Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:47:52 (3678839): wrapper (7.7.26015): starting
12:47:52 (3678839): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:47:52] Arguments: --nthreads 8
[2025-10-12 12:47:52] Threads: 8
[2025-10-12 12:47:52] Checking for CVMFS
[2025-10-12 12:47:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:47:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:47:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:47:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:47:54] 2.13.1.0 7481 77598 100324 151627 3 296 34241961 40960001 25339 16776704 0 447425813 99.779 253545522 45794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:47:54] CVMFS is ok
[2025-10-12 12:47:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:47:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:47:54] Further information can be found at the LHC@home message board.
[2025-10-12 12:47:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:47:54] Checking for apptainer binary...
[2025-10-12 12:47:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:47:54] Running /usr/bin/apptainer --version
[2025-10-12 12:47:54] apptainer version 1.4.3-1.el9
[2025-10-12 12:47:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:47:54] c-208-38.aglt2.org
[2025-10-12 12:47:54] apptainer works
[2025-10-12 12:47:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:47:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:47:54] Starting ATLAS job with PandaID=6840224804
[2025-10-12 12:47:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:41:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:41:05] 2025-10-12 20:40:28,665 | INFO     | monitor loop #928: job 0:6840224804 is in state 'finished'
[2025-10-12 16:41:05] 2025-10-12 20:40:28,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:41:05] 2025-10-12 20:40:28,906 | INFO     | time since job start (13931s) is within the limit (172800.0s)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,277 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 16:41:05] 2025-10-12 20:40:29,286 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3747.1692656249998
[2025-10-12 16:41:05] 2025-10-12 20:40:29,315 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6840224804/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,316 | INFO     | extracted standard info from prmon json
[2025-10-12 16:41:05] 2025-10-12 20:40:29,316 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:41:05] 2025-10-12 20:40:29,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:41:05] 2025-10-12 20:40:29,317 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:41:05] 2025-10-12 20:40:29,317 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:41:05] 2025-10-12 20:40:29,319 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:41:05] 2025-10-12 20:40:29,320 | INFO     | sum of square deviations: 3626943496.784119
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | sum of deviations: 45758024832.63437
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | mean x: 1760294633.030837
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | mean y: 2442275.7665198236
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | -- intersect: -22205680239.071857
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | intersect: -22205680239.071857
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | chi2: 3.2174638939907982
[2025-10-12 16:41:05] 2025-10-12 20:40:29,325 | INFO     | sum of square deviations: 3392513329.2792816
[2025-10-12 16:41:05] 2025-10-12 20:40:29,326 | INFO     | sum of deviations: 58522693800.88288
[2025-10-12 16:41:05] 2025-10-12 20:40:29,326 | INFO     | mean x: 1760294480.5315316
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | mean y: 2450416.373873874
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | -- intersect: -30363583519.1262
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | intersect: -30363583519.1262
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | chi2: 2.5379931999603347
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | current chi2=2.5379931999603347 (change=21.118207271867114 %)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | right removable region: 221
[2025-10-12 16:41:05] 2025-10-12 20:40:29,327 | INFO     | sum of square deviations: 3392509059.2792816
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | sum of deviations: -8417406577.648649
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | mean x: 1760294785.5315316
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | mean y: 2477349.878378378
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | -- intersect: 4370075681.209449
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | intersect: 4370075681.209449
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | chi2: 0.7787829214491099
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | current chi2=0.7787829214491099 (change=75.7951309755603 %)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,328 | INFO     | sum of square deviations: 3168400396.774207
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | sum of deviations: -15483977122.290321
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | mean x: 1760294938.032258
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | mean y: 2482118.8986175116
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | -- intersect: 8605045916.304092
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | intersect: 8605045916.304092
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | chi2: 0.7216612488259265
[2025-10-12 16:41:05] 2025-10-12 20:40:29,329 | INFO     | current chi2=0.7216612488259265 (change=7.334736169726856 %)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,330 | INFO     | left removable region: 20
[2025-10-12 16:41:05] 2025-10-12 20:40:29,330 | INFO     | sum of square deviations: 2517964592.87561
[2025-10-12 16:41:05] 2025-10-12 20:40:29,334 | INFO     | sum of deviations: 2432493846.532338
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | mean x: 1760295060.0248756
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | mean y: 2488185.2935323385
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | -- intersect: -1698054750.7378614
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | intersect: -1698054750.7378614
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | chi2: 0.008023779942504363
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | -- intersect: -1698054750.7378614
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | current memory leak: 0.97 B/s (using 201 data points, chi2=0.01)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,335 | INFO     | could have reported an average CPU frequency of 3729 MHz (11 samples)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | ..............................
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . Timing measurements:
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . get job = 0 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . initial setup = 2 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . payload setup = 12 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . stage-in = 0 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . payload execution = 13853 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . stage-out = 4 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | . log creation = 0 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,336 | INFO     | ..............................
[2025-10-12 16:41:05] 2025-10-12 20:40:29,714 | INFO     | 
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | job summary report
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | --------------------------------------------------
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | PanDA job id: 6840224804
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | task id: 46676269
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | errors: (none)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | pilot state: finished 
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | transexitcode: 0
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | exeerrorcode: 0
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | exeerrordiag: 
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | exitcode: 0
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | exitmsg: OK
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | cpuconsumptiontime: 24852 s
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | nevents: 400
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | neventsw: 0
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | pid: 3696239
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | pgrp: 3696239
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | corecount: 8
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | event service: False
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | sizes: {0: 2348856, 10: 2349118, 11: 2349146, 13870: 2380113, 13874: 2389167, 13913: 2389305}
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | --------------------------------------------------
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | 
[2025-10-12 16:41:05] 2025-10-12 20:40:29,716 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:41:05] 2025-10-12 20:40:29,810 | INFO     | job 6840224804 has completed (purged errors)
[2025-10-12 16:41:05] 2025-10-12 20:40:29,810 | INFO     | overall cleanup function is called
[2025-10-12 16:41:05] 2025-10-12 20:40:30,817 | INFO     | --- collectZombieJob: --- 10, [3696239]
[2025-10-12 16:41:05] 2025-10-12 20:40:30,818 | INFO     | zombie collector waiting for pid 3696239
[2025-10-12 16:41:05] 2025-10-12 20:40:30,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:41:05] 2025-10-12 20:40:30,818 | INFO     | collected zombie processes
[2025-10-12 16:41:05] 2025-10-12 20:40:30,818 | INFO     | will attempt to kill all subprocesses of pid=3696239
[2025-10-12 16:41:05] 2025-10-12 20:40:32,037 | INFO     | process IDs to be killed: [3696239] (in reverse order)
[2025-10-12 16:41:05] 2025-10-12 20:40:32,225 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:41:05] 2025-10-12 20:40:32,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:41:05] 2025-10-12 20:40:32,320 | INFO     | did not find any defunct processes belonging to 3696239
[2025-10-12 16:41:05] 2025-10-12 20:40:32,359 | INFO     | did not find any defunct processes belonging to 3696239
[2025-10-12 16:41:05] 2025-10-12 20:40:32,360 | INFO     | ready for new job
[2025-10-12 16:41:05] 2025-10-12 20:40:32,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:41:05] 2025-10-12 20:40:32,365 | INFO     | ***************************************
[2025-10-12 16:41:05] 2025-10-12 20:40:32,365 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:41:05] 2025-10-12 20:40:32,365 | INFO     | ***************************************
[2025-10-12 16:41:05] 2025-10-12 20:40:32,365 | INFO     | 
[2025-10-12 16:41:05] 2025-10-12 20:40:32,374 | INFO     | architecture information:
[2025-10-12 16:41:05] 2025-10-12 20:40:32,378 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:41:05] 2025-10-12 20:40:32,490 | INFO     | cat /etc/os-release:
[2025-10-12 16:41:05] NAME="CentOS Linux"
[2025-10-12 16:41:05] VERSION="7 (Core)"
[2025-10-12 16:41:05] ID="centos"
[2025-10-12 16:41:05] ID_LIKE="rhel fedora"
[2025-10-12 16:41:05] VERSION_ID="7"
[2025-10-12 16:41:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:41:05] ANSI_COLOR="0;31"
[2025-10-12 16:41:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:41:05] HOME_URL="https://www.centos.org/"
[2025-10-12 16:41:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:41:05] 
[2025-10-12 16:41:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:41:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:41:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:41:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:41:05] 
[2025-10-12 16:41:05] 2025-10-12 20:40:32,490 | INFO     | ***************************************
[2025-10-12 16:41:05] 2025-10-12 20:40:32,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 16:41:05] 2025-10-12 20:40:33,115 | INFO     | sufficient remaining disk space (170110484480 B)
[2025-10-12 16:41:05] 2025-10-12 20:40:33,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:41:05] 2025-10-12 20:40:33,128 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:41:05] 2025-10-12 20:40:33,128 | INFO     | update_server=False
[2025-10-12 16:41:05] 2025-10-12 20:40:33,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:41:05] 2025-10-12 20:40:33,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:41:05] 2025-10-12 20:40:33,129 | INFO     | aborting loop
[2025-10-12 16:41:05] 2025-10-12 20:40:33,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:41:05] 2025-10-12 20:40:33,753 | INFO     | all job control threads have been joined
[2025-10-12 16:41:05] 2025-10-12 20:40:34,134 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,135 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,228 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,234 | INFO     | [job] validate thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,244 | INFO     | all data control threads have been joined
[2025-10-12 16:41:05] 2025-10-12 20:40:34,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:41:05] 2025-10-12 20:40:34,468 | INFO     | all payload control threads have been joined
[2025-10-12 16:41:05] 2025-10-12 20:40:34,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:41:05] 2025-10-12 20:40:34,487 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,552 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,759 | INFO     | [job] control thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,872 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:34,873 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:35,250 | INFO     | [data] control thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:35,343 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:35,474 | INFO     | [payload] control thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:35,494 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:36,383 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:37,528 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:41:05] 2025-10-12 20:40:41,283 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:41:05] 2025-10-12 20:40:41,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909991495488)>', '<ExcThread(monitor, started 139909205575424)>']
[2025-10-12 16:41:05] 2025-10-12 20:40:46,865 | INFO     | all workflow threads have been joined
[2025-10-12 16:41:05] 2025-10-12 20:40:46,867 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:41:05] 2025-10-12 20:40:46,868 | INFO     | traces error code: 0
[2025-10-12 16:41:05] 2025-10-12 20:40:46,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:41:05] 2025-10-12 20:41:03,955 | INFO     | PID=3685805 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:41:05] 2025-10-12 20:41:03,956 | INFO     | .. there are 23 such processes running
[2025-10-12 16:41:05] 2025-10-12 20:41:03,956 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:41:05] 2025-10-12 20:41:03,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:41:05] 2025-10-12 20:41:03,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:41:05] 2025-10-12 20:41:03,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:41:05] 2025-10-12 20:41:03,956 | INFO     | [monitor] control thread has ended
[2025-10-12 16:41:05] 2025-10-12 20:41:04,593 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:41:05] 2025-10-12 20:41:04,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:41:05] 2025-10-12 20:41:04,651 [wrapper] pilotpid: 3685805
[2025-10-12 16:41:05] 2025-10-12 20:41:04,675 [wrapper] Pilot exit status: 0
[2025-10-12 16:41:05] 2025-10-12 20:41:04,851 [wrapper] pandaids: 6840224804
[2025-10-12 16:41:05] 2025-10-12 20:41:05,277 [wrapper] cleanup supervisor_pilot  239150 3685806
[2025-10-12 16:41:05] 2025-10-12 20:41:05,323 [wrapper] Test setup, not cleaning
[2025-10-12 16:41:05] 2025-10-12 20:41:05,356 [wrapper] apfmon messages muted
[2025-10-12 16:41:05] 2025-10-12 20:41:05,359 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:41:05] 2025-10-12 20:41:05,392 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:41:05]  *** Error codes and diagnostics ***
[2025-10-12 16:41:05]     "exeErrorCode": 0,
[2025-10-12 16:41:05]     "exeErrorDiag": "",
[2025-10-12 16:41:05]     "pilotErrorCode": 0,
[2025-10-12 16:41:05]     "pilotErrorDiag": "",
[2025-10-12 16:41:05]  *** Listing of results directory ***
[2025-10-12 16:41:05] total 407572
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:21 queuedata.json
[2025-10-12 16:41:05] -rwx------. 1 boincer umatlas     36292 Oct 12 11:22 runpilot2-wrapper.sh
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:41:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:47 run_atlas
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:47 job.xml
[2025-10-12 16:41:05] -rw-r--r--. 2 boincer umatlas 218676675 Oct 12 12:47 EVNT.46676267._004566.pool.root.1
[2025-10-12 16:41:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:47 start_atlas.sh
[2025-10-12 16:41:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:47 shared
[2025-10-12 16:41:05] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 12:47 input.tar.gz
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:47 boinc_lockfile
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 12:47 pandaJob.out
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas    975528 Oct 12 12:48 agis_schedconf.cvmfs.json
[2025-10-12 16:41:05] drwx------. 5 boincer umatlas      4096 Oct 12 12:48 pilot3
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas 190153386 Oct 12 16:37 HITS.46676269._082099.pool.root.1
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:38 boinc_task_state.xml
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 16:39 init_data.xml
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas      1059 Oct 12 16:39 memory_monitor_summary.json
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas    453389 Oct 12 16:39 log.46676269._082099.job.log.tgz.1
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas        95 Oct 12 16:40 pilot_heartbeat.json
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas      7827 Oct 12 16:40 heartbeat.json
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:41 wrapper_checkpoint.txt
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:41 boinc_mmap_file
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas       823 Oct 12 16:41 pilotlog.txt
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas   1857730 Oct 12 16:41 log.46676269._082099.job.log.1
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas       357 Oct 12 16:41 output.list
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:41 runtime_log
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas   2334720 Oct 12 16:41 result.tar.gz
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 16:41 runtime_log.err
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas       660 Oct 12 16:41 l9DODmQ5CS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeGUMDm7mW1kn.diag
[2025-10-12 16:41:05] -rw-r--r--. 1 boincer umatlas     18383 Oct 12 16:41 stderr.txt
[2025-10-12 16:41:05] HITS file was successfully produced:
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas 190153386 Oct 12 16:37 shared/HITS.pool.root.1
[2025-10-12 16:41:05]  *** Contents of shared directory: ***
[2025-10-12 16:41:05] total 402116
[2025-10-12 16:41:05] -rw-r--r--. 2 boincer umatlas 218676675 Oct 12 12:47 ATLAS.root_0
[2025-10-12 16:41:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:47 start_atlas.sh
[2025-10-12 16:41:05] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 12:47 input.tar.gz
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas 190153386 Oct 12 16:37 HITS.pool.root.1
[2025-10-12 16:41:05] -rw-------. 1 boincer umatlas   2334720 Oct 12 16:41 result.tar.gz
16:41:07 (3678839): run_atlas exited; CPU time 25215.125521
16:41:07 (3678839): called boinc_finish(0)

</stderr_txt>
]]>

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