Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:45:19 (3646830): wrapper (7.7.26015): starting
12:45:19 (3646830): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:45:19] Arguments: --nthreads 8
[2025-10-12 12:45:19] Threads: 8
[2025-10-12 12:45:19] Checking for CVMFS
[2025-10-12 12:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:45:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:45:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:45:21] 2.13.1.0 7481 77595 102392 151627 2 273 34241961 40960001 25913 16776704 0 447364403 99.779 253545521 45794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:45:21] CVMFS is ok
[2025-10-12 12:45:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:45:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:45:21] Further information can be found at the LHC@home message board.
[2025-10-12 12:45:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:45:21] Checking for apptainer binary...
[2025-10-12 12:45:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:45:21] Running /usr/bin/apptainer --version
[2025-10-12 12:45:21] apptainer version 1.4.3-1.el9
[2025-10-12 12:45:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:45:21] c-208-38.aglt2.org
[2025-10-12 12:45:21] apptainer works
[2025-10-12 12:45:21] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:45:21] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:45:21] Starting ATLAS job with PandaID=6840223675
[2025-10-12 12:45:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:16:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:16:24] 2025-10-12 18:15:37,865 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:16:24] 2025-10-12 18:15:37,865 | INFO     | summary of transferred files:
[2025-10-12 14:16:24] 2025-10-12 18:15:37,865 | INFO     |  -- lfn=log.46676269._081779.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:16:24] 2025-10-12 18:15:37,865 | INFO     | stage-out finished correctly
[2025-10-12 14:16:24] 2025-10-12 18:15:37,944 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:16:24] 2025-10-12 18:15:38,087 | INFO     | number of running child processes to parent process 3665190: 1
[2025-10-12 14:16:24] 2025-10-12 18:15:38,087 | INFO     | maximum number of monitored processes: 6
[2025-10-12 14:16:24] 2025-10-12 18:15:38,179 | INFO     | job 6840223675 has state=finished
[2025-10-12 14:16:24] 2025-10-12 18:15:38,180 | INFO     | preparing for final server update for job 6840223675 in state='finished'
[2025-10-12 14:16:24] 2025-10-12 18:15:38,180 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:16:24] 2025-10-12 18:15:38,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:16:24] 2025-10-12 18:15:38,180 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:16:24] 2025-10-12 18:15:38,180 | INFO     | job 6840223675 has finished - writing final server update
[2025-10-12 14:16:24] 2025-10-12 18:15:38,180 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:16:24] 2025-10-12 18:15:38,232 | INFO     | executing command: lscpu
[2025-10-12 14:16:24] 2025-10-12 18:15:38,323 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:16:24] 2025-10-12 18:15:38,408 | INFO     | PID=3653082 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 14:16:24] 2025-10-12 18:15:38,408 | INFO     | .. there are 22 such processes running
[2025-10-12 14:16:24] 2025-10-12 18:15:39,410 | INFO     | time since job start (5381s) is within the limit (172800.0s)
[2025-10-12 14:16:24] 2025-10-12 18:15:40,608 | INFO     | monitor loop #352: job 0:6840223675 is in state 'finished'
[2025-10-12 14:16:24] 2025-10-12 18:15:40,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:16:24] 2025-10-12 18:15:41,418 | INFO     | time since job start (5383s) is within the limit (172800.0s)
[2025-10-12 14:16:24] 2025-10-12 18:15:43,112 | INFO     | monitor loop #353: job 0:6840223675 is in state 'finished'
[2025-10-12 14:16:24] 2025-10-12 18:15:43,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:16:24] 2025-10-12 18:15:43,425 | INFO     | time since job start (5385s) is within the limit (172800.0s)
[2025-10-12 14:16:24] 2025-10-12 18:15:45,431 | INFO     | time since job start (5387s) is within the limit (172800.0s)
[2025-10-12 14:16:24] 2025-10-12 18:15:45,616 | INFO     | monitor loop #354: job 0:6840223675 is in state 'finished'
[2025-10-12 14:16:24] 2025-10-12 18:15:45,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:16:24] 2025-10-12 18:15:47,439 | INFO     | time since job start (5389s) is within the limit (172800.0s)
[2025-10-12 14:16:24] 2025-10-12 18:15:48,121 | INFO     | monitor loop #355: job 0:6840223675 is in state 'finished'
[2025-10-12 14:16:24] 2025-10-12 18:15:48,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:16:24] 2025-10-12 18:15:49,446 | INFO     | time since job start (5391s) is within the limit (172800.0s)
[2025-10-12 14:16:24] 2025-10-12 18:15:50,626 | INFO     | monitor loop #356: job 0:6840223675 is in state 'finished'
[2025-10-12 14:16:24] 2025-10-12 18:15:50,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:16:24] 2025-10-12 18:15:50,897 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:16:24] 2025-10-12 18:15:50,903 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3748.9915859375005
[2025-10-12 14:16:24] 2025-10-12 18:15:50,916 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840223675/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:16:24] 2025-10-12 18:15:50,916 | INFO     | extracted standard info from prmon json
[2025-10-12 14:16:24] 2025-10-12 18:15:50,916 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:16:24] 2025-10-12 18:15:50,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:16:24] 2025-10-12 18:15:50,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:16:24] 2025-10-12 18:15:50,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:16:24] 2025-10-12 18:15:50,918 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:16:24] 2025-10-12 18:15:50,918 | INFO     | sum of square deviations: 158732371.94999978
[2025-10-12 14:16:24] 2025-10-12 18:15:50,918 | INFO     | sum of deviations: -3914785903.575001
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | mean x: 1760290345.525
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | mean y: 2523088.0375
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | -- intersect: 43416224692.84394
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | intersect: 43416224692.84394
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | chi2: 0.013706202855044555
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | -- intersect: 43416224692.84394
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | current memory leak: -24.66 B/s (using 80 data points, chi2=0.01)
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | could have reported an average CPU frequency of 3741 MHz (6 samples)
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | ..............................
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | . Timing measurements:
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | . get job = 0 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | . initial setup = 2 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | . payload setup = 19 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | . stage-in = 0 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,919 | INFO     | . payload execution = 5312 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,920 | INFO     | . stage-out = 1 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,920 | INFO     | . log creation = 0 s
[2025-10-12 14:16:24] 2025-10-12 18:15:50,920 | INFO     | ..............................
[2025-10-12 14:16:24] 2025-10-12 18:15:51,001 | INFO     | 
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | job summary report
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | --------------------------------------------------
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | PanDA job id: 6840223675
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | task id: 46676269
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | errors: (none)
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | pilot state: finished 
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | transexitcode: 0
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | exeerrorcode: 0
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | exeerrordiag: 
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | exitcode: 0
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | exitmsg: OK
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | cpuconsumptiontime: 25076 s
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | nevents: 400
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | neventsw: 0
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | pid: 3665190
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | pgrp: 3665190
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | corecount: 8
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | event service: False
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | sizes: {0: 2348857, 11: 2348857, 19: 2349147, 21: 2349175, 5335: 2375886, 5338: 2385068, 5351: 2385206}
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | --------------------------------------------------
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | 
[2025-10-12 14:16:24] 2025-10-12 18:15:51,002 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | job 6840223675 has completed (purged errors)
[2025-10-12 14:16:24] 2025-10-12 18:15:51,077 | INFO     | overall cleanup function is called
[2025-10-12 14:16:24] 2025-10-12 18:15:52,084 | INFO     | --- collectZombieJob: --- 10, [3665190]
[2025-10-12 14:16:24] 2025-10-12 18:15:52,085 | INFO     | zombie collector waiting for pid 3665190
[2025-10-12 14:16:24] 2025-10-12 18:15:52,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:16:24] 2025-10-12 18:15:52,085 | INFO     | collected zombie processes
[2025-10-12 14:16:24] 2025-10-12 18:15:52,085 | INFO     | will attempt to kill all subprocesses of pid=3665190
[2025-10-12 14:16:24] 2025-10-12 18:15:52,701 | INFO     | process IDs to be killed: [3665190] (in reverse order)
[2025-10-12 14:16:24] 2025-10-12 18:15:52,825 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:16:24] 2025-10-12 18:15:52,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:16:24] 2025-10-12 18:15:52,845 | INFO     | did not find any defunct processes belonging to 3665190
[2025-10-12 14:16:24] 2025-10-12 18:15:52,865 | INFO     | did not find any defunct processes belonging to 3665190
[2025-10-12 14:16:24] 2025-10-12 18:15:52,865 | INFO     | ready for new job
[2025-10-12 14:16:24] 2025-10-12 18:15:52,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:16:24] 2025-10-12 18:15:52,867 | INFO     | ***************************************
[2025-10-12 14:16:24] 2025-10-12 18:15:52,867 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:16:24] 2025-10-12 18:15:52,867 | INFO     | ***************************************
[2025-10-12 14:16:24] 2025-10-12 18:15:52,867 | INFO     | 
[2025-10-12 14:16:24] 2025-10-12 18:15:52,872 | INFO     | architecture information:
[2025-10-12 14:16:24] 2025-10-12 18:15:52,872 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:16:24] 2025-10-12 18:15:52,889 | INFO     | cat /etc/os-release:
[2025-10-12 14:16:24] NAME="CentOS Linux"
[2025-10-12 14:16:24] VERSION="7 (Core)"
[2025-10-12 14:16:24] ID="centos"
[2025-10-12 14:16:24] ID_LIKE="rhel fedora"
[2025-10-12 14:16:24] VERSION_ID="7"
[2025-10-12 14:16:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:16:24] ANSI_COLOR="0;31"
[2025-10-12 14:16:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:16:24] HOME_URL="https://www.centos.org/"
[2025-10-12 14:16:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:16:24] 
[2025-10-12 14:16:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:16:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:16:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:16:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:16:24] 
[2025-10-12 14:16:24] 2025-10-12 18:15:52,889 | INFO     | ***************************************
[2025-10-12 14:16:24] 2025-10-12 18:15:53,392 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 14:16:24] 2025-10-12 18:15:53,459 | INFO     | sufficient remaining disk space (170756407296 B)
[2025-10-12 14:16:24] 2025-10-12 18:15:53,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:16:24] 2025-10-12 18:15:53,459 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:16:24] 2025-10-12 18:15:53,459 | INFO     | update_server=False
[2025-10-12 14:16:24] 2025-10-12 18:15:53,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:16:24] 2025-10-12 18:15:53,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:16:24] 2025-10-12 18:15:53,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:16:24] 2025-10-12 18:15:53,532 | INFO     | all data control threads have been joined
[2025-10-12 14:16:24] 2025-10-12 18:15:53,622 | INFO     | all job control threads have been joined
[2025-10-12 14:16:24] 2025-10-12 18:15:53,820 | INFO     | all payload control threads have been joined
[2025-10-12 14:16:24] 2025-10-12 18:15:54,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:16:24] 2025-10-12 18:15:54,137 | INFO     | aborting loop
[2025-10-12 14:16:24] 2025-10-12 18:15:54,464 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:54,523 | INFO     | [job] validate thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:54,537 | INFO     | [data] control thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:54,588 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:54,628 | INFO     | [job] control thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:54,788 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:54,826 | INFO     | [payload] control thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:55,127 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-12 14:16:24] 2025-10-12 18:15:55,142 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:55,260 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:55,472 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:55,506 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:55,638 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:55,718 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:56,013 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:16:24] 2025-10-12 18:15:57,019 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:15:57,468 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:16:04,473 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:16:24] 2025-10-12 18:16:05,479 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:16:24] 2025-10-12 18:16:06,799 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:16:24] 2025-10-12 18:16:07,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459976406848)>', '<ExcThread(monitor, started 140459607299840)>']
[2025-10-12 14:16:24] 2025-10-12 18:16:12,874 | INFO     | all workflow threads have been joined
[2025-10-12 14:16:24] 2025-10-12 18:16:12,875 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:16:24] 2025-10-12 18:16:12,875 | INFO     | traces error code: 0
[2025-10-12 14:16:24] 2025-10-12 18:16:12,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:16:24] 2025-10-12 18:16:22,963 | INFO     | PID=3653082 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:16:24] 2025-10-12 18:16:22,963 | INFO     | .. there are 22 such processes running
[2025-10-12 14:16:24] 2025-10-12 18:16:22,963 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:16:24] 2025-10-12 18:16:22,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:16:24] 2025-10-12 18:16:22,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:16:24] 2025-10-12 18:16:22,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:16:24] 2025-10-12 18:16:22,964 | INFO     | [monitor] control thread has ended
[2025-10-12 14:16:24] 2025-10-12 18:16:23,335 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:16:24] 2025-10-12 18:16:23,353 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:16:24] 2025-10-12 18:16:23,374 [wrapper] pilotpid: 3653082
[2025-10-12 14:16:24] 2025-10-12 18:16:23,396 [wrapper] Pilot exit status: 0
[2025-10-12 14:16:24] 2025-10-12 18:16:23,495 [wrapper] pandaids: 6840223675
[2025-10-12 14:16:24] 2025-10-12 18:16:23,606 [wrapper] cleanup supervisor_pilot 3989284 3653083
[2025-10-12 14:16:24] 2025-10-12 18:16:23,622 [wrapper] Test setup, not cleaning
[2025-10-12 14:16:24] 2025-10-12 18:16:23,636 [wrapper] apfmon messages muted
[2025-10-12 14:16:24] 2025-10-12 18:16:23,655 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:16:24] 2025-10-12 18:16:23,679 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:16:24]  *** Error codes and diagnostics ***
[2025-10-12 14:16:24]     "exeErrorCode": 0,
[2025-10-12 14:16:24]     "exeErrorDiag": "",
[2025-10-12 14:16:24]     "pilotErrorCode": 0,
[2025-10-12 14:16:24]     "pilotErrorDiag": "",
[2025-10-12 14:16:24]  *** Listing of results directory ***
[2025-10-12 14:16:24] total 411700
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:09 queuedata.json
[2025-10-12 14:16:24] -rwx------. 1 boincer umatlas     36292 Oct 12 11:10 runpilot2-wrapper.sh
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:16:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:45 run_atlas
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:45 job.xml
[2025-10-12 14:16:24] -rw-r--r--. 2 boincer umatlas 220019896 Oct 12 12:45 EVNT.46676267._004553.pool.root.1
[2025-10-12 14:16:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:45 start_atlas.sh
[2025-10-12 14:16:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:45 shared
[2025-10-12 14:16:24] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 12:45 input.tar.gz
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:45 boinc_lockfile
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:45 pandaJob.out
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas    975528 Oct 12 12:45 agis_schedconf.cvmfs.json
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:16:24] drwx------. 5 boincer umatlas      4096 Oct 12 12:45 pilot3
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 14:10 init_data.xml
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas 195526438 Oct 12 14:14 HITS.46676269._081779.pool.root.1
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas       529 Oct 12 14:14 boinc_task_state.xml
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas        95 Oct 12 14:15 pilot_heartbeat.json
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas      1048 Oct 12 14:15 memory_monitor_summary.json
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas    339996 Oct 12 14:15 log.46676269._081779.job.log.tgz.1
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas      7807 Oct 12 14:15 heartbeat.json
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas        27 Oct 12 14:16 wrapper_checkpoint.txt
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:16 boinc_mmap_file
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas       823 Oct 12 14:16 pilotlog.txt
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas    731013 Oct 12 14:16 log.46676269._081779.job.log.1
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas       357 Oct 12 14:16 output.list
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:16 runtime_log
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas   1085440 Oct 12 14:16 result.tar.gz
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 14:16 runtime_log.err
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas       657 Oct 12 14:16 Q9oKDmxtCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsOkNDmjaaHKo.diag
[2025-10-12 14:16:24] -rw-r--r--. 1 boincer umatlas     22187 Oct 12 14:16 stderr.txt
[2025-10-12 14:16:24] HITS file was successfully produced:
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas 195526438 Oct 12 14:14 shared/HITS.pool.root.1
[2025-10-12 14:16:24]  *** Contents of shared directory: ***
[2025-10-12 14:16:24] total 407448
[2025-10-12 14:16:24] -rw-r--r--. 2 boincer umatlas 220019896 Oct 12 12:45 ATLAS.root_0
[2025-10-12 14:16:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:45 start_atlas.sh
[2025-10-12 14:16:24] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 12:45 input.tar.gz
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas 195526438 Oct 12 14:14 HITS.pool.root.1
[2025-10-12 14:16:24] -rw-------. 1 boincer umatlas   1085440 Oct 12 14:16 result.tar.gz
14:16:25 (3646830): run_atlas exited; CPU time 25218.175476
14:16:25 (3646830): called boinc_finish(0)

</stderr_txt>
]]>

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