 2025-10-12 18:04:46,731 | INFO     | ***************************************
[2025-10-12 14:05:17] 2025-10-12 18:04:46,731 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:05:17] 2025-10-12 18:04:46,731 | INFO     | ***************************************
[2025-10-12 14:05:17] 2025-10-12 18:04:46,731 | INFO     | 
[2025-10-12 14:05:17] 2025-10-12 18:04:46,732 | INFO     | architecture information:
[2025-10-12 14:05:17] 2025-10-12 18:04:46,732 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:05:17] 2025-10-12 18:04:46,747 | INFO     | cat /etc/os-release:
[2025-10-12 14:05:17] NAME="CentOS Linux"
[2025-10-12 14:05:17] VERSION="7 (Core)"
[2025-10-12 14:05:17] ID="centos"
[2025-10-12 14:05:17] ID_LIKE="rhel fedora"
[2025-10-12 14:05:17] VERSION_ID="7"
[2025-10-12 14:05:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:05:17] ANSI_COLOR="0;31"
[2025-10-12 14:05:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:05:17] HOME_URL="https://www.centos.org/"
[2025-10-12 14:05:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:05:17] 
[2025-10-12 14:05:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:05:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:05:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:05:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:05:17] 
[2025-10-12 14:05:17] 2025-10-12 18:04:46,747 | INFO     | ***************************************
[2025-10-12 14:05:17] 2025-10-12 18:04:47,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:05:17] 2025-10-12 18:04:47,268 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-12 14:05:17] 2025-10-12 18:04:47,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:05:17] 2025-10-12 18:04:47,268 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:05:17] 2025-10-12 18:04:47,268 | INFO     | update_server=False
[2025-10-12 14:05:17] 2025-10-12 18:04:47,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:05:17] 2025-10-12 18:04:47,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:05:17] 2025-10-12 18:04:47,380 | INFO     | all data control threads have been joined
[2025-10-12 14:05:17] 2025-10-12 18:04:47,807 | INFO     | all payload control threads have been joined
[2025-10-12 14:05:17] 2025-10-12 18:04:47,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:05:17] 2025-10-12 18:04:47,808 | INFO     | aborting loop
[2025-10-12 14:05:17] 2025-10-12 18:04:48,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:05:17] 2025-10-12 18:04:48,274 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:48,275 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:48,362 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:48,385 | INFO     | [data] control thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:48,398 | INFO     | all job control threads have been joined
[2025-10-12 14:05:17] 2025-10-12 18:04:48,765 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:48,812 | INFO     | [payload] control thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:48,813 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:49,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:05:17] 2025-10-12 18:04:49,152 | INFO     | [job] validate thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:49,400 | INFO     | [job] control thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:49,409 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:49,430 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:49,753 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:49,826 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:50,275 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:52,293 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:05:17] 2025-10-12 18:04:53,013 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:04:58,126 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:05:17] 2025-10-12 18:04:59,131 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:05:17] 2025-10-12 18:05:00,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013799089984)>', '<ExcThread(monitor, started 140012830054144)>']
[2025-10-12 14:05:17] 2025-10-12 18:05:05,705 | INFO     | all workflow threads have been joined
[2025-10-12 14:05:17] 2025-10-12 18:05:05,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:05:17] 2025-10-12 18:05:05,705 | INFO     | traces error code: 0
[2025-10-12 14:05:17] 2025-10-12 18:05:05,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:05:17] 2025-10-12 18:05:17,139 | INFO     | PID=5792 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:05:17] 2025-10-12 18:05:17,140 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:05:17] 2025-10-12 18:05:17,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:05:17] 2025-10-12 18:05:17,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:05:17] 2025-10-12 18:05:17,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:05:17] 2025-10-12 18:05:17,140 | INFO     | [monitor] control thread has ended
[2025-10-12 14:05:17] 2025-10-12 18:05:17,221 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:05:17] 2025-10-12 18:05:17,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:05:17] 2025-10-12 18:05:17,229 [wrapper] pilotpid: 5792
[2025-10-12 14:05:17] 2025-10-12 18:05:17,233 [wrapper] Pilot exit status: 0
[2025-10-12 14:05:17] 2025-10-12 18:05:17,248 [wrapper] pandaids: 6840081006
[2025-10-12 14:05:17] 2025-10-12 18:05:17,283 [wrapper] cleanup supervisor_pilot  4370 5793
[2025-10-12 14:05:17] 2025-10-12 18:05:17,287 [wrapper] Test setup, not cleaning
[2025-10-12 14:05:17] 2025-10-12 18:05:17,290 [wrapper] apfmon messages muted
[2025-10-12 14:05:17] 2025-10-12 18:05:17,294 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:05:17] 2025-10-12 18:05:17,297 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:05:17]  *** Error codes and diagnostics ***
[2025-10-12 14:05:17]     "exeErrorCode": 0,
[2025-10-12 14:05:17]     "exeErrorDiag": "",
[2025-10-12 14:05:17]     "pilotErrorCode": 0,
[2025-10-12 14:05:17]     "pilotErrorDiag": "",
[2025-10-12 14:05:17]  *** Listing of results directory ***
[2025-10-12 14:05:17] total 416100
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:22 pilot3.tar.gz
[2025-10-12 14:05:17] -rwx------ 1 boincer umatlas     36292 Oct 12 09:22 runpilot2-wrapper.sh
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:22 queuedata.json
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:05:17] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:48 run_atlas
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:48 job.xml
[2025-10-12 14:05:17] -rw-r--r-- 2 boincer umatlas 223201035 Oct 12 12:48 EVNT.46676267._003862.pool.root.1
[2025-10-12 14:05:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:48 start_atlas.sh
[2025-10-12 14:05:17] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:48 shared
[2025-10-12 14:05:17] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 12:48 input.tar.gz
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:48 boinc_lockfile
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 12:48 pandaJob.out
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas    975528 Oct 12 12:48 agis_schedconf.cvmfs.json
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas   1560580 Oct 12 12:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:05:17] drwx------ 5 boincer umatlas      4096 Oct 12 12:48 pilot3
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 14:02 init_data.xml
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas 196894574 Oct 12 14:04 HITS.46676269._079378.pool.root.1
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:04 boinc_task_state.xml
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas      1050 Oct 12 14:04 memory_monitor_summary.json
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas    387343 Oct 12 14:04 log.46676269._079378.job.log.tgz.1
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas        95 Oct 12 14:04 pilot_heartbeat.json
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas      7858 Oct 12 14:04 heartbeat.json
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:04 boinc_mmap_file
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:04 wrapper_checkpoint.txt
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas       744 Oct 12 14:05 pilotlog.txt
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas    660540 Oct 12 14:05 log.46676269._079378.job.log.1
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas       357 Oct 12 14:05 output.list
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:05 runtime_log
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas   1064960 Oct 12 14:05 result.tar.gz
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas       659 Oct 12 14:05 tARLDmHDBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHzTMDmGauNim.diag
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 14:05 runtime_log.err
[2025-10-12 14:05:17] -rw-r--r-- 1 boincer umatlas     22080 Oct 12 14:05 stderr.txt
[2025-10-12 14:05:17] HITS file was successfully produced:
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas 196894574 Oct 12 14:04 shared/HITS.pool.root.1
[2025-10-12 14:05:17]  *** Contents of shared directory: ***
[2025-10-12 14:05:17] total 411872
[2025-10-12 14:05:17] -rw-r--r-- 2 boincer umatlas 223201035 Oct 12 12:48 ATLAS.root_0
[2025-10-12 14:05:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:48 start_atlas.sh
[2025-10-12 14:05:17] -rw-r--r-- 2 boincer umatlas    569672 Oct 12 12:48 input.tar.gz
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas 196894574 Oct 12 14:04 HITS.pool.root.1
[2025-10-12 14:05:17] -rw------- 1 boincer umatlas   1064960 Oct 12 14:05 result.tar.gz
14:05:19 (2019): run_atlas exited; CPU time 47709.270558
14:05:19 (2019): called boinc_finish(0)

</stderr_txt>
]]>

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