Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:47 (3199394): wrapper (7.7.26015): starting
17:01:47 (3199394): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 17:01:47] Arguments: --nthreads 9
[2025-10-12 17:01:48] Threads: 9
[2025-10-12 17:01:48] Checking for CVMFS
[2025-10-12 17:01:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:01:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:01:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:01:50] 2.13.2.0 850183 129756 486472 151636 2 449 18549453 32935937 28616 16776704 0 260257260 99.612 259116607 21076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 17:01:50] CVMFS is ok
[2025-10-12 17:01:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:01:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:01:50] Further information can be found at the LHC@home message board.
[2025-10-12 17:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:01:50] Checking for apptainer binary...
[2025-10-12 17:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:01:50] Running /usr/bin/apptainer --version
[2025-10-12 17:01:50] apptainer version 1.4.3-1.el9
[2025-10-12 17:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:01:51] c6-12-29-2.aglt2.org
[2025-10-12 17:01:51] apptainer works
[2025-10-12 17:01:51] Set ATHENA_PROC_NUMBER=9
[2025-10-12 17:01:51] Set ATHENA_CORE_NUMBER=9
[2025-10-12 17:01:51] Starting ATLAS job with PandaID=6840223815
[2025-10-12 17:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:20:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:20:10] 2025-10-13 05:19:16,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:20:10] 2025-10-13 05:19:16,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:20:10] 2025-10-13 05:19:16,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:20:10] 2025-10-13 05:19:16,279 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:20:10] 2025-10-13 05:19:16,298 | INFO     | sum of square deviations: 35376058671.01838
[2025-10-13 01:20:10] 2025-10-13 05:19:16,325 | INFO     | sum of deviations: 56481987880.29692
[2025-10-13 01:20:10] 2025-10-13 05:19:16,325 | INFO     | mean x: 1760317901.9360824
[2025-10-13 01:20:10] 2025-10-13 05:19:16,325 | INFO     | mean y: 2263859.9773195875
[2025-10-13 01:20:10] 2025-10-13 05:19:16,325 | INFO     | -- intersect: -2808288195.220335
[2025-10-13 01:20:10] 2025-10-13 05:19:16,325 | INFO     | intersect: -2808288195.220335
[2025-10-13 01:20:10] 2025-10-13 05:19:16,331 | INFO     | chi2: 5.900328127500282
[2025-10-13 01:20:10] 2025-10-13 05:19:16,333 | INFO     | sum of square deviations: 34293290244.366825
[2025-10-13 01:20:10] 2025-10-13 05:19:16,342 | INFO     | sum of deviations: 173907511764.7085
[2025-10-13 01:20:10] 2025-10-13 05:19:16,343 | INFO     | mean x: 1760317749.4416666
[2025-10-13 01:20:10] 2025-10-13 05:19:16,343 | INFO     | mean y: 2280367.1145833335
[2025-10-13 01:20:10] 2025-10-13 05:19:16,343 | INFO     | -- intersect: -8924611090.054316
[2025-10-13 01:20:10] 2025-10-13 05:19:16,343 | INFO     | intersect: -8924611090.054316
[2025-10-13 01:20:10] 2025-10-13 05:19:16,348 | INFO     | chi2: 2.7746271049264863
[2025-10-13 01:20:10] 2025-10-13 05:19:16,349 | INFO     | current chi2=2.7746271049264863 (change=52.97503723573459 %)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,349 | INFO     | sum of square deviations: 33232759370.349537
[2025-10-13 01:20:10] 2025-10-13 05:19:16,357 | INFO     | sum of deviations: 173716124805.56418
[2025-10-13 01:20:10] 2025-10-13 05:19:16,362 | INFO     | mean x: 1760317596.9410527
[2025-10-13 01:20:10] 2025-10-13 05:19:16,362 | INFO     | mean y: 2280339.5915789474
[2025-10-13 01:20:10] 2025-10-13 05:19:16,362 | INFO     | -- intersect: -9199349532.903309
[2025-10-13 01:20:10] 2025-10-13 05:19:16,362 | INFO     | intersect: -9199349532.903309
[2025-10-13 01:20:10] 2025-10-13 05:19:16,363 | INFO     | chi2: 2.772990972886408
[2025-10-13 01:20:10] 2025-10-13 05:19:16,363 | INFO     | current chi2=2.772990972886408 (change=0.05896763702673288 %)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,363 | INFO     | right removable region: 474
[2025-10-13 01:20:10] 2025-10-13 05:19:16,364 | INFO     | sum of square deviations: 34293071986.59163
[2025-10-13 01:20:10] 2025-10-13 05:19:16,377 | INFO     | sum of deviations: -51394402690.8166
[2025-10-13 01:20:10] 2025-10-13 05:19:16,381 | INFO     | mean x: 1760318054.4458334
[2025-10-13 01:20:10] 2025-10-13 05:19:16,382 | INFO     | mean y: 2279016.8916666666
[2025-10-13 01:20:10] 2025-10-13 05:19:16,382 | INFO     | -- intersect: 2640435639.006984
[2025-10-13 01:20:10] 2025-10-13 05:19:16,382 | INFO     | intersect: 2640435639.006984
[2025-10-13 01:20:10] 2025-10-13 05:19:16,383 | INFO     | chi2: 3.4992755086984895
[2025-10-13 01:20:10] 2025-10-13 05:19:16,383 | INFO     | current chi2=3.4992755086984895 (change=40.69354393378486 %)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,384 | INFO     | sum of square deviations: 33232411302.071484
[2025-10-13 01:20:10] 2025-10-13 05:19:16,397 | INFO     | sum of deviations: -80888970642.56845
[2025-10-13 01:20:10] 2025-10-13 05:19:16,398 | INFO     | mean x: 1760318206.9557896
[2025-10-13 01:20:10] 2025-10-13 05:19:16,398 | INFO     | mean y: 2283248.1157894735
[2025-10-13 01:20:10] 2025-10-13 05:19:16,398 | INFO     | -- intersect: 4286965646.56546
[2025-10-13 01:20:10] 2025-10-13 05:19:16,398 | INFO     | intersect: 4286965646.56546
[2025-10-13 01:20:10] 2025-10-13 05:19:16,399 | INFO     | chi2: 3.318289977061525
[2025-10-13 01:20:10] 2025-10-13 05:19:16,399 | INFO     | current chi2=3.318289977061525 (change=5.172085798533756 %)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,399 | INFO     | left removable region: 20
[2025-10-13 01:20:10] 2025-10-13 05:19:16,400 | INFO     | sum of square deviations: 29016628667.182808
[2025-10-13 01:20:10] 2025-10-13 05:19:16,413 | INFO     | sum of deviations: 17731699590.552837
[2025-10-13 01:20:10] 2025-10-13 05:19:16,413 | INFO     | mean x: 1760318176.4735682
[2025-10-13 01:20:10] 2025-10-13 05:19:16,413 | INFO     | mean y: 2303514.504405286
[2025-10-13 01:20:10] 2025-10-13 05:19:16,413 | INFO     | -- intersect: -1073404950.7012999
[2025-10-13 01:20:10] 2025-10-13 05:19:16,413 | INFO     | intersect: -1073404950.7012999
[2025-10-13 01:20:10] 2025-10-13 05:19:16,414 | INFO     | chi2: 0.042453127117610706
[2025-10-13 01:20:10] 2025-10-13 05:19:16,414 | INFO     | -- intersect: -1073404950.7012999
[2025-10-13 01:20:10] 2025-10-13 05:19:16,415 | INFO     | current memory leak: 0.61 B/s (using 454 data points, chi2=0.04)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,416 | INFO     | could have reported an average CPU frequency of 2554 MHz (20 samples)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,416 | INFO     | ..............................
[2025-10-13 01:20:10] 2025-10-13 05:19:16,416 | INFO     | . Timing measurements:
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . get job = 0 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . initial setup = 4 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . payload setup = 43 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . stage-in = 0 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . payload execution = 29577 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . stage-out = 11 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | . log creation = 2 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,421 | INFO     | ..............................
[2025-10-13 01:20:10] 2025-10-13 05:19:16,656 | INFO     | 
[2025-10-13 01:20:10] 2025-10-13 05:19:16,657 | INFO     | job summary report
[2025-10-13 01:20:10] 2025-10-13 05:19:16,657 | INFO     | --------------------------------------------------
[2025-10-13 01:20:10] 2025-10-13 05:19:16,657 | INFO     | PanDA job id: 6840223815
[2025-10-13 01:20:10] 2025-10-13 05:19:16,657 | INFO     | task id: 46676269
[2025-10-13 01:20:10] 2025-10-13 05:19:16,657 | INFO     | errors: (none)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | pilot state: finished 
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | transexitcode: 0
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | exeerrorcode: 0
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | exeerrordiag: 
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | exitcode: 0
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | exitmsg: OK
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | cpuconsumptiontime: 55788 s
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | nevents: 400
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | neventsw: 0
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | pid: 3224872
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | pgrp: 3224872
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | corecount: 9
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | event service: False
[2025-10-13 01:20:10] 2025-10-13 05:19:16,658 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348714, 3: 2348941, 4: 2348941, 15: 2348969, 26: 2349125, 36: 2349415, 37: 2349443, 29626: 2386521, 29640: 2395519, 29644: 2395
[2025-10-13 01:20:10] 2025-10-13 05:19:16,659 | INFO     | --------------------------------------------------
[2025-10-13 01:20:10] 2025-10-13 05:19:16,659 | INFO     | 
[2025-10-13 01:20:10] 2025-10-13 05:19:16,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 01:20:10] 2025-10-13 05:19:16,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,788 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:20:10] 2025-10-13 05:19:16,789 | INFO     | job 6840223815 has completed (purged errors)
[2025-10-13 01:20:10] 2025-10-13 05:19:16,789 | INFO     | overall cleanup function is called
[2025-10-13 01:20:10] 2025-10-13 05:19:17,806 | INFO     | --- collectZombieJob: --- 10, [3224872]
[2025-10-13 01:20:10] 2025-10-13 05:19:17,807 | INFO     | zombie collector waiting for pid 3224872
[2025-10-13 01:20:10] 2025-10-13 05:19:17,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:20:10] 2025-10-13 05:19:17,807 | INFO     | collected zombie processes
[2025-10-13 01:20:10] 2025-10-13 05:19:17,807 | INFO     | will attempt to kill all subprocesses of pid=3224872
[2025-10-13 01:20:10] 2025-10-13 05:19:21,925 | INFO     | process IDs to be killed: [3224872] (in reverse order)
[2025-10-13 01:20:10] 2025-10-13 05:19:23,009 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:20:10] 2025-10-13 05:19:23,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:20:10] 2025-10-13 05:19:23,188 | INFO     | did not find any defunct processes belonging to 3224872
[2025-10-13 01:20:10] 2025-10-13 05:19:23,300 | INFO     | did not find any defunct processes belonging to 3224872
[2025-10-13 01:20:10] 2025-10-13 05:19:23,300 | INFO     | ready for new job
[2025-10-13 01:20:10] 2025-10-13 05:19:23,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:20:10] 2025-10-13 05:19:23,319 | INFO     | ***************************************
[2025-10-13 01:20:10] 2025-10-13 05:19:23,319 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:20:10] 2025-10-13 05:19:23,319 | INFO     | ***************************************
[2025-10-13 01:20:10] 2025-10-13 05:19:23,320 | INFO     | 
[2025-10-13 01:20:10] 2025-10-13 05:19:23,355 | INFO     | architecture information:
[2025-10-13 01:20:10] 2025-10-13 05:19:23,372 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:20:10] 2025-10-13 05:19:23,529 | INFO     | cat /etc/os-release:
[2025-10-13 01:20:10] NAME="CentOS Linux"
[2025-10-13 01:20:10] VERSION="7 (Core)"
[2025-10-13 01:20:10] ID="centos"
[2025-10-13 01:20:10] ID_LIKE="rhel fedora"
[2025-10-13 01:20:10] VERSION_ID="7"
[2025-10-13 01:20:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:20:10] ANSI_COLOR="0;31"
[2025-10-13 01:20:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:20:10] HOME_URL="https://www.centos.org/"
[2025-10-13 01:20:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:20:10] 
[2025-10-13 01:20:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:20:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:20:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:20:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:20:10] 
[2025-10-13 01:20:10] 2025-10-13 05:19:23,530 | INFO     | ***************************************
[2025-10-13 01:20:10] 2025-10-13 05:19:24,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 01:20:10] 2025-10-13 05:19:24,208 | INFO     | sufficient remaining disk space (92542074880 B)
[2025-10-13 01:20:10] 2025-10-13 05:19:24,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:20:10] 2025-10-13 05:19:24,209 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:20:10] 2025-10-13 05:19:24,209 | INFO     | update_server=False
[2025-10-13 01:20:10] 2025-10-13 05:19:24,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:20:10] 2025-10-13 05:19:24,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:20:10] 2025-10-13 05:19:24,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:20:10] 2025-10-13 05:19:24,254 | INFO     | aborting loop
[2025-10-13 01:20:10] 2025-10-13 05:19:24,376 | INFO     | all payload control threads have been joined
[2025-10-13 01:20:10] 2025-10-13 05:19:24,985 | INFO     | all data control threads have been joined
[2025-10-13 01:20:10] 2025-10-13 05:19:25,215 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,260 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,284 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,355 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,382 | INFO     | [payload] control thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,387 | INFO     | all job control threads have been joined
[2025-10-13 01:20:10] 2025-10-13 05:19:25,388 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,548 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:20:10] 2025-10-13 05:19:25,758 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:25,991 | INFO     | [data] control thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:26,224 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:26,257 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:26,410 | INFO     | [job] control thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:26,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:26,673 | INFO     | [job] validate thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:26,755 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:27,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:20:10] 2025-10-13 05:19:31,430 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:20:10] 2025-10-13 05:19:52,006 | INFO     | PID=3207998 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:20:10] 2025-10-13 05:19:52,007 | INFO     | .. there are 39 such processes running
[2025-10-13 01:20:10] 2025-10-13 05:19:52,007 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:20:10] 2025-10-13 05:19:52,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:20:10] 2025-10-13 05:19:52,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:20:10] 2025-10-13 05:20:02,248 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:20:10] 2025-10-13 05:20:03,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139769329289024)>', '<ExcThread(monitor, started 139768704792320)>']
[2025-10-13 01:20:10] 2025-10-13 05:20:03,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:20:10] 2025-10-13 05:20:03,074 | INFO     | [monitor] control thread has ended
[2025-10-13 01:20:10] 2025-10-13 05:20:08,054 | INFO     | all workflow threads have been joined
[2025-10-13 01:20:10] 2025-10-13 05:20:08,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:20:10] 2025-10-13 05:20:08,055 | INFO     | traces error code: 0
[2025-10-13 01:20:10] 2025-10-13 05:20:08,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:20:10] 2025-10-13 05:20:09,087 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:20:10] 2025-10-13 05:20:09,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:20:10] 2025-10-13 05:20:09,174 [wrapper] pilotpid: 3207998
[2025-10-13 01:20:10] 2025-10-13 05:20:09,189 [wrapper] Pilot exit status: 0
[2025-10-13 01:20:10] 2025-10-13 05:20:09,305 [wrapper] pandaids: 6840223815
[2025-10-13 01:20:10] 2025-10-13 05:20:09,741 [wrapper] cleanup supervisor_pilot  862617 3207999
[2025-10-13 01:20:10] 2025-10-13 05:20:09,750 [wrapper] Test setup, not cleaning
[2025-10-13 01:20:10] 2025-10-13 05:20:09,754 [wrapper] apfmon messages muted
[2025-10-13 01:20:10] 2025-10-13 05:20:09,759 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:20:10] 2025-10-13 05:20:09,768 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:20:10]  *** Error codes and diagnostics ***
[2025-10-13 01:20:10]     "exeErrorCode": 0,
[2025-10-13 01:20:10]     "exeErrorDiag": "",
[2025-10-13 01:20:10]     "pilotErrorCode": 0,
[2025-10-13 01:20:10]     "pilotErrorDiag": "",
[2025-10-13 01:20:10]  *** Listing of results directory ***
[2025-10-13 01:20:10] total 421596
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:12 queuedata.json
[2025-10-13 01:20:10] -rwx------. 1 boincer umatlas     36292 Oct 12 11:12 runpilot2-wrapper.sh
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas       100 Oct 12 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:20:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 17:01 run_atlas
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas       105 Oct 12 17:01 job.xml
[2025-10-13 01:20:10] -rw-r--r--. 2 boincer umatlas 222118867 Oct 12 17:01 EVNT.46676267._004559.pool.root.1
[2025-10-13 01:20:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 17:01 shared
[2025-10-13 01:20:10] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 17:01 input.tar.gz
[2025-10-13 01:20:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:01 start_atlas.sh
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas         0 Oct 12 17:01 boinc_lockfile
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:01 pandaJob.out
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas    975536 Oct 12 17:03 agis_schedconf.cvmfs.json
[2025-10-13 01:20:10] drwx------. 5 boincer umatlas      4096 Oct 12 17:03 pilot3
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas      6861 Oct 13 01:12 init_data.xml
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas 197906219 Oct 13 01:14 HITS.46676269._081919.pool.root.1
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas       531 Oct 13 01:14 boinc_task_state.xml
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas      1057 Oct 13 01:18 memory_monitor_summary.json
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas   1560580 Oct 13 01:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas    632887 Oct 13 01:18 log.46676269._081919.job.log.tgz.1
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas        95 Oct 13 01:18 pilot_heartbeat.json
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas      7849 Oct 13 01:19 heartbeat.json
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:20 boinc_mmap_file
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas        28 Oct 13 01:20 wrapper_checkpoint.txt
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas      4824 Oct 13 01:20 pilotlog.txt
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas   3259928 Oct 13 01:20 log.46676269._081919.job.log.1
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas       357 Oct 13 01:20 output.list
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:20 runtime_log
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas   3911680 Oct 13 01:20 result.tar.gz
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas       664 Oct 13 01:20 wYYLDmUvCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnPkNDmnNavEm.diag
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 01:20 runtime_log.err
[2025-10-13 01:20:10] -rw-r--r--. 1 boincer umatlas     21033 Oct 13 01:20 stderr.txt
[2025-10-13 01:20:10] HITS file was successfully produced:
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas 197906219 Oct 13 01:14 shared/HITS.pool.root.1
[2025-10-13 01:20:10]  *** Contents of shared directory: ***
[2025-10-13 01:20:10] total 414588
[2025-10-13 01:20:10] -rw-r--r--. 2 boincer umatlas 222118867 Oct 12 17:01 ATLAS.root_0
[2025-10-13 01:20:10] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 17:01 input.tar.gz
[2025-10-13 01:20:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 17:01 start_atlas.sh
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas 197906219 Oct 13 01:14 HITS.pool.root.1
[2025-10-13 01:20:10] -rw-------. 1 boincer umatlas   3911680 Oct 13 01:20 result.tar.gz
01:20:12 (3199394): run_atlas exited; CPU time 57321.580393
01:20:12 (3199394): called boinc_finish(0)

</stderr_txt>
]]>

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