Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:37:00 (3315213): wrapper (7.7.26015): starting
03:37:00 (3315213): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:37:00] Arguments: --nthreads 3
[2025-10-13 03:37:00] Threads: 3
[2025-10-13 03:37:00] Checking for CVMFS
[2025-10-13 03:37:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:37:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:37:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:37:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:37:00] 2.9.2.0 1827752 4983 85100 151643 0 57 29486342 36864000 0 130560 0 3875053 99.991 175922 692 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:37:00] CVMFS is ok
[2025-10-13 03:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:37:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:37:00] Further information can be found at the LHC@home message board.
[2025-10-13 03:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:37:00] Checking for apptainer binary...
[2025-10-13 03:37:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:37:00] Running /usr/bin/apptainer --version
[2025-10-13 03:37:00] apptainer version 1.4.1-1.1
[2025-10-13 03:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:37:00] thA305b
[2025-10-13 03:37:00] apptainer works
[2025-10-13 03:37:00] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:37:00] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:37:00] Starting ATLAS job with PandaID=6839865942
[2025-10-13 03:37:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:00:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:00:17] 2025-10-13 02:59:27,089 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,089 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,114 | INFO     | [data] control thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,269 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,348 | INFO     | all job control threads have been joined
[2025-10-13 05:00:17] 2025-10-13 02:59:27,355 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,372 | INFO     | [payload] control thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,848 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:27,924 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:28,135 | INFO     | [job] validate thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:28,250 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:28,331 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:28,339 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:28,354 | INFO     | [job] control thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:28,748 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:30,091 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:36,597 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:00:17] 2025-10-13 02:59:37,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:00:17] 2025-10-13 02:59:56,616 | INFO     | PID=3318937 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:00:17] 2025-10-13 02:59:56,617 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:00:17] 2025-10-13 02:59:56,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:00:17] 2025-10-13 02:59:56,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:00:17] 2025-10-13 03:00:11,899 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:00:17] 2025-10-13 03:00:12,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709848700736)>', '<ExcThread(monitor, started 139709363771136)>']
[2025-10-13 05:00:17] 2025-10-13 03:00:12,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:00:17] 2025-10-13 03:00:12,701 | INFO     | [monitor] control thread has ended
[2025-10-13 05:00:17] 2025-10-13 03:00:17,080 | INFO     | all workflow threads have been joined
[2025-10-13 05:00:17] 2025-10-13 03:00:17,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:00:17] 2025-10-13 03:00:17,081 | INFO     | traces error code: 0
[2025-10-13 05:00:17] 2025-10-13 03:00:17,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:00:17] 2025-10-13 03:00:17,134 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:00:17] 2025-10-13 03:00:17,137 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:00:17] 2025-10-13 03:00:17,139 [wrapper] pilotpid: 3318937
[2025-10-13 05:00:17] 2025-10-13 03:00:17,142 [wrapper] Pilot exit status: 0
[2025-10-13 05:00:17] 2025-10-13 03:00:17,150 [wrapper] pandaids: 6839865942
[2025-10-13 05:00:17] 2025-10-13 03:00:17,169 [wrapper] cleanup supervisor_pilot 3337775 3318938
[2025-10-13 05:00:17] 2025-10-13 03:00:17,171 [wrapper] Test setup, not cleaning
[2025-10-13 05:00:17] 2025-10-13 03:00:17,174 [wrapper] apfmon messages muted
[2025-10-13 05:00:17] 2025-10-13 03:00:17,176 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:00:17] 2025-10-13 03:00:17,179 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:00:17]  *** Error codes and diagnostics ***
[2025-10-13 05:00:17]     "exeErrorCode": 0,
[2025-10-13 05:00:17]     "exeErrorDiag": "",
[2025-10-13 05:00:17]     "pilotErrorCode": 0,
[2025-10-13 05:00:17]     "pilotErrorDiag": "",
[2025-10-13 05:00:17]  *** Listing of results directory ***
[2025-10-13 05:00:17] total 405032
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-13 05:00:17] -rwx------ 1 boinc boinc     36292 Oct 12 12:02 runpilot2-wrapper.sh
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:02 queuedata.json
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:00:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:37 run_atlas
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:37 job.xml
[2025-10-13 05:00:17] -rw-r--r-- 2 boinc boinc 221468151 Oct 13 03:37 EVNT.46676267._003601.pool.root.1
[2025-10-13 05:00:17] -rw-r--r-- 2 boinc boinc    569674 Oct 13 03:37 input.tar.gz
[2025-10-13 05:00:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:37 start_atlas.sh
[2025-10-13 05:00:17] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:37 shared
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:37 boinc_setup_complete
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc      6447 Oct 13 03:37 init_data.xml
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:37 boinc_lockfile
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:37 pandaJob.out
[2025-10-13 05:00:17] -rw------- 1 boinc boinc    975595 Oct 13 03:37 agis_schedconf.cvmfs.json
[2025-10-13 05:00:17] -rw------- 1 boinc boinc   1560580 Oct 13 03:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:00:17] drwx------ 5 boinc boinc      4096 Oct 13 03:37 pilot3
[2025-10-13 05:00:17] -rw------- 1 boinc boinc 187442547 Oct 13 04:59 HITS.46676269._075677.pool.root.1
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc       530 Oct 13 04:59 boinc_task_state.xml
[2025-10-13 05:00:17] -rw------- 1 boinc boinc      1016 Oct 13 04:59 memory_monitor_summary.json
[2025-10-13 05:00:17] -rw------- 1 boinc boinc    250632 Oct 13 04:59 log.46676269._075677.job.log.tgz.1
[2025-10-13 05:00:17] -rw------- 1 boinc boinc      7757 Oct 13 04:59 heartbeat.json
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:59 boinc_mmap_file
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:59 wrapper_checkpoint.txt
[2025-10-13 05:00:17] -rw------- 1 boinc boinc        95 Oct 13 04:59 pilot_heartbeat.json
[2025-10-13 05:00:17] -rw------- 1 boinc boinc      5010 Oct 13 05:00 pilotlog.txt
[2025-10-13 05:00:17] -rw------- 1 boinc boinc    724955 Oct 13 05:00 log.46676269._075677.job.log.1
[2025-10-13 05:00:17] -rw------- 1 boinc boinc       357 Oct 13 05:00 output.list
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:00 runtime_log
[2025-10-13 05:00:17] -rw------- 1 boinc boinc    993280 Oct 13 05:00 result.tar.gz
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc      8782 Oct 13 05:00 runtime_log.err
[2025-10-13 05:00:17] -rw------- 1 boinc boinc       659 Oct 13 05:00 464LDmh57R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8OjNDmUC0Phn.diag
[2025-10-13 05:00:17] -rw-r--r-- 1 boinc boinc      6493 Oct 13 05:00 stderr.txt
[2025-10-13 05:00:17] HITS file was successfully produced:
[2025-10-13 05:00:17] -rw------- 1 boinc boinc 187442547 Oct 13 04:59 shared/HITS.pool.root.1
[2025-10-13 05:00:17]  *** Contents of shared directory: ***
[2025-10-13 05:00:17] total 400888
[2025-10-13 05:00:17] -rw-r--r-- 2 boinc boinc 221468151 Oct 13 03:37 ATLAS.root_0
[2025-10-13 05:00:17] -rw-r--r-- 2 boinc boinc    569674 Oct 13 03:37 input.tar.gz
[2025-10-13 05:00:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:37 start_atlas.sh
[2025-10-13 05:00:17] -rw------- 1 boinc boinc 187442547 Oct 13 04:59 HITS.pool.root.1
[2025-10-13 05:00:17] -rw------- 1 boinc boinc    993280 Oct 13 05:00 result.tar.gz
05:00:18 (3315213): run_atlas exited; CPU time 14212.436595
05:00:18 (3315213): called boinc_finish(0)

</stderr_txt>
]]>

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