Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:44:08 (29167): wrapper (7.7.26015): starting
12:44:08 (29167): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:44:08] Arguments: --nthreads 8
[2025-10-12 12:44:08] Threads: 8
[2025-10-12 12:44:08] Checking for CVMFS
[2025-10-12 12:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:44:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:44:08] 2.11.2.0 2843 3091 70664 151627 3 56 12355818 20275201 1 130560 0 2168419 99.990 106361 35172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:44:08] CVMFS is ok
[2025-10-12 12:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:44:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:44:08] Further information can be found at the LHC@home message board.
[2025-10-12 12:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:44:08] Checking for apptainer binary...
[2025-10-12 12:44:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:44:08] Running /usr/bin/apptainer --version
[2025-10-12 12:44:08] apptainer version 1.3.2-1.el7
[2025-10-12 12:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:44:10] c-204-34.aglt2.org
[2025-10-12 12:44:10] apptainer works
[2025-10-12 12:44:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:44:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:44:10] Starting ATLAS job with PandaID=6839590609
[2025-10-12 12:44:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:46:19 (26534): wrapper (7.7.26015): starting
13:46:19 (26534): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:46:19] Arguments: --nthreads 8
[2025-10-12 13:46:19] Threads: 8
[2025-10-12 13:46:19] This job has been restarted, cleaning up previous attempt
[2025-10-12 13:46:19] Checking for CVMFS
[2025-10-12 13:46:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:46:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:46:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:46:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:46:20] 2.11.2.0 2843 3153 77500 151629 1 11 12410287 20275201 1 130560 0 2234856 99.990 107674 35222 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:46:20] CVMFS is ok
[2025-10-12 13:46:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:46:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:46:20] Further information can be found at the LHC@home message board.
[2025-10-12 13:46:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:46:20] Checking for apptainer binary...
[2025-10-12 13:46:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:46:20] Running /usr/bin/apptainer --version
[2025-10-12 13:46:20] apptainer version 1.3.2-1.el7
[2025-10-12 13:46:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:46:22] c-204-34.aglt2.org
[2025-10-12 13:46:22] apptainer works
[2025-10-12 13:46:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:46:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:46:22] Starting ATLAS job with PandaID=6839590609
[2025-10-12 13:46:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:46:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:46:02] 2025-10-12 19:45:30,597 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:46:02] 2025-10-12 19:45:30,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:46:02] 2025-10-12 19:45:30,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:46:02] 2025-10-12 19:45:30,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:46:02] 2025-10-12 19:45:30,601 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:46:02] 2025-10-12 19:45:30,601 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,602 | INFO     | sum of deviations: 11569451845.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,602 | INFO     | mean x: 1760294768.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,602 | INFO     | mean y: 2451516.1025641025
[2025-10-12 15:46:02] 2025-10-12 19:45:30,602 | INFO     | -- intersect: -41007938420.035675
[2025-10-12 15:46:02] 2025-10-12 19:45:30,603 | INFO     | intersect: -41007938420.035675
[2025-10-12 15:46:02] 2025-10-12 19:45:30,603 | INFO     | chi2: 2.191678647467226
[2025-10-12 15:46:02] 2025-10-12 19:45:30,603 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | sum of deviations: 18549156726.5
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | mean x: 1760294615.5
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | mean y: 2468298.098214286
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | -- intersect: -74954439506.88821
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | intersect: -74954439506.88821
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | chi2: 1.417714473824122
[2025-10-12 15:46:02] 2025-10-12 19:45:30,604 | INFO     | current chi2=1.417714473824122 (change=35.313761647380275 %)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,605 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,605 | INFO     | sum of deviations: 17629342088.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,605 | INFO     | mean x: 1760294463.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,605 | INFO     | mean y: 2465781.644859813
[2025-10-12 15:46:02] 2025-10-12 19:45:30,606 | INFO     | -- intersect: -81698954369.63586
[2025-10-12 15:46:02] 2025-10-12 19:45:30,606 | INFO     | intersect: -81698954369.63586
[2025-10-12 15:46:02] 2025-10-12 19:45:30,606 | INFO     | chi2: 1.4191714513277895
[2025-10-12 15:46:02] 2025-10-12 19:45:30,606 | INFO     | current chi2=1.4191714513277895 (change=-0.10276945961745297 %)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,606 | INFO     | right removable region: 106
[2025-10-12 15:46:02] 2025-10-12 19:45:30,606 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,607 | INFO     | sum of deviations: -4795663778.999999
[2025-10-12 15:46:02] 2025-10-12 19:45:30,607 | INFO     | mean x: 1760294920.5
[2025-10-12 15:46:02] 2025-10-12 19:45:30,607 | INFO     | mean y: 2491558.160714286
[2025-10-12 15:46:02] 2025-10-12 19:45:30,607 | INFO     | -- intersect: 19381711612.753975
[2025-10-12 15:46:02] 2025-10-12 19:45:30,608 | INFO     | intersect: 19381711612.753975
[2025-10-12 15:46:02] 2025-10-12 19:45:30,608 | INFO     | chi2: 0.8289132566773414
[2025-10-12 15:46:02] 2025-10-12 19:45:30,608 | INFO     | current chi2=0.8289132566773414 (change=62.17906956226178 %)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,608 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,609 | INFO     | sum of deviations: -6210137696.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,609 | INFO     | mean x: 1760295073.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,609 | INFO     | mean y: 2495298.046728972
[2025-10-12 15:46:02] 2025-10-12 19:45:30,609 | INFO     | -- intersect: 28782766415.84577
[2025-10-12 15:46:02] 2025-10-12 19:45:30,609 | INFO     | intersect: 28782766415.84577
[2025-10-12 15:46:02] 2025-10-12 19:45:30,609 | INFO     | chi2: 0.8076038180695737
[2025-10-12 15:46:02] 2025-10-12 19:45:30,610 | INFO     | current chi2=0.8076038180695737 (change=2.570768224070337 %)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,610 | INFO     | left removable region: 20
[2025-10-12 15:46:02] 2025-10-12 19:45:30,610 | INFO     | sum of square deviations: 197203697.5
[2025-10-12 15:46:02] 2025-10-12 19:45:30,610 | INFO     | sum of deviations: 991553780.0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,610 | INFO     | mean x: 1760295042.5
[2025-10-12 15:46:02] 2025-10-12 19:45:30,611 | INFO     | mean y: 2514774.7674418604
[2025-10-12 15:46:02] 2025-10-12 19:45:30,611 | INFO     | -- intersect: -8848369997.847612
[2025-10-12 15:46:02] 2025-10-12 19:45:30,611 | INFO     | intersect: -8848369997.847612
[2025-10-12 15:46:02] 2025-10-12 19:45:30,611 | INFO     | chi2: 0.00010381375947995064
[2025-10-12 15:46:02] 2025-10-12 19:45:30,611 | INFO     | -- intersect: -8848369997.847612
[2025-10-12 15:46:02] 2025-10-12 19:45:30,611 | INFO     | current memory leak: 5.03 B/s (using 86 data points, chi2=0.00)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | could have reported an average CPU frequency of 1948 MHz (7 samples)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | ..............................
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | . Timing measurements:
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | . get job = 0 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | . initial setup = 1 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | . payload setup = 8 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,612 | INFO     | . stage-in = 0 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,613 | INFO     | . payload execution = 7089 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,613 | INFO     | . stage-out = 2 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,613 | INFO     | . log creation = 0 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,613 | INFO     | ..............................
[2025-10-12 15:46:02] 2025-10-12 19:45:30,704 | INFO     | 
[2025-10-12 15:46:02] 2025-10-12 19:45:30,704 | INFO     | job summary report
[2025-10-12 15:46:02] 2025-10-12 19:45:30,704 | INFO     | --------------------------------------------------
[2025-10-12 15:46:02] 2025-10-12 19:45:30,704 | INFO     | PanDA job id: 6839590609
[2025-10-12 15:46:02] 2025-10-12 19:45:30,704 | INFO     | task id: 46676269
[2025-10-12 15:46:02] 2025-10-12 19:45:30,704 | INFO     | errors: (none)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | pilot state: finished 
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | transexitcode: 0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | exeerrorcode: 0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | exeerrordiag: 
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | exitcode: 0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | exitmsg: OK
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | cpuconsumptiontime: 52774 s
[2025-10-12 15:46:02] 2025-10-12 19:45:30,705 | INFO     | nevents: 400
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | neventsw: 0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | pid: 5357
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | pgrp: 5357
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | corecount: 8
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | event service: False
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7102: 2376428, 7104: 2385426, 7107: 2385610, 7115: 2385804}
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | --------------------------------------------------
[2025-10-12 15:46:02] 2025-10-12 19:45:30,706 | INFO     | 
[2025-10-12 15:46:02] 2025-10-12 19:45:30,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:46:02] 2025-10-12 19:45:30,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:46:02] 2025-10-12 19:45:30,741 | INFO     | job 6839590609 has completed (purged errors)
[2025-10-12 15:46:02] 2025-10-12 19:45:30,741 | INFO     | overall cleanup function is called
[2025-10-12 15:46:02] 2025-10-12 19:45:31,749 | INFO     | --- collectZombieJob: --- 10, [5357]
[2025-10-12 15:46:02] 2025-10-12 19:45:31,749 | INFO     | zombie collector waiting for pid 5357
[2025-10-12 15:46:02] 2025-10-12 19:45:31,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:46:02] 2025-10-12 19:45:31,750 | INFO     | collected zombie processes
[2025-10-12 15:46:02] 2025-10-12 19:45:31,750 | INFO     | will attempt to kill all subprocesses of pid=5357
[2025-10-12 15:46:02] 2025-10-12 19:45:31,839 | INFO     | process IDs to be killed: [5357] (in reverse order)
[2025-10-12 15:46:02] 2025-10-12 19:45:31,898 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:46:02] 2025-10-12 19:45:31,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:46:02] 2025-10-12 19:45:31,903 | INFO     | did not find any defunct processes belonging to 5357
[2025-10-12 15:46:02] 2025-10-12 19:45:31,905 | INFO     | did not find any defunct processes belonging to 5357
[2025-10-12 15:46:02] 2025-10-12 19:45:31,906 | INFO     | ready for new job
[2025-10-12 15:46:02] 2025-10-12 19:45:31,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:46:02] 2025-10-12 19:45:31,907 | INFO     | ***************************************
[2025-10-12 15:46:02] 2025-10-12 19:45:31,907 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:46:02] 2025-10-12 19:45:31,907 | INFO     | ***************************************
[2025-10-12 15:46:02] 2025-10-12 19:45:31,908 | INFO     | 
[2025-10-12 15:46:02] 2025-10-12 19:45:31,908 | INFO     | architecture information:
[2025-10-12 15:46:02] 2025-10-12 19:45:31,909 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:46:02] 2025-10-12 19:45:31,930 | INFO     | cat /etc/os-release:
[2025-10-12 15:46:02] NAME="CentOS Linux"
[2025-10-12 15:46:02] VERSION="7 (Core)"
[2025-10-12 15:46:02] ID="centos"
[2025-10-12 15:46:02] ID_LIKE="rhel fedora"
[2025-10-12 15:46:02] VERSION_ID="7"
[2025-10-12 15:46:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:46:02] ANSI_COLOR="0;31"
[2025-10-12 15:46:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:46:02] HOME_URL="https://www.centos.org/"
[2025-10-12 15:46:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:46:02] 
[2025-10-12 15:46:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:46:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:46:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:46:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:46:02] 
[2025-10-12 15:46:02] 2025-10-12 19:45:31,930 | INFO     | ***************************************
[2025-10-12 15:46:02] 2025-10-12 19:45:32,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:46:02] 2025-10-12 19:45:32,454 | INFO     | sufficient remaining disk space (18557698048 B)
[2025-10-12 15:46:02] 2025-10-12 19:45:32,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:46:02] 2025-10-12 19:45:32,455 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:46:02] 2025-10-12 19:45:32,455 | INFO     | update_server=False
[2025-10-12 15:46:02] 2025-10-12 19:45:32,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:46:02] 2025-10-12 19:45:32,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:46:02] 2025-10-12 19:45:32,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:46:02] 2025-10-12 19:45:32,456 | INFO     | aborting loop
[2025-10-12 15:46:02] 2025-10-12 19:45:33,068 | INFO     | all data control threads have been joined
[2025-10-12 15:46:02] 2025-10-12 19:45:33,097 | INFO     | all job control threads have been joined
[2025-10-12 15:46:02] 2025-10-12 19:45:33,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:46:02] 2025-10-12 19:45:33,461 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,462 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,462 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,552 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:46:02] 2025-10-12 19:45:33,688 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,709 | INFO     | all payload control threads have been joined
[2025-10-12 15:46:02] 2025-10-12 19:45:33,734 | INFO     | [job] validate thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,893 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,897 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:33,905 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:34,073 | INFO     | [data] control thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:34,101 | INFO     | [job] control thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:34,691 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:34,714 | INFO     | [payload] control thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:34,867 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:35,156 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:37,682 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:46:02] 2025-10-12 19:45:49,965 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:46:02] 2025-10-12 19:45:51,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544483837760)>', '<ExcThread(monitor, started 140543518557952)>']
[2025-10-12 15:46:02] 2025-10-12 19:45:56,717 | INFO     | all workflow threads have been joined
[2025-10-12 15:46:02] 2025-10-12 19:45:56,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:46:02] 2025-10-12 19:45:56,718 | INFO     | traces error code: 0
[2025-10-12 15:46:02] 2025-10-12 19:45:56,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:46:02] 2025-10-12 19:46:02,038 | INFO     | PID=30331 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:46:02] 2025-10-12 19:46:02,038 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:46:02] 2025-10-12 19:46:02,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:46:02] 2025-10-12 19:46:02,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:46:02] 2025-10-12 19:46:02,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:46:02] 2025-10-12 19:46:02,039 | INFO     | [monitor] control thread has ended
[2025-10-12 15:46:02] 2025-10-12 19:46:02,146 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:46:02] 2025-10-12 19:46:02,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:46:02] 2025-10-12 19:46:02,155 [wrapper] pilotpid: 30331
[2025-10-12 15:46:02] 2025-10-12 19:46:02,160 [wrapper] Pilot exit status: 0
[2025-10-12 15:46:02] 2025-10-12 19:46:02,179 [wrapper] pandaids: 6839590609 6839590609
[2025-10-12 15:46:02] 2025-10-12 19:46:02,225 [wrapper] cleanup supervisor_pilot 19135 30332
[2025-10-12 15:46:02] 2025-10-12 19:46:02,230 [wrapper] Test setup, not cleaning
[2025-10-12 15:46:02] 2025-10-12 19:46:02,234 [wrapper] apfmon messages muted
[2025-10-12 15:46:02] 2025-10-12 19:46:02,239 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:46:02] 2025-10-12 19:46:02,244 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:46:02]  *** Error codes and diagnostics ***
[2025-10-12 15:46:02]     "exeErrorCode": 0,
[2025-10-12 15:46:02]     "exeErrorDiag": "",
[2025-10-12 15:46:02]     "pilotErrorCode": 0,
[2025-10-12 15:46:02]     "pilotErrorDiag": "",
[2025-10-12 15:46:02]  *** Listing of results directory ***
[2025-10-12 15:46:02] total 626712
[2025-10-12 15:46:02] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:10 queuedata.json
[2025-10-12 15:46:02] -rwx------ 1 boincer umatlas     36292 Oct 12 02:11 runpilot2-wrapper.sh
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:46:02] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:44 run_atlas
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:44 job.xml
[2025-10-12 15:46:02] -rw-r--r-- 3 boincer umatlas 221984788 Oct 12 12:44 EVNT.46676267._004330.pool.root.1
[2025-10-12 15:46:02] -rw-r--r-- 3 boincer umatlas 221984788 Oct 12 12:44 ATLAS.root_0
[2025-10-12 15:46:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:44 start_atlas.sh
[2025-10-12 15:46:02] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:44 shared
[2025-10-12 15:46:02] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 12:44 input.tar.gz
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:44 boinc_lockfile
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:46 pandaJob.out
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas    975528 Oct 12 13:46 agis_schedconf.cvmfs.json
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 15:37 init_data.xml
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas 191154880 Oct 12 15:44 HITS.46676269._072178.pool.root.1
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas      1062 Oct 12 15:45 memory_monitor_summary.json
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:45 boinc_task_state.xml
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas   1560580 Oct 12 15:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas    359810 Oct 12 15:45 log.46676269._072178.job.log.tgz.1
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas        96 Oct 12 15:45 pilot_heartbeat.json
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas      7842 Oct 12 15:45 heartbeat.json
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:45 wrapper_checkpoint.txt
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:45 boinc_mmap_file
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas       745 Oct 12 15:46 pilotlog.txt
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas   1003753 Oct 12 15:46 log.46676269._072178.job.log.1
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas       357 Oct 12 15:46 output.list
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:46 runtime_log
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas   1382400 Oct 12 15:46 result.tar.gz
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas      8788 Oct 12 15:46 runtime_log.err
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas       785 Oct 12 15:46 BO8NDm1T4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpmiNDmtfdNPo.diag
[2025-10-12 15:46:02] -rw-r--r-- 1 boincer umatlas     22992 Oct 12 15:46 stderr.txt
[2025-10-12 15:46:02] HITS file was successfully produced:
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas 191154880 Oct 12 15:44 shared/HITS.pool.root.1
[2025-10-12 15:46:02]  *** Contents of shared directory: ***
[2025-10-12 15:46:02] total 405392
[2025-10-12 15:46:02] -rw-r--r-- 3 boincer umatlas 221984788 Oct 12 12:44 ATLAS.root_0
[2025-10-12 15:46:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:44 start_atlas.sh
[2025-10-12 15:46:02] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 12:44 input.tar.gz
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas 191154880 Oct 12 15:44 HITS.pool.root.1
[2025-10-12 15:46:02] -rw------- 1 boincer umatlas   1382400 Oct 12 15:46 result.tar.gz
15:46:04 (26534): run_atlas exited; CPU time 52788.766218
15:46:04 (26534): called boinc_finish(0)

</stderr_txt>
]]>

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