Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:59:08 (15586): wrapper (7.7.26015): starting
02:59:08 (15586): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:59:08] Arguments: --nthreads 8
[2025-10-13 02:59:08] Threads: 8
[2025-10-13 02:59:08] Checking for CVMFS
[2025-10-13 02:59:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:59:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:59:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:59:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:59:11] 2.11.2.0 11804 21018 81192 151642 1 61 15954343 25165824 4632 130560 0 5023447 99.958 1933192 1385 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 02:59:11] CVMFS is ok
[2025-10-13 02:59:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:59:11] Checking for apptainer binary...
[2025-10-13 02:59:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:59:11] Running /usr/bin/apptainer --version
[2025-10-13 02:59:11] apptainer version 1.3.2-1.el7
[2025-10-13 02:59:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:59:21] cg-vwn390.simple-grid.lan
[2025-10-13 02:59:21] apptainer works
[2025-10-13 02:59:21] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:59:21] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:59:21] Starting ATLAS job with PandaID=6839989818
[2025-10-13 02:59:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:14:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:14:16] 2025-10-13 05:13:39,829 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:14:16] 2025-10-13 05:13:39,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:14:16] 2025-10-13 05:13:39,834 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:14:16] 2025-10-13 05:13:39,835 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,837 | INFO     | sum of deviations: 79197925589.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,837 | INFO     | mean x: 1760325113.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,837 | INFO     | mean y: 2446100.5690376568
[2025-10-13 07:14:16] 2025-10-13 05:13:39,838 | INFO     | -- intersect: -32931378439.157383
[2025-10-13 07:14:16] 2025-10-13 05:13:39,838 | INFO     | intersect: -32931378439.157383
[2025-10-13 07:14:16] 2025-10-13 05:13:39,838 | INFO     | chi2: 7.347488921082888
[2025-10-13 07:14:16] 2025-10-13 05:13:39,839 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 07:14:16] 2025-10-13 05:13:39,840 | INFO     | sum of deviations: 93480668230.99998
[2025-10-13 07:14:16] 2025-10-13 05:13:39,841 | INFO     | mean x: 1760324960.5
[2025-10-13 07:14:16] 2025-10-13 05:13:39,841 | INFO     | mean y: 2454314.9914529915
[2025-10-13 07:14:16] 2025-10-13 05:13:39,841 | INFO     | -- intersect: -41416257793.08892
[2025-10-13 07:14:16] 2025-10-13 05:13:39,841 | INFO     | intersect: -41416257793.08892
[2025-10-13 07:14:16] 2025-10-13 05:13:39,841 | INFO     | chi2: 6.636907575248347
[2025-10-13 07:14:16] 2025-10-13 05:13:39,842 | INFO     | current chi2=6.636907575248347 (change=9.671077472408285 %)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,842 | INFO     | right removable region: 233
[2025-10-13 07:14:16] 2025-10-13 05:13:39,842 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 07:14:16] 2025-10-13 05:13:39,844 | INFO     | sum of deviations: -3399675424.0000114
[2025-10-13 07:14:16] 2025-10-13 05:13:39,844 | INFO     | mean x: 1760325265.5
[2025-10-13 07:14:16] 2025-10-13 05:13:39,844 | INFO     | mean y: 2494476.1965811965
[2025-10-13 07:14:16] 2025-10-13 05:13:39,844 | INFO     | -- intersect: 1508797380.417117
[2025-10-13 07:14:16] 2025-10-13 05:13:39,845 | INFO     | intersect: 1508797380.417117
[2025-10-13 07:14:16] 2025-10-13 05:13:39,845 | INFO     | chi2: 2.5116375449902355
[2025-10-13 07:14:16] 2025-10-13 05:13:39,845 | INFO     | current chi2=2.5116375449902355 (change=65.81638200524071 %)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,845 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,847 | INFO     | sum of deviations: -47763513254.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,847 | INFO     | mean x: 1760325418.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,847 | INFO     | mean y: 2521469.965065502
[2025-10-13 07:14:16] 2025-10-13 05:13:39,848 | INFO     | -- intersect: 22581933805.059906
[2025-10-13 07:14:16] 2025-10-13 05:13:39,848 | INFO     | intersect: 22581933805.059906
[2025-10-13 07:14:16] 2025-10-13 05:13:39,848 | INFO     | chi2: 0.9115603028267719
[2025-10-13 07:14:16] 2025-10-13 05:13:39,848 | INFO     | current chi2=0.9115603028267719 (change=63.706534621407094 %)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,849 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,850 | INFO     | sum of deviations: -49559708518.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,850 | INFO     | mean x: 1760325570.5
[2025-10-13 07:14:16] 2025-10-13 05:13:39,850 | INFO     | mean y: 2522580.1875
[2025-10-13 07:14:16] 2025-10-13 05:13:39,851 | INFO     | -- intersect: 25035235427.36219
[2025-10-13 07:14:16] 2025-10-13 05:13:39,851 | INFO     | intersect: 25035235427.36219
[2025-10-13 07:14:16] 2025-10-13 05:13:39,851 | INFO     | chi2: 0.8832461682678675
[2025-10-13 07:14:16] 2025-10-13 05:13:39,851 | INFO     | current chi2=0.8832461682678675 (change=3.106117551532417 %)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,851 | INFO     | left removable region: 30
[2025-10-13 07:14:16] 2025-10-13 05:13:39,852 | INFO     | sum of square deviations: 2593916542.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,853 | INFO     | sum of deviations: -22208417741.999996
[2025-10-13 07:14:16] 2025-10-13 05:13:39,853 | INFO     | mean x: 1760325845.0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,854 | INFO     | mean y: 2524926.793103448
[2025-10-13 07:14:16] 2025-10-13 05:13:39,854 | INFO     | -- intersect: 15073962690.807
[2025-10-13 07:14:16] 2025-10-13 05:13:39,854 | INFO     | intersect: 15073962690.807
[2025-10-13 07:14:16] 2025-10-13 05:13:39,854 | INFO     | chi2: 0.08068993568202773
[2025-10-13 07:14:16] 2025-10-13 05:13:39,854 | INFO     | -- intersect: 15073962690.807
[2025-10-13 07:14:16] 2025-10-13 05:13:39,854 | INFO     | current memory leak: -8.56 B/s (using 203 data points, chi2=0.08)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,855 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,855 | INFO     | ..............................
[2025-10-13 07:14:16] 2025-10-13 05:13:39,855 | INFO     | . Timing measurements:
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . get job = 0 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . initial setup = 8 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . payload setup = 136 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . stage-in = 0 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . payload execution = 14698 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . stage-out = 1 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | . log creation = 0 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,856 | INFO     | ..............................
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | 
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | job summary report
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | --------------------------------------------------
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | PanDA job id: 6839989818
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | task id: 46676269
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | errors: (none)
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | pilot state: finished 
[2025-10-13 07:14:16] 2025-10-13 05:13:39,979 | INFO     | transexitcode: 0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | exeerrorcode: 0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | exeerrordiag: 
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | exitcode: 0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | exitmsg: OK
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | cpuconsumptiontime: 54419 s
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | nevents: 400
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | neventsw: 0
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | pid: 25885
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | pgrp: 25885
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | corecount: 8
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | event service: False
[2025-10-13 07:14:16] 2025-10-13 05:13:39,980 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 13: 2348912, 23: 2348968, 34: 2348996, 45: 2349152, 55: 2349180, 66: 2349208, 77: 2349236, 88: 2349292, 98: 2349802, 99
[2025-10-13 07:14:16] 2025-10-13 05:13:39,981 | INFO     | --------------------------------------------------
[2025-10-13 07:14:16] 2025-10-13 05:13:39,981 | INFO     | 
[2025-10-13 07:14:16] 2025-10-13 05:13:39,981 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-13 07:14:16] 2025-10-13 05:13:40,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,015 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,015 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:14:16] 2025-10-13 05:13:40,017 | INFO     | job 6839989818 has completed (purged errors)
[2025-10-13 07:14:16] 2025-10-13 05:13:40,018 | INFO     | overall cleanup function is called
[2025-10-13 07:14:16] 2025-10-13 05:13:41,026 | INFO     | --- collectZombieJob: --- 10, [25885]
[2025-10-13 07:14:16] 2025-10-13 05:13:41,027 | INFO     | zombie collector waiting for pid 25885
[2025-10-13 07:14:16] 2025-10-13 05:13:41,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:14:16] 2025-10-13 05:13:41,027 | INFO     | collected zombie processes
[2025-10-13 07:14:16] 2025-10-13 05:13:41,027 | INFO     | will attempt to kill all subprocesses of pid=25885
[2025-10-13 07:14:16] 2025-10-13 05:13:41,134 | INFO     | process IDs to be killed: [25885] (in reverse order)
[2025-10-13 07:14:16] 2025-10-13 05:13:41,436 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:14:16] 2025-10-13 05:13:41,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:14:16] 2025-10-13 05:13:41,440 | INFO     | did not find any defunct processes belonging to 25885
[2025-10-13 07:14:16] 2025-10-13 05:13:41,444 | INFO     | did not find any defunct processes belonging to 25885
[2025-10-13 07:14:16] 2025-10-13 05:13:41,444 | INFO     | ready for new job
[2025-10-13 07:14:16] 2025-10-13 05:13:41,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:14:16] 2025-10-13 05:13:41,446 | INFO     | ***************************************
[2025-10-13 07:14:16] 2025-10-13 05:13:41,447 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:14:16] 2025-10-13 05:13:41,447 | INFO     | ***************************************
[2025-10-13 07:14:16] 2025-10-13 05:13:41,447 | INFO     | 
[2025-10-13 07:14:16] 2025-10-13 05:13:41,448 | INFO     | pilot is running in a VM
[2025-10-13 07:14:16] 2025-10-13 05:13:41,448 | INFO     | architecture information:
[2025-10-13 07:14:16] 2025-10-13 05:13:41,448 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:14:16] 2025-10-13 05:13:41,469 | INFO     | cat /etc/os-release:
[2025-10-13 07:14:16] NAME="CentOS Linux"
[2025-10-13 07:14:16] VERSION="7 (Core)"
[2025-10-13 07:14:16] ID="centos"
[2025-10-13 07:14:16] ID_LIKE="rhel fedora"
[2025-10-13 07:14:16] VERSION_ID="7"
[2025-10-13 07:14:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:14:16] ANSI_COLOR="0;31"
[2025-10-13 07:14:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:14:16] HOME_URL="https://www.centos.org/"
[2025-10-13 07:14:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:14:16] 
[2025-10-13 07:14:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:14:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:14:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:14:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:14:16] 
[2025-10-13 07:14:16] 2025-10-13 05:13:41,469 | INFO     | ***************************************
[2025-10-13 07:14:16] 2025-10-13 05:13:41,973 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-13 07:14:16] 2025-10-13 05:13:42,064 | INFO     | sufficient remaining disk space (495769878528 B)
[2025-10-13 07:14:16] 2025-10-13 05:13:42,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:14:16] 2025-10-13 05:13:42,065 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:14:16] 2025-10-13 05:13:42,065 | INFO     | update_server=False
[2025-10-13 07:14:16] 2025-10-13 05:13:42,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:14:16] 2025-10-13 05:13:42,067 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:14:16] 2025-10-13 05:13:42,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:14:16] 2025-10-13 05:13:42,068 | INFO     | aborting loop
[2025-10-13 07:14:16] 2025-10-13 05:13:42,359 | INFO     | all data control threads have been joined
[2025-10-13 07:14:16] 2025-10-13 05:13:42,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:14:16] 2025-10-13 05:13:43,071 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,073 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,145 | INFO     | all payload control threads have been joined
[2025-10-13 07:14:16] 2025-10-13 05:13:43,365 | INFO     | [data] control thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,434 | INFO     | all job control threads have been joined
[2025-10-13 07:14:16] 2025-10-13 05:13:43,515 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,530 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,580 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,658 | INFO     | [job] validate thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,664 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,718 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:43,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:44,151 | INFO     | [payload] control thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:44,399 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:44,440 | INFO     | [job] control thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:44,609 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:44,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:14:16] 2025-10-13 05:13:45,998 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:13:46,075 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:14:16] 2025-10-13 05:14:06,055 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:14:16] 2025-10-13 05:14:06,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318828726080)>', '<ExcThread(monitor, started 140318099883776)>']
[2025-10-13 07:14:16] 2025-10-13 05:14:11,627 | INFO     | PID=19380 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:14:16] 2025-10-13 05:14:11,628 | INFO     | .. there are 9 such processes running
[2025-10-13 07:14:16] 2025-10-13 05:14:11,628 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:14:16] 2025-10-13 05:14:11,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:14:16] 2025-10-13 05:14:11,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:14:16] 2025-10-13 05:14:11,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:14:16] 2025-10-13 05:14:11,629 | INFO     | [monitor] control thread has ended
[2025-10-13 07:14:16] 2025-10-13 05:14:11,731 | INFO     | all workflow threads have been joined
[2025-10-13 07:14:16] 2025-10-13 05:14:11,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:14:16] 2025-10-13 05:14:11,732 | INFO     | traces error code: 0
[2025-10-13 07:14:16] 2025-10-13 05:14:11,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:14:16] 2025-10-13 05:14:12,154 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:14:16] 2025-10-13 05:14:12,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:14:16] 2025-10-13 05:14:12,460 [wrapper] pilotpid: 19380
[2025-10-13 07:14:16] 2025-10-13 05:14:12,555 [wrapper] Pilot exit status: 0
[2025-10-13 07:14:16] 2025-10-13 05:14:13,170 [wrapper] pandaids: 6839989818
[2025-10-13 07:14:16] 2025-10-13 05:14:14,372 [wrapper] cleanup supervisor_pilot  5972 19381
[2025-10-13 07:14:16] 2025-10-13 05:14:14,444 [wrapper] Test setup, not cleaning
[2025-10-13 07:14:16] 2025-10-13 05:14:14,550 [wrapper] apfmon messages muted
[2025-10-13 07:14:16] 2025-10-13 05:14:14,653 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:14:16] 2025-10-13 05:14:14,722 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:14:16]  *** Error codes and diagnostics ***
[2025-10-13 07:14:16]     "exeErrorCode": 0,
[2025-10-13 07:14:16]     "exeErrorDiag": "",
[2025-10-13 07:14:16]     "pilotErrorCode": 0,
[2025-10-13 07:14:16]     "pilotErrorDiag": "",
[2025-10-13 07:14:16]  *** Listing of results directory ***
[2025-10-13 07:14:16] total 414452
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc      5112 Oct 12 15:05 queuedata.json
[2025-10-13 07:14:16] -rwx------. 1 boinc boinc     36292 Oct 12 15:05 runpilot2-wrapper.sh
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:05 pilot3.tar.gz
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc       100 Oct 13 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:14:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 02:59 run_atlas
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc       105 Oct 13 02:59 job.xml
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc      6390 Oct 13 02:59 init_data.xml
[2025-10-13 07:14:16] -rw-r--r--. 2 boinc boinc 220828865 Oct 13 02:59 EVNT.46676267._003853.pool.root.1
[2025-10-13 07:14:16] -rw-r--r--. 2 boinc boinc     15120 Oct 13 02:59 start_atlas.sh
[2025-10-13 07:14:16] drwxrwx--x. 2 boinc boinc        68 Oct 13 02:59 shared
[2025-10-13 07:14:16] -rw-r--r--. 2 boinc boinc    569681 Oct 13 02:59 input.tar.gz
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc         0 Oct 13 02:59 boinc_lockfile
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc      2549 Oct 13 02:59 pandaJob.out
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc    975603 Oct 13 03:02 agis_schedconf.cvmfs.json
[2025-10-13 07:14:16] drwx------. 5 boinc boinc      4096 Oct 13 03:02 pilot3
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc 194699493 Oct 13 07:12 HITS.46676269._079150.pool.root.1
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc       531 Oct 13 07:12 boinc_task_state.xml
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc      1019 Oct 13 07:13 memory_monitor_summary.json
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc   1560580 Oct 13 07:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc    472877 Oct 13 07:13 log.46676269._079150.job.log.tgz.1
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc        95 Oct 13 07:13 pilot_heartbeat.json
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc      7787 Oct 13 07:13 heartbeat.json
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc        28 Oct 13 07:13 wrapper_checkpoint.txt
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc      8192 Oct 13 07:13 boinc_mmap_file
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc      4884 Oct 13 07:14 pilotlog.txt
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc   2014823 Oct 13 07:14 log.46676269._079150.job.log.1
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc       357 Oct 13 07:14 output.list
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc       620 Oct 13 07:14 runtime_log
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc   2508800 Oct 13 07:14 result.tar.gz
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc       657 Oct 13 07:14 sa0KDmtwAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4xTMDmBRChem.diag
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc      8703 Oct 13 07:14 runtime_log.err
[2025-10-13 07:14:16] -rw-r--r--. 1 boinc boinc     20590 Oct 13 07:14 stderr.txt
[2025-10-13 07:14:16] HITS file was successfully produced:
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc 194699493 Oct 13 07:12 shared/HITS.pool.root.1
[2025-10-13 07:14:16]  *** Contents of shared directory: ***
[2025-10-13 07:14:16] total 408824
[2025-10-13 07:14:16] -rw-r--r--. 2 boinc boinc 220828865 Oct 13 02:59 ATLAS.root_0
[2025-10-13 07:14:16] -rw-r--r--. 2 boinc boinc     15120 Oct 13 02:59 start_atlas.sh
[2025-10-13 07:14:16] -rw-r--r--. 2 boinc boinc    569681 Oct 13 02:59 input.tar.gz
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc 194699493 Oct 13 07:12 HITS.pool.root.1
[2025-10-13 07:14:16] -rw-------. 1 boinc boinc   2508800 Oct 13 07:14 result.tar.gz
07:14:18 (15586): run_atlas exited; CPU time 54627.021679
07:14:18 (15586): called boinc_finish(0)

</stderr_txt>
]]>

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