Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:53:18 (1154746): wrapper (7.7.26015): starting
12:53:18 (1154746): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:53:18] Arguments: --nthreads 12
[2025-10-12 12:53:18] Threads: 12
[2025-10-12 12:53:18] Checking for CVMFS
[2025-10-12 12:53:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:53:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:53:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:53:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:53:18] 2.13.2.0 3683012 13052 151668 151627 3 195 37541911 40960001 6387 16776704 0 149125587 99.863 55081125 32592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 12:53:18] CVMFS is ok
[2025-10-12 12:53:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:53:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:53:18] Further information can be found at the LHC@home message board.
[2025-10-12 12:53:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:53:18] Checking for apptainer binary...
[2025-10-12 12:53:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:53:18] Running /usr/bin/apptainer --version
[2025-10-12 12:53:18] apptainer version 1.4.3-1.el9
[2025-10-12 12:53:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:53:19] c8-7-4.aglt2.org
[2025-10-12 12:53:19] apptainer works
[2025-10-12 12:53:19] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:53:19] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:53:19] Starting ATLAS job with PandaID=6839386253
[2025-10-12 12:53:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:21:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:21:56]  protocol_id=None
[2025-10-12 13:21:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 13:21:56]  replicas=None
[2025-10-12 13:21:56]  scope=mc23_13p6TeV
[2025-10-12 13:21:56]  status=None
[2025-10-12 13:21:56]  status_code=0
[2025-10-12 13:21:56]  storage_token=
[2025-10-12 13:21:56]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6839386253/log.46676269._070605.job.log.tgz.1
[2025-10-12 13:21:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/0f/log.46676269._070605.job.log.tgz.1
[2025-10-12 13:21:56]  workdir=None
[2025-10-12 13:21:56] ]
[2025-10-12 13:21:56] 2025-10-12 17:21:08,734 | INFO     | transferring file log.46676269._070605.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6839386253/log.46676269._070605.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 13:21:56] 2025-10-12 17:21:08,734 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6839386253/log.46676269._070605.job.log.tgz.1 /tmp/boinchome/slots/7/log.46676269._070605.job
[2025-10-12 13:21:56] 2025-10-12 17:21:08,747 | INFO     | adding to output.list: log.46676269._070605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/0f/log.46676269._070605.job.log.tg
[2025-10-12 13:21:56] 2025-10-12 17:21:08,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 13:21:56] 2025-10-12 17:21:08,747 | INFO     | summary of transferred files:
[2025-10-12 13:21:56] 2025-10-12 17:21:08,747 | INFO     |  -- lfn=log.46676269._070605.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 13:21:56] 2025-10-12 17:21:08,747 | INFO     | stage-out finished correctly
[2025-10-12 13:21:56] 2025-10-12 17:21:09,256 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 13:21:56] 2025-10-12 17:21:09,600 | INFO     | time since job start (1664s) is within the limit (172800.0s)
[2025-10-12 13:21:56] 2025-10-12 17:21:10,094 | INFO     | job 6839386253 has state=finished
[2025-10-12 13:21:56] 2025-10-12 17:21:10,094 | INFO     | preparing for final server update for job 6839386253 in state='finished'
[2025-10-12 13:21:56] 2025-10-12 17:21:10,094 | INFO     | this job has now completed (state=finished)
[2025-10-12 13:21:56] 2025-10-12 17:21:10,094 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 13:21:56] 2025-10-12 17:21:10,094 | INFO     | log transfer has been attempted: DONE
[2025-10-12 13:21:56] 2025-10-12 17:21:10,094 | INFO     | job 6839386253 has finished - writing final server update
[2025-10-12 13:21:56] 2025-10-12 17:21:10,095 | INFO     | total number of processed events: 400 (read)
[2025-10-12 13:21:56] 2025-10-12 17:21:10,095 | INFO     | executing command: lscpu
[2025-10-12 13:21:56] 2025-10-12 17:21:10,145 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 13:21:56] 2025-10-12 17:21:10,470 | INFO     | monitor loop #128: job 0:6839386253 is in state 'finished'
[2025-10-12 13:21:56] 2025-10-12 17:21:10,471 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:21:56] 2025-10-12 17:21:10,885 | INFO     | PID=1158498 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:21:56] 2025-10-12 17:21:10,885 | INFO     | .. there are 10 such processes running
[2025-10-12 13:21:56] 2025-10-12 17:21:11,885 | INFO     | time since job start (1666s) is within the limit (172800.0s)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,659 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 13:21:56] 2025-10-12 17:21:12,674 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3439.2306484374935
[2025-10-12 13:21:56] 2025-10-12 17:21:12,682 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6839386253/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | INFO     | extracted standard info from prmon json
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:21:56] 2025-10-12 17:21:12,683 | INFO     | sum of square deviations: 2474465.0
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | sum of deviations: 55396448.5
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | mean x: 1760288910.5
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | mean y: 2424247.95
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | -- intersect: -39405590808.0861
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | intersect: -39405590808.0861
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | chi2: 0.0010066145471164492
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | -- intersect: -39405590808.0861
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | current memory leak: 22.39 B/s (using 20 data points, chi2=0.00)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | could have reported an average CPU frequency of 3470 MHz (4 samples)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | ..............................
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . Timing measurements:
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . get job = 0 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . initial setup = 2 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . payload setup = 3 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . stage-in = 0 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . payload execution = 1641 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . stage-out = 0 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | . log creation = 0 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,684 | INFO     | ..............................
[2025-10-12 13:21:56] 2025-10-12 17:21:12,714 | INFO     | 
[2025-10-12 13:21:56] 2025-10-12 17:21:12,714 | INFO     | job summary report
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | --------------------------------------------------
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | PanDA job id: 6839386253
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | task id: 46676269
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | errors: (none)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | pilot state: finished 
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | transexitcode: 0
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | exeerrorcode: 0
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | exeerrordiag: 
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | exitcode: 0
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | exitmsg: OK
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | cpuconsumptiontime: 18054 s
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | nevents: 400
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | neventsw: 0
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | pid: 1165065
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | pgrp: 1165065
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | corecount: 12
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | event service: False
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | sizes: {0: 2348743, 3: 2349119, 11: 2349147, 1648: 2374015, 1649: 2383069, 1653: 2383207}
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | --------------------------------------------------
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | 
[2025-10-12 13:21:56] 2025-10-12 17:21:12,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-12 13:21:56] 2025-10-12 17:21:12,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | job 6839386253 has completed (purged errors)
[2025-10-12 13:21:56] 2025-10-12 17:21:12,728 | INFO     | overall cleanup function is called
[2025-10-12 13:21:56] 2025-10-12 17:21:13,734 | INFO     | --- collectZombieJob: --- 10, [1165065]
[2025-10-12 13:21:56] 2025-10-12 17:21:13,734 | INFO     | zombie collector waiting for pid 1165065
[2025-10-12 13:21:56] 2025-10-12 17:21:13,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:21:56] 2025-10-12 17:21:13,735 | INFO     | collected zombie processes
[2025-10-12 13:21:56] 2025-10-12 17:21:13,735 | INFO     | will attempt to kill all subprocesses of pid=1165065
[2025-10-12 13:21:56] 2025-10-12 17:21:13,974 | INFO     | process IDs to be killed: [1165065] (in reverse order)
[2025-10-12 13:21:56] 2025-10-12 17:21:14,059 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:21:56] 2025-10-12 17:21:14,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:21:56] 2025-10-12 17:21:14,070 | INFO     | did not find any defunct processes belonging to 1165065
[2025-10-12 13:21:56] 2025-10-12 17:21:14,078 | INFO     | did not find any defunct processes belonging to 1165065
[2025-10-12 13:21:56] 2025-10-12 17:21:14,078 | INFO     | ready for new job
[2025-10-12 13:21:56] 2025-10-12 17:21:14,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:21:56] 2025-10-12 17:21:14,079 | INFO     | ***************************************
[2025-10-12 13:21:56] 2025-10-12 17:21:14,079 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:21:56] 2025-10-12 17:21:14,079 | INFO     | ***************************************
[2025-10-12 13:21:56] 2025-10-12 17:21:14,079 | INFO     | 
[2025-10-12 13:21:56] 2025-10-12 17:21:14,094 | INFO     | architecture information:
[2025-10-12 13:21:56] 2025-10-12 17:21:14,095 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:21:56] 2025-10-12 17:21:14,104 | INFO     | cat /etc/os-release:
[2025-10-12 13:21:56] NAME="CentOS Linux"
[2025-10-12 13:21:56] VERSION="7 (Core)"
[2025-10-12 13:21:56] ID="centos"
[2025-10-12 13:21:56] ID_LIKE="rhel fedora"
[2025-10-12 13:21:56] VERSION_ID="7"
[2025-10-12 13:21:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:21:56] ANSI_COLOR="0;31"
[2025-10-12 13:21:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:21:56] HOME_URL="https://www.centos.org/"
[2025-10-12 13:21:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:21:56] 
[2025-10-12 13:21:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:21:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:21:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:21:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:21:56] 
[2025-10-12 13:21:56] 2025-10-12 17:21:14,104 | INFO     | ***************************************
[2025-10-12 13:21:56] 2025-10-12 17:21:14,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | INFO     | sufficient remaining disk space (167749091328 B)
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | INFO     | update_server=False
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:21:56] 2025-10-12 17:21:14,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:21:56] 2025-10-12 17:21:14,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:21:56] 2025-10-12 17:21:14,620 | INFO     | aborting loop
[2025-10-12 13:21:56] 2025-10-12 17:21:15,045 | INFO     | all data control threads have been joined
[2025-10-12 13:21:56] 2025-10-12 17:21:15,120 | INFO     | all payload control threads have been joined
[2025-10-12 13:21:56] 2025-10-12 17:21:15,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:21:56] 2025-10-12 17:21:15,624 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:15,625 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:15,626 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:15,992 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,046 | INFO     | [data] control thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,115 | INFO     | [job] validate thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,124 | INFO     | [payload] control thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,179 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,245 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,245 | INFO     | all job control threads have been joined
[2025-10-12 13:21:56] 2025-10-12 17:21:16,346 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,578 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:16,625 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:17,119 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:17,251 | INFO     | [job] control thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:19,296 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:25,266 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:21:56] 2025-10-12 17:21:26,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:21:56] 2025-10-12 17:21:27,601 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:21:56] 2025-10-12 17:21:29,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032412718912)>', '<ExcThread(monitor, started 140031704430336)>']
[2025-10-12 13:21:56] 2025-10-12 17:21:34,097 | INFO     | all workflow threads have been joined
[2025-10-12 13:21:56] 2025-10-12 17:21:34,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:21:56] 2025-10-12 17:21:34,097 | INFO     | traces error code: 0
[2025-10-12 13:21:56] 2025-10-12 17:21:34,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | INFO     | PID=1158498 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | INFO     | .. there are 10 such processes running
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 13:21:56] 2025-10-12 17:21:45,296 | INFO     | [monitor] control thread has ended
[2025-10-12 13:21:56] 2025-10-12 17:21:45,359 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:21:56] 2025-10-12 17:21:45,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:21:56] 2025-10-12 17:21:45,362 [wrapper] pilotpid: 1158498
[2025-10-12 13:21:56] 2025-10-12 17:21:45,363 [wrapper] Pilot exit status: 0
[2025-10-12 13:21:56] 2025-10-12 17:21:45,368 [wrapper] pandaids: 6839386253
[2025-10-12 13:21:56] 2025-10-12 17:21:45,431 [wrapper] cleanup supervisor_pilot 1225196 1158499
[2025-10-12 13:21:56] 2025-10-12 17:21:45,434 [wrapper] Test setup, not cleaning
[2025-10-12 13:21:56] 2025-10-12 17:21:45,435 [wrapper] apfmon messages muted
[2025-10-12 13:21:56] 2025-10-12 17:21:45,436 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:21:56] 2025-10-12 17:21:45,437 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:21:56]  *** Error codes and diagnostics ***
[2025-10-12 13:21:56]     "exeErrorCode": 0,
[2025-10-12 13:21:56]     "exeErrorDiag": "",
[2025-10-12 13:21:56]     "pilotErrorCode": 0,
[2025-10-12 13:21:56]     "pilotErrorDiag": "",
[2025-10-12 13:21:56]  *** Listing of results directory ***
[2025-10-12 13:21:56] total 409012
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:08 queuedata.json
[2025-10-12 13:21:56] -rwx------. 1 boincer umatlas     36292 Oct 12 00:09 runpilot2-wrapper.sh
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:21:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:53 run_atlas
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:53 job.xml
[2025-10-12 13:21:56] -rw-r--r--. 2 boincer umatlas 221814616 Oct 12 12:53 EVNT.46676267._003244.pool.root.1
[2025-10-12 13:21:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:53 start_atlas.sh
[2025-10-12 13:21:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:53 shared
[2025-10-12 13:21:56] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 12:53 input.tar.gz
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:53 boinc_lockfile
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:53 pandaJob.out
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas    975528 Oct 12 12:53 agis_schedconf.cvmfs.json
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:21:56] drwx------. 5 boincer umatlas      4096 Oct 12 12:53 pilot3
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas      7163 Oct 12 13:10 init_data.xml
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas       529 Oct 12 13:20 boinc_task_state.xml
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas 191897327 Oct 12 13:20 HITS.46676269._070605.pool.root.1
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas        95 Oct 12 13:21 pilot_heartbeat.json
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas      1029 Oct 12 13:21 memory_monitor_summary.json
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas    329266 Oct 12 13:21 log.46676269._070605.job.log.tgz.1
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas      7770 Oct 12 13:21 heartbeat.json
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas       893 Oct 12 13:21 pilotlog.txt
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas    278821 Oct 12 13:21 log.46676269._070605.job.log.1
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas       357 Oct 12 13:21 output.list
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:21 runtime_log
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas    624640 Oct 12 13:21 result.tar.gz
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 13:21 runtime_log.err
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas       649 Oct 12 13:21 g3NLDmWZ2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPYiNDmiN5iTm.diag
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas        27 Oct 12 13:21 wrapper_checkpoint.txt
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 13:21 boinc_mmap_file
[2025-10-12 13:21:56] -rw-r--r--. 1 boincer umatlas     21773 Oct 12 13:21 stderr.txt
[2025-10-12 13:21:56] HITS file was successfully produced:
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas 191897327 Oct 12 13:20 shared/HITS.pool.root.1
[2025-10-12 13:21:56]  *** Contents of shared directory: ***
[2025-10-12 13:21:56] total 405212
[2025-10-12 13:21:56] -rw-r--r--. 2 boincer umatlas 221814616 Oct 12 12:53 ATLAS.root_0
[2025-10-12 13:21:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:53 start_atlas.sh
[2025-10-12 13:21:56] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 12:53 input.tar.gz
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas 191897327 Oct 12 13:20 HITS.pool.root.1
[2025-10-12 13:21:56] -rw-------. 1 boincer umatlas    624640 Oct 12 13:21 result.tar.gz
13:21:57 (1154746): run_atlas exited; CPU time 18084.062393
13:21:57 (1154746): called boinc_finish(0)

</stderr_txt>
]]>

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