Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:36 (662424): wrapper (7.7.26015): starting
13:22:36 (662424): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:22:36] Arguments: --nthreads 8
[2025-10-12 13:22:36] Threads: 8
[2025-10-12 13:22:36] Checking for CVMFS
[2025-10-12 13:22:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:22:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:22:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:22:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:22:38] 2.13.2.0 100689 138408 589332 151629 3 197 18224244 32935936 61272 16776704 0 616410611 99.670 547276775 19034 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:22:38] CVMFS is ok
[2025-10-12 13:22:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:22:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:22:38] Further information can be found at the LHC@home message board.
[2025-10-12 13:22:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:22:38] Checking for apptainer binary...
[2025-10-12 13:22:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:22:38] Running /usr/bin/apptainer --version
[2025-10-12 13:22:38] apptainer version 1.4.3-1.el9
[2025-10-12 13:22:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:22:38] c7-2-38.aglt2.org
[2025-10-12 13:22:38] apptainer works
[2025-10-12 13:22:38] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:22:38] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:22:38] Starting ATLAS job with PandaID=6840223806
[2025-10-12 13:22:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:11:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:11:32] 2025-10-12 19:10:45,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:11:32] 2025-10-12 19:10:46,297 | INFO     | time since job start (6452s) is within the limit (172800.0s)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,050 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:11:32] 2025-10-12 19:10:47,061 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3537.1914270833336
[2025-10-12 15:11:32] 2025-10-12 19:10:47,075 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6840223806/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,076 | INFO     | extracted standard info from prmon json
[2025-10-12 15:11:32] 2025-10-12 19:10:47,076 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:11:32] 2025-10-12 19:10:47,076 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:11:32] 2025-10-12 19:10:47,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:11:32] 2025-10-12 19:10:47,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:11:32] 2025-10-12 19:10:47,083 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:11:32] 2025-10-12 19:10:47,083 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,084 | INFO     | sum of deviations: -4576821337.999999
[2025-10-12 15:11:32] 2025-10-12 19:10:47,084 | INFO     | mean x: 1760293029.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,084 | INFO     | mean y: 2274190.6095238095
[2025-10-12 15:11:32] 2025-10-12 19:10:47,084 | INFO     | -- intersect: 22448431436.500942
[2025-10-12 15:11:32] 2025-10-12 19:10:47,084 | INFO     | intersect: 22448431436.500942
[2025-10-12 15:11:32] 2025-10-12 19:10:47,085 | INFO     | chi2: 2.6927299416507906
[2025-10-12 15:11:32] 2025-10-12 19:10:47,085 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,085 | INFO     | sum of deviations: 1290199318.5
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | mean x: 1760292876.5
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | mean y: 2291783.21
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | -- intersect: -7322693345.092794
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | intersect: -7322693345.092794
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | chi2: 2.0499060364605928
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | current chi2=2.0499060364605928 (change=23.87257241237165 %)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | right removable region: 99
[2025-10-12 15:11:32] 2025-10-12 19:10:47,090 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | sum of deviations: -20993471958.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | mean x: 1760293181.5
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | mean y: 2324417.5
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | -- intersect: 119190805083.3968
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | intersect: 119190805083.3968
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | chi2: 0.9271785575650109
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | current chi2=0.9271785575650109 (change=65.56733955293713 %)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,091 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | sum of deviations: -17096910420.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | mean x: 1760293334.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | mean y: 2310954.168421053
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | -- intersect: 113216683679.65892
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | intersect: 113216683679.65892
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | chi2: 0.9195343069616055
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | current chi2=0.9195343069616055 (change=0.8244636959121386 %)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,092 | INFO     | left removable region: 20
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | sum of square deviations: 152858680.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | sum of deviations: -3520019823.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | mean x: 1760293456.0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | mean y: 2296875.9873417723
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | -- intersect: 40538221034.28295
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | intersect: 40538221034.28295
[2025-10-12 15:11:32] 2025-10-12 19:10:47,093 | INFO     | chi2: 0.1511376798264207
[2025-10-12 15:11:32] 2025-10-12 19:10:47,094 | INFO     | -- intersect: 40538221034.28295
[2025-10-12 15:11:32] 2025-10-12 19:10:47,094 | INFO     | current memory leak: -23.03 B/s (using 79 data points, chi2=0.15)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,094 | INFO     | could have reported an average CPU frequency of 3534 MHz (7 samples)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,094 | INFO     | ..............................
[2025-10-12 15:11:32] 2025-10-12 19:10:47,094 | INFO     | . Timing measurements:
[2025-10-12 15:11:32] 2025-10-12 19:10:47,094 | INFO     | . get job = 0 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,095 | INFO     | . initial setup = 3 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,095 | INFO     | . payload setup = 17 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,100 | INFO     | . stage-in = 0 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,100 | INFO     | . payload execution = 6377 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,102 | INFO     | . stage-out = 1 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,103 | INFO     | . log creation = 0 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,103 | INFO     | ..............................
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | 
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | job summary report
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | --------------------------------------------------
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | PanDA job id: 6840223806
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | task id: 46676269
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | errors: (none)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:11:32] 2025-10-12 19:10:47,230 | INFO     | pilot state: finished 
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | transexitcode: 0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | exeerrorcode: 0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | exeerrordiag: 
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | exitcode: 0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | exitmsg: OK
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | cpuconsumptiontime: 28968 s
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | nevents: 400
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | neventsw: 0
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | pid: 685162
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | pgrp: 685162
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | corecount: 8
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | event service: False
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | sizes: {0: 2348857, 1: 2348857, 11: 2348885, 13: 2349175, 22: 2349231, 6398: 2376346, 6399: 2376473, 6400: 2385527, 6403: 2385583, 6420: 2385777}
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | --------------------------------------------------
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | 
[2025-10-12 15:11:32] 2025-10-12 19:10:47,231 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:11:32] 2025-10-12 19:10:47,265 | INFO     | job 6840223806 has completed (purged errors)
[2025-10-12 15:11:32] 2025-10-12 19:10:47,265 | INFO     | overall cleanup function is called
[2025-10-12 15:11:32] 2025-10-12 19:10:48,273 | INFO     | --- collectZombieJob: --- 10, [685162]
[2025-10-12 15:11:32] 2025-10-12 19:10:48,273 | INFO     | zombie collector waiting for pid 685162
[2025-10-12 15:11:32] 2025-10-12 19:10:48,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:11:32] 2025-10-12 19:10:48,273 | INFO     | collected zombie processes
[2025-10-12 15:11:32] 2025-10-12 19:10:48,273 | INFO     | will attempt to kill all subprocesses of pid=685162
[2025-10-12 15:11:32] 2025-10-12 19:10:49,806 | INFO     | process IDs to be killed: [685162] (in reverse order)
[2025-10-12 15:11:32] 2025-10-12 19:10:50,055 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:11:32] 2025-10-12 19:10:50,056 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:11:32] 2025-10-12 19:10:50,088 | INFO     | did not find any defunct processes belonging to 685162
[2025-10-12 15:11:32] 2025-10-12 19:10:50,185 | INFO     | did not find any defunct processes belonging to 685162
[2025-10-12 15:11:32] 2025-10-12 19:10:50,186 | INFO     | ready for new job
[2025-10-12 15:11:32] 2025-10-12 19:10:50,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:11:32] 2025-10-12 19:10:50,187 | INFO     | ***************************************
[2025-10-12 15:11:32] 2025-10-12 19:10:50,187 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:11:32] 2025-10-12 19:10:50,187 | INFO     | ***************************************
[2025-10-12 15:11:32] 2025-10-12 19:10:50,187 | INFO     | 
[2025-10-12 15:11:32] 2025-10-12 19:10:50,217 | INFO     | architecture information:
[2025-10-12 15:11:32] 2025-10-12 19:10:50,217 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:11:32] 2025-10-12 19:10:50,233 | INFO     | cat /etc/os-release:
[2025-10-12 15:11:32] NAME="CentOS Linux"
[2025-10-12 15:11:32] VERSION="7 (Core)"
[2025-10-12 15:11:32] ID="centos"
[2025-10-12 15:11:32] ID_LIKE="rhel fedora"
[2025-10-12 15:11:32] VERSION_ID="7"
[2025-10-12 15:11:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:11:32] ANSI_COLOR="0;31"
[2025-10-12 15:11:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:11:32] HOME_URL="https://www.centos.org/"
[2025-10-12 15:11:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:11:32] 
[2025-10-12 15:11:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:11:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:11:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:11:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:11:32] 
[2025-10-12 15:11:32] 2025-10-12 19:10:50,233 | INFO     | ***************************************
[2025-10-12 15:11:32] 2025-10-12 19:10:50,738 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 15:11:32] 2025-10-12 19:10:50,863 | INFO     | sufficient remaining disk space (73599549440 B)
[2025-10-12 15:11:32] 2025-10-12 19:10:50,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:11:32] 2025-10-12 19:10:50,864 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:11:32] 2025-10-12 19:10:50,864 | INFO     | update_server=False
[2025-10-12 15:11:32] 2025-10-12 19:10:50,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:11:32] 2025-10-12 19:10:51,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:11:32] 2025-10-12 19:10:51,290 | INFO     | aborting loop
[2025-10-12 15:11:32] 2025-10-12 19:10:51,381 | INFO     | all job control threads have been joined
[2025-10-12 15:11:32] 2025-10-12 19:10:51,608 | INFO     | all data control threads have been joined
[2025-10-12 15:11:32] 2025-10-12 19:10:51,870 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:51,934 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,134 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,192 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:11:32] 2025-10-12 19:10:52,262 | INFO     | all payload control threads have been joined
[2025-10-12 15:11:32] 2025-10-12 19:10:52,306 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:11:32] 2025-10-12 19:10:52,391 | INFO     | [job] control thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,446 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,618 | INFO     | [data] control thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,820 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:52,883 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:53,077 | INFO     | [job] validate thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:53,230 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:53,275 | INFO     | [payload] control thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:53,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:11:32] 2025-10-12 19:10:54,348 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:10:57,724 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:11:01,004 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:11:32] 2025-10-12 19:11:02,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:11:32] 2025-10-12 19:11:20,310 | INFO     | PID=670537 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 15:11:32] 2025-10-12 19:11:20,310 | INFO     | .. there are 79 such processes running
[2025-10-12 15:11:32] 2025-10-12 19:11:20,311 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:11:32] 2025-10-12 19:11:20,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:11:32] 2025-10-12 19:11:20,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:11:32] 2025-10-12 19:11:24,363 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:11:32] 2025-10-12 19:11:26,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941007832896)>', '<ExcThread(monitor, started 139940654454528)>']
[2025-10-12 15:11:32] 2025-10-12 19:11:27,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:11:32] 2025-10-12 19:11:27,357 | INFO     | [monitor] control thread has ended
[2025-10-12 15:11:32] 2025-10-12 19:11:31,391 | INFO     | all workflow threads have been joined
[2025-10-12 15:11:32] 2025-10-12 19:11:31,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:11:32] 2025-10-12 19:11:31,412 | INFO     | traces error code: 0
[2025-10-12 15:11:32] 2025-10-12 19:11:31,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:11:32] 2025-10-12 19:11:31,729 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:11:32] 2025-10-12 19:11:31,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:11:32] 2025-10-12 19:11:31,768 [wrapper] pilotpid: 670537
[2025-10-12 15:11:32] 2025-10-12 19:11:31,811 [wrapper] Pilot exit status: 0
[2025-10-12 15:11:32] 2025-10-12 19:11:31,900 [wrapper] pandaids: 6840223806
[2025-10-12 15:11:32] 2025-10-12 19:11:32,079 [wrapper] cleanup supervisor_pilot 2091453 670538
[2025-10-12 15:11:32] 2025-10-12 19:11:32,083 [wrapper] Test setup, not cleaning
[2025-10-12 15:11:32] 2025-10-12 19:11:32,132 [wrapper] apfmon messages muted
[2025-10-12 15:11:32] 2025-10-12 19:11:32,161 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:11:32] 2025-10-12 19:11:32,195 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:11:32]  *** Error codes and diagnostics ***
[2025-10-12 15:11:32]     "exeErrorCode": 0,
[2025-10-12 15:11:32]     "exeErrorDiag": "",
[2025-10-12 15:11:32]     "pilotErrorCode": 0,
[2025-10-12 15:11:32]     "pilotErrorDiag": "",
[2025-10-12 15:11:32]  *** Listing of results directory ***
[2025-10-12 15:11:32] total 411824
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:15 queuedata.json
[2025-10-12 15:11:32] -rwx------. 1 boincer umatlas     36292 Oct 12 11:15 runpilot2-wrapper.sh
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:11:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:22 run_atlas
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:22 job.xml
[2025-10-12 15:11:32] -rw-r--r--. 2 boincer umatlas 219948169 Oct 12 13:22 EVNT.46676267._004558.pool.root.1
[2025-10-12 15:11:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 15:11:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:22 shared
[2025-10-12 15:11:32] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 13:22 input.tar.gz
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:22 boinc_lockfile
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:22 pandaJob.out
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas    975528 Oct 12 13:23 agis_schedconf.cvmfs.json
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:11:32] drwx------. 5 boincer umatlas      4096 Oct 12 13:23 pilot3
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas 195328094 Oct 12 15:09 HITS.46676269._081910.pool.root.1
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas       529 Oct 12 15:09 boinc_task_state.xml
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas      6934 Oct 12 15:10 init_data.xml
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas      1034 Oct 12 15:10 memory_monitor_summary.json
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas    367089 Oct 12 15:10 log.46676269._081910.job.log.tgz.1
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas      7780 Oct 12 15:10 heartbeat.json
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas        95 Oct 12 15:11 pilot_heartbeat.json
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:11 wrapper_checkpoint.txt
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:11 boinc_mmap_file
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas      4895 Oct 12 15:11 pilotlog.txt
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas    893712 Oct 12 15:11 log.46676269._081910.job.log.1
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas       357 Oct 12 15:11 output.list
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:11 runtime_log
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas   1280000 Oct 12 15:11 result.tar.gz
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas       652 Oct 12 15:11 VwTKDmQyCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5EUMDmDZIXEm.diag
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 15:11 runtime_log.err
[2025-10-12 15:11:32] -rw-r--r--. 1 boincer umatlas     21039 Oct 12 15:11 stderr.txt
[2025-10-12 15:11:32] HITS file was successfully produced:
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas 195328094 Oct 12 15:09 shared/HITS.pool.root.1
[2025-10-12 15:11:32]  *** Contents of shared directory: ***
[2025-10-12 15:11:32] total 407384
[2025-10-12 15:11:32] -rw-r--r--. 2 boincer umatlas 219948169 Oct 12 13:22 ATLAS.root_0
[2025-10-12 15:11:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 15:11:32] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 13:22 input.tar.gz
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas 195328094 Oct 12 15:09 HITS.pool.root.1
[2025-10-12 15:11:32] -rw-------. 1 boincer umatlas   1280000 Oct 12 15:11 result.tar.gz
15:11:34 (662424): run_atlas exited; CPU time 29129.192123
15:11:34 (662424): called boinc_finish(0)

</stderr_txt>
]]>

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