Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:56:56 (3740666): wrapper (7.7.26015): starting
12:56:56 (3740666): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:56:56] Arguments: --nthreads 8
[2025-10-12 12:56:56] Threads: 8
[2025-10-12 12:56:56] Checking for CVMFS
[2025-10-12 12:56:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:56:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:56:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:56:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:56:57] 2.13.1.0 7481 77607 109380 151627 2 455 34250540 40960001 28746 16776704 0 447542496 99.779 253545523 45794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:56:57] CVMFS is ok
[2025-10-12 12:56:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:56:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:56:57] Further information can be found at the LHC@home message board.
[2025-10-12 12:56:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:56:57] Checking for apptainer binary...
[2025-10-12 12:56:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:56:57] Running /usr/bin/apptainer --version
[2025-10-12 12:56:57] apptainer version 1.4.3-1.el9
[2025-10-12 12:56:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:56:58] c-208-38.aglt2.org
[2025-10-12 12:56:58] apptainer works
[2025-10-12 12:56:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:56:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:56:58] Starting ATLAS job with PandaID=6840224801
[2025-10-12 12:56:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:33:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:33:44] 2025-10-12 18:32:50,661 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 14:33:44] 2025-10-12 18:32:50,661 | INFO     | size of work directory /tmp/boinchome/slots/6/PanDA_Pilot-6840224801: 3403936 B (within 2537553920 B limit)
[2025-10-12 14:33:44] 2025-10-12 18:32:50,662 | INFO     | pfn file=/tmp/boinchome/slots/6/PanDA_Pilot-6840224801/HITS.46676269._082096.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 14:33:44] 2025-10-12 18:32:50,662 | INFO     | total size of present files: 0 B (workdir size: 3403936 B)
[2025-10-12 14:33:44] 2025-10-12 18:32:50,662 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/6/PanDA_Pilot-6840224801/HITS.46676269._082096.pool.root.1 since it does not exist
[2025-10-12 14:33:44] 2025-10-12 18:32:51,183 | INFO     | number of running child processes to parent process 3778736: 1
[2025-10-12 14:33:44] 2025-10-12 18:32:51,186 | INFO     | maximum number of monitored processes: 6
[2025-10-12 14:33:44] 2025-10-12 18:32:51,436 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:33:44] 2025-10-12 18:32:51,620 | INFO     | time since job start (5677s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:32:52,725 | INFO     | job 6840224801 has state=finished
[2025-10-12 14:33:44] 2025-10-12 18:32:52,726 | INFO     | preparing for final server update for job 6840224801 in state='finished'
[2025-10-12 14:33:44] 2025-10-12 18:32:52,726 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:33:44] 2025-10-12 18:32:52,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:33:44] 2025-10-12 18:32:52,726 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:33:44] 2025-10-12 18:32:52,727 | INFO     | job 6840224801 has finished - writing final server update
[2025-10-12 14:33:44] 2025-10-12 18:32:52,727 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:33:44] 2025-10-12 18:32:52,738 | INFO     | executing command: lscpu
[2025-10-12 14:33:44] 2025-10-12 18:32:52,909 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:33:44] 2025-10-12 18:32:53,627 | INFO     | time since job start (5679s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:32:53,689 | INFO     | monitor loop #392: job 0:6840224801 is in state 'finished'
[2025-10-12 14:33:44] 2025-10-12 18:32:53,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:33:44] 2025-10-12 18:32:55,638 | INFO     | time since job start (5681s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:32:56,193 | INFO     | monitor loop #393: job 0:6840224801 is in state 'finished'
[2025-10-12 14:33:44] 2025-10-12 18:32:56,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:33:44] 2025-10-12 18:32:57,645 | INFO     | time since job start (5683s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:32:58,699 | INFO     | monitor loop #394: job 0:6840224801 is in state 'finished'
[2025-10-12 14:33:44] 2025-10-12 18:32:58,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:33:44] 2025-10-12 18:32:59,247 | INFO     | PID=3753673 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 14:33:44] 2025-10-12 18:32:59,247 | INFO     | .. there are 23 such processes running
[2025-10-12 14:33:44] 2025-10-12 18:33:00,248 | INFO     | time since job start (5686s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:33:01,211 | INFO     | monitor loop #395: job 0:6840224801 is in state 'finished'
[2025-10-12 14:33:44] 2025-10-12 18:33:01,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:33:44] 2025-10-12 18:33:02,256 | INFO     | time since job start (5688s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:33:03,717 | INFO     | monitor loop #396: job 0:6840224801 is in state 'finished'
[2025-10-12 14:33:44] 2025-10-12 18:33:03,718 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:33:44] 2025-10-12 18:33:04,263 | INFO     | time since job start (5690s) is within the limit (172800.0s)
[2025-10-12 14:33:44] 2025-10-12 18:33:04,838 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:33:44] 2025-10-12 18:33:04,855 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3762.5957421875014
[2025-10-12 14:33:44] 2025-10-12 18:33:04,868 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6840224801/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:33:44] 2025-10-12 18:33:04,868 | INFO     | extracted standard info from prmon json
[2025-10-12 14:33:44] 2025-10-12 18:33:04,869 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:33:44] 2025-10-12 18:33:04,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:33:44] 2025-10-12 18:33:04,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:33:44] 2025-10-12 18:33:04,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:33:44] 2025-10-12 18:33:04,870 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:33:44] 2025-10-12 18:33:04,870 | INFO     | sum of square deviations: 183747376.70238054
[2025-10-12 14:33:44] 2025-10-12 18:33:04,870 | INFO     | sum of deviations: 22508871295.273804
[2025-10-12 14:33:44] 2025-10-12 18:33:04,870 | INFO     | mean x: 1760291301.5595238
[2025-10-12 14:33:44] 2025-10-12 18:33:04,870 | INFO     | mean y: 2391009.845238095
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | -- intersect: -215631546519.3429
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | intersect: -215631546519.3429
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | chi2: 2.025959088091777
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | -- intersect: -215631546519.3429
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | current memory leak: 122.50 B/s (using 84 data points, chi2=2.03)
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | could have reported an average CPU frequency of 3737 MHz (7 samples)
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | ..............................
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . Timing measurements:
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . get job = 0 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . initial setup = 9 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . payload setup = 53 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . stage-in = 0 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . payload execution = 5536 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . stage-out = 1 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | . log creation = 0 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,871 | INFO     | ..............................
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | 
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | job summary report
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | --------------------------------------------------
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | PanDA job id: 6840224801
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | task id: 46676269
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | errors: (none)
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | pilot state: finished 
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | transexitcode: 0
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | exeerrorcode: 0
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | exeerrordiag: 
[2025-10-12 14:33:44] 2025-10-12 18:33:04,928 | INFO     | exitcode: 0
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | exitmsg: OK
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | cpuconsumptiontime: 25186 s
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | nevents: 400
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | neventsw: 0
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | pid: 3778736
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | pgrp: 3778736
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | corecount: 8
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | event service: False
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2349231, 45: 2349231, 5593: 2376007, 5594: 2376006, 5595: 2385060, 5597: 2385144, 5610: 2385338}
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | --------------------------------------------------
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | 
[2025-10-12 14:33:44] 2025-10-12 18:33:04,929 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 14:33:44] 2025-10-12 18:33:05,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | job 6840224801 has completed (purged errors)
[2025-10-12 14:33:44] 2025-10-12 18:33:05,095 | INFO     | overall cleanup function is called
[2025-10-12 14:33:44] 2025-10-12 18:33:06,106 | INFO     | --- collectZombieJob: --- 10, [3778736]
[2025-10-12 14:33:44] 2025-10-12 18:33:06,107 | INFO     | zombie collector waiting for pid 3778736
[2025-10-12 14:33:44] 2025-10-12 18:33:06,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:33:44] 2025-10-12 18:33:06,107 | INFO     | collected zombie processes
[2025-10-12 14:33:44] 2025-10-12 18:33:06,107 | INFO     | will attempt to kill all subprocesses of pid=3778736
[2025-10-12 14:33:44] 2025-10-12 18:33:06,799 | INFO     | process IDs to be killed: [3778736] (in reverse order)
[2025-10-12 14:33:44] 2025-10-12 18:33:06,957 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:33:44] 2025-10-12 18:33:06,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:33:44] 2025-10-12 18:33:06,977 | INFO     | did not find any defunct processes belonging to 3778736
[2025-10-12 14:33:44] 2025-10-12 18:33:06,996 | INFO     | did not find any defunct processes belonging to 3778736
[2025-10-12 14:33:44] 2025-10-12 18:33:06,997 | INFO     | ready for new job
[2025-10-12 14:33:44] 2025-10-12 18:33:06,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:33:44] 2025-10-12 18:33:06,998 | INFO     | ***************************************
[2025-10-12 14:33:44] 2025-10-12 18:33:06,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:33:44] 2025-10-12 18:33:06,999 | INFO     | ***************************************
[2025-10-12 14:33:44] 2025-10-12 18:33:06,999 | INFO     | 
[2025-10-12 14:33:44] 2025-10-12 18:33:07,004 | INFO     | architecture information:
[2025-10-12 14:33:44] 2025-10-12 18:33:07,004 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:33:44] 2025-10-12 18:33:07,016 | INFO     | cat /etc/os-release:
[2025-10-12 14:33:44] NAME="CentOS Linux"
[2025-10-12 14:33:44] VERSION="7 (Core)"
[2025-10-12 14:33:44] ID="centos"
[2025-10-12 14:33:44] ID_LIKE="rhel fedora"
[2025-10-12 14:33:44] VERSION_ID="7"
[2025-10-12 14:33:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:33:44] ANSI_COLOR="0;31"
[2025-10-12 14:33:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:33:44] HOME_URL="https://www.centos.org/"
[2025-10-12 14:33:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:33:44] 
[2025-10-12 14:33:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:33:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:33:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:33:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:33:44] 
[2025-10-12 14:33:44] 2025-10-12 18:33:07,016 | INFO     | ***************************************
[2025-10-12 14:33:44] 2025-10-12 18:33:07,522 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 14:33:44] 2025-10-12 18:33:07,560 | INFO     | sufficient remaining disk space (170372628480 B)
[2025-10-12 14:33:44] 2025-10-12 18:33:07,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:33:44] 2025-10-12 18:33:07,560 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:33:44] 2025-10-12 18:33:07,560 | INFO     | update_server=False
[2025-10-12 14:33:44] 2025-10-12 18:33:07,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:33:44] 2025-10-12 18:33:07,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:33:44] 2025-10-12 18:33:07,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:33:44] 2025-10-12 18:33:07,565 | INFO     | aborting loop
[2025-10-12 14:33:44] 2025-10-12 18:33:07,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:33:44] 2025-10-12 18:33:07,796 | INFO     | all data control threads have been joined
[2025-10-12 14:33:44] 2025-10-12 18:33:07,885 | INFO     | all job control threads have been joined
[2025-10-12 14:33:44] 2025-10-12 18:33:08,397 | INFO     | all payload control threads have been joined
[2025-10-12 14:33:44] 2025-10-12 18:33:08,567 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,571 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,739 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,755 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,794 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,802 | INFO     | [data] control thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,862 | INFO     | [job] validate thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:08,891 | INFO     | [job] control thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:09,406 | INFO     | [payload] control thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:09,750 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:09,928 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:09,940 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:09,941 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:09,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:33:44] 2025-10-12 18:33:09,951 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:10,952 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:11,586 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:33:44] 2025-10-12 18:33:23,702 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:33:44] 2025-10-12 18:33:25,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354894616384)>', '<ExcThread(monitor, started 140354397386496)>']
[2025-10-12 14:33:44] 2025-10-12 18:33:30,431 | INFO     | all workflow threads have been joined
[2025-10-12 14:33:44] 2025-10-12 18:33:30,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:33:44] 2025-10-12 18:33:30,432 | INFO     | traces error code: 0
[2025-10-12 14:33:44] 2025-10-12 18:33:30,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:33:44] 2025-10-12 18:33:43,369 | INFO     | PID=3753673 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:33:44] 2025-10-12 18:33:43,369 | INFO     | .. there are 23 such processes running
[2025-10-12 14:33:44] 2025-10-12 18:33:43,373 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:33:44] 2025-10-12 18:33:43,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:33:44] 2025-10-12 18:33:43,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:33:44] 2025-10-12 18:33:43,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:33:44] 2025-10-12 18:33:43,374 | INFO     | [monitor] control thread has ended
[2025-10-12 14:33:44] 2025-10-12 18:33:43,689 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:33:44] 2025-10-12 18:33:43,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:33:44] 2025-10-12 18:33:43,718 [wrapper] pilotpid: 3753673
[2025-10-12 14:33:44] 2025-10-12 18:33:43,720 [wrapper] Pilot exit status: 0
[2025-10-12 14:33:44] 2025-10-12 18:33:43,768 [wrapper] pandaids: 6840224801
[2025-10-12 14:33:44] 2025-10-12 18:33:43,871 [wrapper] cleanup supervisor_pilot 4022506 3753674
[2025-10-12 14:33:44] 2025-10-12 18:33:43,914 [wrapper] Test setup, not cleaning
[2025-10-12 14:33:44] 2025-10-12 18:33:43,924 [wrapper] apfmon messages muted
[2025-10-12 14:33:44] 2025-10-12 18:33:43,964 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:33:44] 2025-10-12 18:33:44,007 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:33:44]  *** Error codes and diagnostics ***
[2025-10-12 14:33:44]     "exeErrorCode": 0,
[2025-10-12 14:33:44]     "exeErrorDiag": "",
[2025-10-12 14:33:44]     "pilotErrorCode": 0,
[2025-10-12 14:33:44]     "pilotErrorDiag": "",
[2025-10-12 14:33:44]  *** Listing of results directory ***
[2025-10-12 14:33:44] total 407156
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:21 queuedata.json
[2025-10-12 14:33:44] -rwx------. 1 boincer umatlas     36292 Oct 12 11:22 runpilot2-wrapper.sh
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:33:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:56 run_atlas
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:56 job.xml
[2025-10-12 14:33:44] -rw-r--r--. 2 boincer umatlas 218676675 Oct 12 12:56 EVNT.46676267._004566.pool.root.1
[2025-10-12 14:33:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:56 shared
[2025-10-12 14:33:44] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 12:56 input.tar.gz
[2025-10-12 14:33:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:56 start_atlas.sh
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:56 boinc_lockfile
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:56 pandaJob.out
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas    975528 Oct 12 12:58 agis_schedconf.cvmfs.json
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:33:44] drwx------. 5 boincer umatlas      4096 Oct 12 12:58 pilot3
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 14:28 init_data.xml
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas 192142195 Oct 12 14:32 HITS.46676269._082096.pool.root.1
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas       530 Oct 12 14:32 boinc_task_state.xml
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas      1050 Oct 12 14:32 memory_monitor_summary.json
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas    333778 Oct 12 14:32 log.46676269._082096.job.log.tgz.1
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas      7814 Oct 12 14:33 heartbeat.json
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas        95 Oct 12 14:33 pilot_heartbeat.json
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas       823 Oct 12 14:33 pilotlog.txt
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas        27 Oct 12 14:33 wrapper_checkpoint.txt
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:33 boinc_mmap_file
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas    771958 Oct 12 14:33 log.46676269._082096.job.log.1
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas       357 Oct 12 14:33 output.list
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:33 runtime_log
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas   1126400 Oct 12 14:33 result.tar.gz
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 14:33 runtime_log.err
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas       657 Oct 12 14:33 nR1NDmN5CS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzQkNDmNxxXCn.diag
[2025-10-12 14:33:44] -rw-r--r--. 1 boincer umatlas     22521 Oct 12 14:33 stderr.txt
[2025-10-12 14:33:44] HITS file was successfully produced:
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas 192142195 Oct 12 14:32 shared/HITS.pool.root.1
[2025-10-12 14:33:44]  *** Contents of shared directory: ***
[2025-10-12 14:33:44] total 402872
[2025-10-12 14:33:44] -rw-r--r--. 2 boincer umatlas 218676675 Oct 12 12:56 ATLAS.root_0
[2025-10-12 14:33:44] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 12:56 input.tar.gz
[2025-10-12 14:33:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:56 start_atlas.sh
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas 192142195 Oct 12 14:32 HITS.pool.root.1
[2025-10-12 14:33:44] -rw-------. 1 boincer umatlas   1126400 Oct 12 14:33 result.tar.gz
14:33:46 (3740666): run_atlas exited; CPU time 25334.587459
14:33:46 (3740666): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN