Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:53:05 (24407): wrapper (7.7.26015): starting
12:53:05 (24407): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:53:05] Arguments: --nthreads 8
[2025-10-12 12:53:05] Threads: 8
[2025-10-12 12:53:05] Checking for CVMFS
[2025-10-12 12:53:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:53:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:53:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:53:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:53:05] 2.11.2.0 23418 11929 104900 151627 0 60 13871237 18432001 1025 130560 0 17682983 99.996 396198 34836 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:53:05] CVMFS is ok
[2025-10-12 12:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:53:05] Further information can be found at the LHC@home message board.
[2025-10-12 12:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:53:05] Checking for apptainer binary...
[2025-10-12 12:53:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:53:05] Running /usr/bin/apptainer --version
[2025-10-12 12:53:05] apptainer version 1.3.2-1.el7
[2025-10-12 12:53:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:53:05] c-206-24.aglt2.org
[2025-10-12 12:53:05] apptainer works
[2025-10-12 12:53:05] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:53:05] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:53:05] Starting ATLAS job with PandaID=6840082228
[2025-10-12 12:53:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:53:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:53:39] 2025-10-12 19:53:01,875 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,876 | INFO     | sum of deviations: 8928220774.999996
[2025-10-12 15:53:39] 2025-10-12 19:53:01,876 | INFO     | mean x: 1760293387.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,876 | INFO     | mean y: 2456797.175141243
[2025-10-12 15:53:39] 2025-10-12 19:53:01,876 | INFO     | -- intersect: -9137951962.36386
[2025-10-12 15:53:39] 2025-10-12 19:53:01,876 | INFO     | intersect: -9137951962.36386
[2025-10-12 15:53:39] 2025-10-12 19:53:01,877 | INFO     | chi2: 2.0145143887211456
[2025-10-12 15:53:39] 2025-10-12 19:53:01,877 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,878 | INFO     | sum of deviations: 20056174628.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,878 | INFO     | mean x: 1760293234.5
[2025-10-12 15:53:39] 2025-10-12 19:53:01,878 | INFO     | mean y: 2468491.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,878 | INFO     | -- intersect: -22373613141.184887
[2025-10-12 15:53:39] 2025-10-12 19:53:01,878 | INFO     | intersect: -22373613141.184887
[2025-10-12 15:53:39] 2025-10-12 19:53:01,878 | INFO     | chi2: 1.2375498492036134
[2025-10-12 15:53:39] 2025-10-12 19:53:01,879 | INFO     | current chi2=1.2375498492036134 (change=38.56832911532416 %)
[2025-10-12 15:53:39] 2025-10-12 19:53:01,879 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | sum of deviations: 19307376387.000004
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | mean x: 1760293082.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | mean y: 2467636.2874251497
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | -- intersect: -23531544891.5635
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | intersect: -23531544891.5635
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | chi2: 1.2385051679613468
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | current chi2=1.2385051679613468 (change=-0.07719436581468815 %)
[2025-10-12 15:53:39] 2025-10-12 19:53:01,880 | INFO     | right removable region: 166
[2025-10-12 15:53:39] 2025-10-12 19:53:01,881 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,881 | INFO     | sum of deviations: -13875683267.499996
[2025-10-12 15:53:39] 2025-10-12 19:53:01,882 | INFO     | mean x: 1760293539.5
[2025-10-12 15:53:39] 2025-10-12 19:53:01,882 | INFO     | mean y: 2481017.6918604653
[2025-10-12 15:53:39] 2025-10-12 19:53:01,882 | INFO     | -- intersect: 15483173674.74846
[2025-10-12 15:53:39] 2025-10-12 19:53:01,882 | INFO     | intersect: 15483173674.74846
[2025-10-12 15:53:39] 2025-10-12 19:53:01,882 | INFO     | chi2: 0.8228217554340554
[2025-10-12 15:53:39] 2025-10-12 19:53:01,882 | INFO     | current chi2=0.8228217554340554 (change=59.155329937534006 %)
[2025-10-12 15:53:39] 2025-10-12 19:53:01,883 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,883 | INFO     | sum of deviations: -12524973779.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,883 | INFO     | mean x: 1760293692.0
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | mean y: 2479452.904191617
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | -- intersect: 15269338401.673004
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | intersect: 15269338401.673004
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | chi2: 0.8201606021995678
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | current chi2=0.8201606021995678 (change=0.3234179476797943 %)
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | left removable region: 20
[2025-10-12 15:53:39] 2025-10-12 19:53:01,884 | INFO     | sum of square deviations: 964976232.5
[2025-10-12 15:53:39] 2025-10-12 19:53:01,885 | INFO     | sum of deviations: 3567608485.0000005
[2025-10-12 15:53:39] 2025-10-12 19:53:01,885 | INFO     | mean x: 1760293661.5
[2025-10-12 15:53:39] 2025-10-12 19:53:01,885 | INFO     | mean y: 2484986.342465753
[2025-10-12 15:53:39] 2025-10-12 19:53:01,885 | INFO     | -- intersect: -6505487325.66898
[2025-10-12 15:53:39] 2025-10-12 19:53:01,886 | INFO     | intersect: -6505487325.66898
[2025-10-12 15:53:39] 2025-10-12 19:53:01,886 | INFO     | chi2: 0.00022207392986778543
[2025-10-12 15:53:39] 2025-10-12 19:53:01,886 | INFO     | -- intersect: -6505487325.66898
[2025-10-12 15:53:39] 2025-10-12 19:53:01,886 | INFO     | current memory leak: 3.70 B/s (using 146 data points, chi2=0.00)
[2025-10-12 15:53:39] 2025-10-12 19:53:01,886 | INFO     | could have reported an average CPU frequency of 2426 MHz (9 samples)
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | ..............................
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . Timing measurements:
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . get job = 0 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . initial setup = 2 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . payload setup = 4 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . stage-in = 0 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . payload execution = 10754 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . stage-out = 0 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | . log creation = 0 s
[2025-10-12 15:53:39] 2025-10-12 19:53:01,887 | INFO     | ..............................
[2025-10-12 15:53:39] 2025-10-12 19:53:02,248 | INFO     | 
[2025-10-12 15:53:39] 2025-10-12 19:53:02,248 | INFO     | job summary report
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | --------------------------------------------------
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | PanDA job id: 6840082228
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | task id: 46676269
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | errors: (none)
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | pilot state: finished 
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | transexitcode: 0
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | exeerrorcode: 0
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | exeerrordiag: 
[2025-10-12 15:53:39] 2025-10-12 19:53:02,249 | INFO     | exitcode: 0
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | exitmsg: OK
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | cpuconsumptiontime: 81762 s
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | nevents: 400
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | neventsw: 0
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | pid: 13354
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | pgrp: 13354
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | corecount: 8
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | event service: False
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | sizes: {0: 2348856, 1: 2348856, 4: 2349146, 11: 2349174, 10762: 2378248, 10763: 2387246, 10766: 2387430, 10771: 2387688}
[2025-10-12 15:53:39] 2025-10-12 19:53:02,250 | INFO     | --------------------------------------------------
[2025-10-12 15:53:39] 2025-10-12 19:53:02,251 | INFO     | 
[2025-10-12 15:53:39] 2025-10-12 19:53:02,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:53:39] 2025-10-12 19:53:02,266 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,266 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,266 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,267 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:53:39] 2025-10-12 19:53:02,268 | INFO     | job 6840082228 has completed (purged errors)
[2025-10-12 15:53:39] 2025-10-12 19:53:02,269 | INFO     | overall cleanup function is called
[2025-10-12 15:53:39] 2025-10-12 19:53:03,276 | INFO     | --- collectZombieJob: --- 10, [13354]
[2025-10-12 15:53:39] 2025-10-12 19:53:03,276 | INFO     | zombie collector waiting for pid 13354
[2025-10-12 15:53:39] 2025-10-12 19:53:03,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:53:39] 2025-10-12 19:53:03,276 | INFO     | collected zombie processes
[2025-10-12 15:53:39] 2025-10-12 19:53:03,276 | INFO     | will attempt to kill all subprocesses of pid=13354
[2025-10-12 15:53:39] 2025-10-12 19:53:03,384 | INFO     | process IDs to be killed: [13354] (in reverse order)
[2025-10-12 15:53:39] 2025-10-12 19:53:03,424 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:53:39] 2025-10-12 19:53:03,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:53:39] 2025-10-12 19:53:03,426 | INFO     | did not find any defunct processes belonging to 13354
[2025-10-12 15:53:39] 2025-10-12 19:53:03,429 | INFO     | did not find any defunct processes belonging to 13354
[2025-10-12 15:53:39] 2025-10-12 19:53:03,429 | INFO     | ready for new job
[2025-10-12 15:53:39] 2025-10-12 19:53:03,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:53:39] 2025-10-12 19:53:03,431 | INFO     | ***************************************
[2025-10-12 15:53:39] 2025-10-12 19:53:03,431 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:53:39] 2025-10-12 19:53:03,431 | INFO     | ***************************************
[2025-10-12 15:53:39] 2025-10-12 19:53:03,431 | INFO     | 
[2025-10-12 15:53:39] 2025-10-12 19:53:03,432 | INFO     | architecture information:
[2025-10-12 15:53:39] 2025-10-12 19:53:03,432 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:53:39] 2025-10-12 19:53:03,442 | INFO     | cat /etc/os-release:
[2025-10-12 15:53:39] NAME="CentOS Linux"
[2025-10-12 15:53:39] VERSION="7 (Core)"
[2025-10-12 15:53:39] ID="centos"
[2025-10-12 15:53:39] ID_LIKE="rhel fedora"
[2025-10-12 15:53:39] VERSION_ID="7"
[2025-10-12 15:53:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:53:39] ANSI_COLOR="0;31"
[2025-10-12 15:53:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:53:39] HOME_URL="https://www.centos.org/"
[2025-10-12 15:53:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:53:39] 
[2025-10-12 15:53:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:53:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:53:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:53:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:53:39] 
[2025-10-12 15:53:39] 2025-10-12 19:53:03,442 | INFO     | ***************************************
[2025-10-12 15:53:39] 2025-10-12 19:53:03,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:53:39] 2025-10-12 19:53:03,996 | INFO     | sufficient remaining disk space (27944550400 B)
[2025-10-12 15:53:39] 2025-10-12 19:53:03,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:53:39] 2025-10-12 19:53:03,996 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:53:39] 2025-10-12 19:53:03,996 | INFO     | update_server=False
[2025-10-12 15:53:39] 2025-10-12 19:53:03,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:53:39] 2025-10-12 19:53:03,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:53:39] 2025-10-12 19:53:04,404 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 15:53:39] 2025-10-12 19:53:04,404 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 15:53:39] 2025-10-12 19:53:04,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:53:39] 2025-10-12 19:53:04,404 | INFO     | will abort loop
[2025-10-12 15:53:39] 2025-10-12 19:53:04,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:53:39] 2025-10-12 19:53:04,612 | INFO     | all job control threads have been joined
[2025-10-12 15:53:39] 2025-10-12 19:53:04,613 | INFO     | all data control threads have been joined
[2025-10-12 15:53:39] 2025-10-12 19:53:05,001 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,110 | INFO     | all payload control threads have been joined
[2025-10-12 15:53:39] 2025-10-12 19:53:05,115 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,116 | INFO     | [job] validate thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,409 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,459 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,513 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,618 | INFO     | [job] control thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,618 | INFO     | [data] control thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:05,709 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:06,115 | INFO     | [payload] control thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:06,237 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:06,588 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:06,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:53:39] 2025-10-12 19:53:07,988 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:08,002 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:13,440 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-10-12 15:53:39] 2025-10-12 19:53:15,036 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:53:39] 2025-10-12 19:53:16,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:53:39] 2025-10-12 19:53:32,932 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:53:39] 2025-10-12 19:53:33,777 | INFO     | PID=2967 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 15:53:39] 2025-10-12 19:53:33,778 | INFO     | .. there are 3 such processes running
[2025-10-12 15:53:39] 2025-10-12 19:53:33,778 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:53:39] 2025-10-12 19:53:33,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:53:39] 2025-10-12 19:53:33,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:53:39] 2025-10-12 19:53:34,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738093487936)>', '<ExcThread(monitor, started 139737423668992)>']
[2025-10-12 15:53:39] 2025-10-12 19:53:34,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:53:39] 2025-10-12 19:53:34,784 | INFO     | [monitor] control thread has ended
[2025-10-12 15:53:39] 2025-10-12 19:53:39,127 | INFO     | all workflow threads have been joined
[2025-10-12 15:53:39] 2025-10-12 19:53:39,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:53:39] 2025-10-12 19:53:39,128 | INFO     | traces error code: 0
[2025-10-12 15:53:39] 2025-10-12 19:53:39,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:53:39] 2025-10-12 19:53:39,219 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:53:39] 2025-10-12 19:53:39,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:53:39] 2025-10-12 19:53:39,223 [wrapper] pilotpid: 2967
[2025-10-12 15:53:39] 2025-10-12 19:53:39,225 [wrapper] Pilot exit status: 0
[2025-10-12 15:53:39] 2025-10-12 19:53:39,234 [wrapper] pandaids: 6840082228
[2025-10-12 15:53:39] 2025-10-12 19:53:39,263 [wrapper] cleanup supervisor_pilot 23172 2968
[2025-10-12 15:53:39] 2025-10-12 19:53:39,265 [wrapper] Test setup, not cleaning
[2025-10-12 15:53:39] 2025-10-12 19:53:39,268 [wrapper] apfmon messages muted
[2025-10-12 15:53:39] 2025-10-12 19:53:39,270 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:53:39] 2025-10-12 19:53:39,272 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:53:39]  *** Error codes and diagnostics ***
[2025-10-12 15:53:39]     "exeErrorCode": 0,
[2025-10-12 15:53:39]     "exeErrorDiag": "",
[2025-10-12 15:53:39]     "pilotErrorCode": 0,
[2025-10-12 15:53:39]     "pilotErrorDiag": "",
[2025-10-12 15:53:39]  *** Listing of results directory ***
[2025-10-12 15:53:39] total 407708
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:45 pilot3.tar.gz
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:53 queuedata.json
[2025-10-12 15:53:39] -rwx------ 1 boincer umatlas     36292 Oct 12 09:54 runpilot2-wrapper.sh
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:53:39] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:53 run_atlas
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:53 job.xml
[2025-10-12 15:53:39] -rw-r--r-- 2 boincer umatlas 218585656 Oct 12 12:53 EVNT.46676267._004048.pool.root.1
[2025-10-12 15:53:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:53 start_atlas.sh
[2025-10-12 15:53:39] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:53 shared
[2025-10-12 15:53:39] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 12:53 input.tar.gz
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:53 boinc_lockfile
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 12:53 pandaJob.out
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas    975528 Oct 12 12:53 agis_schedconf.cvmfs.json
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas   1560580 Oct 12 12:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:53:39] drwx------ 5 boincer umatlas      4096 Oct 12 12:53 pilot3
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 15:46 init_data.xml
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas 191164791 Oct 12 15:52 HITS.46676269._080043.pool.root.1
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:52 boinc_task_state.xml
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas      1054 Oct 12 15:52 memory_monitor_summary.json
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas    407426 Oct 12 15:52 log.46676269._080043.job.log.tgz.1
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas        95 Oct 12 15:53 pilot_heartbeat.json
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas      7855 Oct 12 15:53 heartbeat.json
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:53 boinc_mmap_file
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:53 wrapper_checkpoint.txt
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas      5078 Oct 12 15:53 pilotlog.txt
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas   1512902 Oct 12 15:53 log.46676269._080043.job.log.1
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas       357 Oct 12 15:53 output.list
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:53 runtime_log
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas   1935360 Oct 12 15:53 result.tar.gz
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 15:53 runtime_log.err
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas       661 Oct 12 15:53 6lbLDmihBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj7jNDmZOXThm.diag
[2025-10-12 15:53:39] -rw-r--r-- 1 boincer umatlas     20904 Oct 12 15:53 stderr.txt
[2025-10-12 15:53:39] HITS file was successfully produced:
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas 191164791 Oct 12 15:52 shared/HITS.pool.root.1
[2025-10-12 15:53:39]  *** Contents of shared directory: ***
[2025-10-12 15:53:39] total 402624
[2025-10-12 15:53:39] -rw-r--r-- 2 boincer umatlas 218585656 Oct 12 12:53 ATLAS.root_0
[2025-10-12 15:53:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:53 start_atlas.sh
[2025-10-12 15:53:39] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 12:53 input.tar.gz
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas 191164791 Oct 12 15:52 HITS.pool.root.1
[2025-10-12 15:53:39] -rw------- 1 boincer umatlas   1935360 Oct 12 15:53 result.tar.gz
15:53:41 (24407): run_atlas exited; CPU time 81893.758912
15:53:41 (24407): called boinc_finish(0)

</stderr_txt>
]]>

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