Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:26:22 (3078368): wrapper (7.7.26015): starting
14:26:22 (3078368): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:26:22] Arguments: --nthreads 8
[2025-10-12 14:26:22] Threads: 8
[2025-10-12 14:26:22] Checking for CVMFS
[2025-10-12 14:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:26:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:26:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:26:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:26:45] 2.13.2.0 5391 4564 84896 151631 1 65 14571287 40960000 11589 16776704 0 7199482 99.851 3121022 31890 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:26:45] CVMFS is ok
[2025-10-12 14:26:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:26:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:26:45] Further information can be found at the LHC@home message board.
[2025-10-12 14:26:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:26:45] Checking for apptainer binary...
[2025-10-12 14:26:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:26:45] Running /usr/bin/apptainer --version
[2025-10-12 14:26:45] apptainer version 1.4.3-1.el9
[2025-10-12 14:26:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:26:46] c-210-35-4.aglt2.org
[2025-10-12 14:26:46] apptainer works
[2025-10-12 14:26:46] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:26:46] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:26:46] Starting ATLAS job with PandaID=6839991176
[2025-10-12 14:26:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:58:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:58:26] 2025-10-12 20:57:54,678 | INFO     | monitor loop #635: job 0:6839991176 is in state 'finished'
[2025-10-12 16:58:26] 2025-10-12 20:57:54,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,686 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2790.2888214285713
[2025-10-12 16:58:26] 2025-10-12 20:57:54,756 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839991176/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,756 | INFO     | extracted standard info from prmon json
[2025-10-12 16:58:26] 2025-10-12 20:57:54,756 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:58:26] 2025-10-12 20:57:54,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:58:26] 2025-10-12 20:57:54,757 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:58:26] 2025-10-12 20:57:54,757 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:58:26] 2025-10-12 20:57:54,766 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:58:26] 2025-10-12 20:57:54,766 | INFO     | sum of square deviations: 945224298.5103433
[2025-10-12 16:58:26] 2025-10-12 20:57:54,767 | INFO     | sum of deviations: 20048072259.910347
[2025-10-12 16:58:26] 2025-10-12 20:57:54,787 | INFO     | mean x: 1760298219.1310344
[2025-10-12 16:58:26] 2025-10-12 20:57:54,787 | INFO     | mean y: 2489162.5310344826
[2025-10-12 16:58:26] 2025-10-12 20:57:54,787 | INFO     | -- intersect: -37333184446.10113
[2025-10-12 16:58:26] 2025-10-12 20:57:54,787 | INFO     | intersect: -37333184446.10113
[2025-10-12 16:58:26] 2025-10-12 20:57:54,787 | INFO     | chi2: 2.049166817705046
[2025-10-12 16:58:26] 2025-10-12 20:57:54,788 | INFO     | sum of square deviations: 850772508.4214274
[2025-10-12 16:58:26] 2025-10-12 20:57:54,788 | INFO     | sum of deviations: 19388917795.807148
[2025-10-12 16:58:26] 2025-10-12 20:57:54,788 | INFO     | mean x: 1760298066.6357143
[2025-10-12 16:58:26] 2025-10-12 20:57:54,788 | INFO     | mean y: 2488097.8785714284
[2025-10-12 16:58:26] 2025-10-12 20:57:54,789 | INFO     | -- intersect: -40114316538.23433
[2025-10-12 16:58:26] 2025-10-12 20:57:54,789 | INFO     | intersect: -40114316538.23433
[2025-10-12 16:58:26] 2025-10-12 20:57:54,789 | INFO     | chi2: 2.052583811227242
[2025-10-12 16:58:26] 2025-10-12 20:57:54,789 | INFO     | current chi2=2.052583811227242 (change=-0.16675038326176875 %)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,789 | INFO     | right removable region: 139
[2025-10-12 16:58:26] 2025-10-12 20:57:54,789 | INFO     | sum of square deviations: 850769640.6857142
[2025-10-12 16:58:26] 2025-10-12 20:57:54,790 | INFO     | sum of deviations: -7631797105.142854
[2025-10-12 16:58:26] 2025-10-12 20:57:54,790 | INFO     | mean x: 1760298371.6285715
[2025-10-12 16:58:26] 2025-10-12 20:57:54,790 | INFO     | mean y: 2533315.785714286
[2025-10-12 16:58:26] 2025-10-12 20:57:54,790 | INFO     | -- intersect: 15793223738.112856
[2025-10-12 16:58:26] 2025-10-12 20:57:54,790 | INFO     | intersect: 15793223738.112856
[2025-10-12 16:58:26] 2025-10-12 20:57:54,790 | INFO     | chi2: 0.14159640159805428
[2025-10-12 16:58:26] 2025-10-12 20:57:54,791 | INFO     | current chi2=0.14159640159805428 (change=93.09005004499173 %)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,791 | INFO     | sum of square deviations: 762818315.5999992
[2025-10-12 16:58:26] 2025-10-12 20:57:54,791 | INFO     | sum of deviations: -8857431757.199999
[2025-10-12 16:58:26] 2025-10-12 20:57:54,791 | INFO     | mean x: 1760298524.1333334
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | mean y: 2535370.6222222224
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | -- intersect: 20442165268.007572
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | intersect: 20442165268.007572
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | chi2: 0.12438475141650314
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | current chi2=0.12438475141650314 (change=12.155429083861446 %)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | left removable region: 20
[2025-10-12 16:58:26] 2025-10-12 20:57:54,792 | INFO     | sum of square deviations: 522492093.98319346
[2025-10-12 16:58:26] 2025-10-12 20:57:54,793 | INFO     | sum of deviations: 1437356746.4033613
[2025-10-12 16:58:26] 2025-10-12 20:57:54,793 | INFO     | mean x: 1760298646.092437
[2025-10-12 16:58:26] 2025-10-12 20:57:54,793 | INFO     | mean y: 2515374.781512605
[2025-10-12 16:58:26] 2025-10-12 20:57:54,793 | INFO     | -- intersect: -4840002174.827675
[2025-10-12 16:58:26] 2025-10-12 20:57:54,793 | INFO     | intersect: -4840002174.827675
[2025-10-12 16:58:26] 2025-10-12 20:57:54,793 | INFO     | chi2: 0.0009166451304090364
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | -- intersect: -4840002174.827675
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | current memory leak: 2.75 B/s (using 119 data points, chi2=0.00)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | could have reported an average CPU frequency of 2610 MHz (8 samples)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | ..............................
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | . Timing measurements:
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | . get job = 0 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,794 | INFO     | . initial setup = 3 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,795 | INFO     | . payload setup = 39 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,795 | INFO     | . stage-in = 0 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,795 | INFO     | . payload execution = 8865 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,795 | INFO     | . stage-out = 1 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,795 | INFO     | . log creation = 0 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,795 | INFO     | ..............................
[2025-10-12 16:58:26] 2025-10-12 20:57:54,944 | INFO     | 
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | job summary report
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | --------------------------------------------------
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | PanDA job id: 6839991176
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | task id: 46676269
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | errors: (none)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | pilot state: finished 
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | transexitcode: 0
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | exeerrorcode: 0
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | exeerrordiag: 
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | exitcode: 0
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | exitmsg: OK
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | cpuconsumptiontime: 41415 s
[2025-10-12 16:58:26] 2025-10-12 20:57:54,945 | INFO     | nevents: 400
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | neventsw: 0
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | pid: 3091495
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | pgrp: 3091495
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | corecount: 8
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | event service: False
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 3: 2348913, 13: 2348941, 24: 2348997, 35: 2349153, 36: 2349443, 46: 2349471, 8909: 2377703, 8912: 2386701, 8914: 238703
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | --------------------------------------------------
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | 
[2025-10-12 16:58:26] 2025-10-12 20:57:54,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:58:26] 2025-10-12 20:57:54,981 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,982 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | job 6839991176 has completed (purged errors)
[2025-10-12 16:58:26] 2025-10-12 20:57:54,983 | INFO     | overall cleanup function is called
[2025-10-12 16:58:26] 2025-10-12 20:57:55,992 | INFO     | --- collectZombieJob: --- 10, [3091495]
[2025-10-12 16:58:26] 2025-10-12 20:57:55,993 | INFO     | zombie collector waiting for pid 3091495
[2025-10-12 16:58:26] 2025-10-12 20:57:55,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:58:26] 2025-10-12 20:57:55,993 | INFO     | collected zombie processes
[2025-10-12 16:58:26] 2025-10-12 20:57:55,993 | INFO     | will attempt to kill all subprocesses of pid=3091495
[2025-10-12 16:58:26] 2025-10-12 20:57:56,341 | INFO     | process IDs to be killed: [3091495] (in reverse order)
[2025-10-12 16:58:26] 2025-10-12 20:57:56,455 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:58:26] 2025-10-12 20:57:56,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:58:26] 2025-10-12 20:57:56,470 | INFO     | did not find any defunct processes belonging to 3091495
[2025-10-12 16:58:26] 2025-10-12 20:57:56,484 | INFO     | did not find any defunct processes belonging to 3091495
[2025-10-12 16:58:26] 2025-10-12 20:57:56,484 | INFO     | ready for new job
[2025-10-12 16:58:26] 2025-10-12 20:57:56,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:58:26] 2025-10-12 20:57:56,488 | INFO     | ***************************************
[2025-10-12 16:58:26] 2025-10-12 20:57:56,488 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:58:26] 2025-10-12 20:57:56,488 | INFO     | ***************************************
[2025-10-12 16:58:26] 2025-10-12 20:57:56,488 | INFO     | 
[2025-10-12 16:58:26] 2025-10-12 20:57:56,496 | INFO     | architecture information:
[2025-10-12 16:58:26] 2025-10-12 20:57:56,497 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:58:26] 2025-10-12 20:57:56,519 | INFO     | cat /etc/os-release:
[2025-10-12 16:58:26] NAME="CentOS Linux"
[2025-10-12 16:58:26] VERSION="7 (Core)"
[2025-10-12 16:58:26] ID="centos"
[2025-10-12 16:58:26] ID_LIKE="rhel fedora"
[2025-10-12 16:58:26] VERSION_ID="7"
[2025-10-12 16:58:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:58:26] ANSI_COLOR="0;31"
[2025-10-12 16:58:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:58:26] HOME_URL="https://www.centos.org/"
[2025-10-12 16:58:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:58:26] 
[2025-10-12 16:58:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:58:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:58:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:58:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:58:26] 
[2025-10-12 16:58:26] 2025-10-12 20:57:56,520 | INFO     | ***************************************
[2025-10-12 16:58:26] 2025-10-12 20:57:57,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:58:26] 2025-10-12 20:57:57,053 | INFO     | sufficient remaining disk space (74457284608 B)
[2025-10-12 16:58:26] 2025-10-12 20:57:57,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:58:26] 2025-10-12 20:57:57,054 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:58:26] 2025-10-12 20:57:57,054 | INFO     | update_server=False
[2025-10-12 16:58:26] 2025-10-12 20:57:57,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:58:26] 2025-10-12 20:57:57,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:58:26] 2025-10-12 20:57:57,112 | INFO     | all data control threads have been joined
[2025-10-12 16:58:26] 2025-10-12 20:57:57,182 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:58:26] 2025-10-12 20:57:57,183 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:58:26] 2025-10-12 20:57:57,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:58:26] 2025-10-12 20:57:57,183 | INFO     | will abort loop
[2025-10-12 16:58:26] 2025-10-12 20:57:57,254 | INFO     | all job control threads have been joined
[2025-10-12 16:58:26] 2025-10-12 20:57:57,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:58:26] 2025-10-12 20:57:58,059 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,097 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,118 | INFO     | [data] control thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,189 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,253 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,260 | INFO     | [job] control thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,332 | INFO     | all payload control threads have been joined
[2025-10-12 16:58:26] 2025-10-12 20:57:58,514 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,720 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,751 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,956 | INFO     | [job] validate thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:58,970 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:59,015 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:59,338 | INFO     | [payload] control thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:59,389 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:57:59,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:58:26] 2025-10-12 20:58:00,974 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:58:01,079 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:58:26] 2025-10-12 20:58:09,837 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:58:26] 2025-10-12 20:58:11,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766399530816)>', '<ExcThread(monitor, started 139765676500736)>']
[2025-10-12 16:58:26] 2025-10-12 20:58:16,535 | INFO     | all workflow threads have been joined
[2025-10-12 16:58:26] 2025-10-12 20:58:16,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:58:26] 2025-10-12 20:58:16,536 | INFO     | traces error code: 0
[2025-10-12 16:58:26] 2025-10-12 20:58:16,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:58:26] 2025-10-12 20:58:26,485 | INFO     | PID=3082361 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:58:26] 2025-10-12 20:58:26,486 | INFO     | .. there are 10 such processes running
[2025-10-12 16:58:26] 2025-10-12 20:58:26,486 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:58:26] 2025-10-12 20:58:26,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:58:26] 2025-10-12 20:58:26,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:58:26] 2025-10-12 20:58:26,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:58:26] 2025-10-12 20:58:26,487 | INFO     | [monitor] control thread has ended
[2025-10-12 16:58:26] 2025-10-12 20:58:26,699 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:58:26] 2025-10-12 20:58:26,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:58:26] 2025-10-12 20:58:26,707 [wrapper] pilotpid: 3082361
[2025-10-12 16:58:26] 2025-10-12 20:58:26,710 [wrapper] Pilot exit status: 0
[2025-10-12 16:58:26] 2025-10-12 20:58:26,729 [wrapper] pandaids: 6839991176
[2025-10-12 16:58:26] 2025-10-12 20:58:26,775 [wrapper] cleanup supervisor_pilot 3370970 3082362
[2025-10-12 16:58:26] 2025-10-12 20:58:26,779 [wrapper] Test setup, not cleaning
[2025-10-12 16:58:26] 2025-10-12 20:58:26,782 [wrapper] apfmon messages muted
[2025-10-12 16:58:26] 2025-10-12 20:58:26,785 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:58:26] 2025-10-12 20:58:26,787 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:58:26]  *** Error codes and diagnostics ***
[2025-10-12 16:58:26]     "exeErrorCode": 0,
[2025-10-12 16:58:26]     "exeErrorDiag": "",
[2025-10-12 16:58:26]     "pilotErrorCode": 0,
[2025-10-12 16:58:26]     "pilotErrorDiag": "",
[2025-10-12 16:58:26]  *** Listing of results directory ***
[2025-10-12 16:58:26] total 402952
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:17 queuedata.json
[2025-10-12 16:58:26] -rwx------. 1 boincer umatlas     36292 Oct 12 09:17 runpilot2-wrapper.sh
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:58:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:26 run_atlas
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:26 job.xml
[2025-10-12 16:58:26] -rw-r--r--. 2 boincer umatlas 219978648 Oct 12 14:26 EVNT.46676267._003861.pool.root.1
[2025-10-12 16:58:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:26 start_atlas.sh
[2025-10-12 16:58:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:26 shared
[2025-10-12 16:58:26] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 14:26 input.tar.gz
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:26 boinc_lockfile
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:26 pandaJob.out
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas    975528 Oct 12 14:27 agis_schedconf.cvmfs.json
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:58:26] drwx------. 5 boincer umatlas      4096 Oct 12 14:27 pilot3
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas 185465444 Oct 12 16:57 HITS.46676269._079305.pool.root.1
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:57 boinc_task_state.xml
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas      1057 Oct 12 16:57 memory_monitor_summary.json
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 16:57 init_data.xml
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas    402555 Oct 12 16:57 log.46676269._079305.job.log.tgz.1
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas      7830 Oct 12 16:57 heartbeat.json
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas        27 Oct 12 16:58 wrapper_checkpoint.txt
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:58 boinc_mmap_file
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas        95 Oct 12 16:58 pilot_heartbeat.json
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas       823 Oct 12 16:58 pilotlog.txt
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas   1237774 Oct 12 16:58 log.46676269._079305.job.log.1
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas       357 Oct 12 16:58 output.list
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:58 runtime_log
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas   1658880 Oct 12 16:58 result.tar.gz
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas      8713 Oct 12 16:58 runtime_log.err
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas       654 Oct 12 16:58 8P3NDmN8AS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyyjNDmLDfw8m.diag
[2025-10-12 16:58:26] -rw-r--r--. 1 boincer umatlas     21268 Oct 12 16:58 stderr.txt
[2025-10-12 16:58:26] HITS file was successfully produced:
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas 185465444 Oct 12 16:57 shared/HITS.pool.root.1
[2025-10-12 16:58:26]  *** Contents of shared directory: ***
[2025-10-12 16:58:26] total 398144
[2025-10-12 16:58:26] -rw-r--r--. 2 boincer umatlas 219978648 Oct 12 14:26 ATLAS.root_0
[2025-10-12 16:58:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:26 start_atlas.sh
[2025-10-12 16:58:26] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 14:26 input.tar.gz
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas 185465444 Oct 12 16:57 HITS.pool.root.1
[2025-10-12 16:58:26] -rw-------. 1 boincer umatlas   1658880 Oct 12 16:58 result.tar.gz
16:58:28 (3078368): run_atlas exited; CPU time 41603.220971
16:58:28 (3078368): called boinc_finish(0)

</stderr_txt>
]]>

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