Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:46:58 (79424): wrapper (7.7.26015): starting
15:46:58 (79424): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:46:58] Arguments: --nthreads 8
[2025-10-12 15:46:58] Threads: 8
[2025-10-12 15:46:58] Checking for CVMFS
[2025-10-12 15:46:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:46:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:46:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:47:00] 2.13.2.0 3214202 129699 747656 151635 3 204 15015741 25181185 23226 16776704 0 108356222 99.547 122454344 22779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:47:00] CVMFS is ok
[2025-10-12 15:47:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:47:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:47:00] Further information can be found at the LHC@home message board.
[2025-10-12 15:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:47:00] Checking for apptainer binary...
[2025-10-12 15:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:47:00] Running /usr/bin/apptainer --version
[2025-10-12 15:47:00] apptainer version 1.4.3-1.el9
[2025-10-12 15:47:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:47:00] c-16-37.aglt2.org
[2025-10-12 15:47:00] apptainer works
[2025-10-12 15:47:00] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:47:00] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:47:01] Starting ATLAS job with PandaID=6840223667
[2025-10-12 15:47:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:03:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:03:31] 2025-10-13 03:02:41,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,529 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:03:31] 2025-10-13 03:02:41,548 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2811.0512916666667
[2025-10-12 23:03:31] 2025-10-13 03:02:41,590 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840223667/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,591 | INFO     | extracted standard info from prmon json
[2025-10-12 23:03:31] 2025-10-13 03:02:41,591 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:03:31] 2025-10-13 03:02:41,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:03:31] 2025-10-13 03:02:41,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:03:31] 2025-10-13 03:02:41,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:03:31] 2025-10-13 03:02:41,602 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:03:31] 2025-10-13 03:02:41,603 | INFO     | sum of square deviations: 24140164978.112324
[2025-10-12 23:03:31] 2025-10-13 03:02:41,608 | INFO     | sum of deviations: -100728307852.99065
[2025-10-12 23:03:31] 2025-10-13 03:02:41,608 | INFO     | mean x: 1760311528.4613583
[2025-10-12 23:03:31] 2025-10-13 03:02:41,609 | INFO     | mean y: 2071273.1217798595
[2025-10-12 23:03:31] 2025-10-13 03:02:41,609 | INFO     | -- intersect: 7347224121.77847
[2025-10-12 23:03:31] 2025-10-13 03:02:41,609 | INFO     | intersect: 7347224121.77847
[2025-10-12 23:03:31] 2025-10-13 03:02:41,610 | INFO     | chi2: 3.0316788749889954
[2025-10-12 23:03:31] 2025-10-13 03:02:41,611 | INFO     | sum of square deviations: 23302060509.53557
[2025-10-12 23:03:31] 2025-10-13 03:02:41,616 | INFO     | sum of deviations: -59975038248.43128
[2025-10-12 23:03:31] 2025-10-13 03:02:41,616 | INFO     | mean x: 1760311375.9668245
[2025-10-12 23:03:31] 2025-10-13 03:02:41,616 | INFO     | mean y: 2078658.4691943128
[2025-10-12 23:03:31] 2025-10-13 03:02:41,616 | INFO     | -- intersect: 4532782801.974279
[2025-10-12 23:03:31] 2025-10-13 03:02:41,616 | INFO     | intersect: 4532782801.974279
[2025-10-12 23:03:31] 2025-10-13 03:02:41,617 | INFO     | chi2: 2.2891430655152116
[2025-10-12 23:03:31] 2025-10-13 03:02:41,617 | INFO     | current chi2=2.2891430655152116 (change=24.492561385693566 %)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,618 | INFO     | right removable region: 421
[2025-10-12 23:03:31] 2025-10-13 03:02:41,619 | INFO     | sum of square deviations: 23301940339.535557
[2025-10-12 23:03:31] 2025-10-13 03:02:41,623 | INFO     | sum of deviations: -155827743141.75833
[2025-10-12 23:03:31] 2025-10-13 03:02:41,624 | INFO     | mean x: 1760311680.9668245
[2025-10-12 23:03:31] 2025-10-13 03:02:41,624 | INFO     | mean y: 2081251.874407583
[2025-10-12 23:03:31] 2025-10-13 03:02:41,624 | INFO     | -- intersect: 11773864737.463852
[2025-10-12 23:03:31] 2025-10-13 03:02:41,624 | INFO     | intersect: 11773864737.463852
[2025-10-12 23:03:31] 2025-10-13 03:02:41,625 | INFO     | chi2: 1.600847825484372
[2025-10-12 23:03:31] 2025-10-13 03:02:41,625 | INFO     | current chi2=1.600847825484372 (change=47.19599629462131 %)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,625 | INFO     | sum of square deviations: 22483369473.87523
[2025-10-12 23:03:31] 2025-10-13 03:02:41,660 | INFO     | time since job start (26108s) is within the limit (172800.0s)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,660 | INFO     | 26113s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 23:03:31] 2025-10-13 03:02:41,666 | INFO     | sum of deviations: -140437957558.16797
[2025-10-12 23:03:31] 2025-10-13 03:02:41,683 | INFO     | mean x: 1760311833.4700239
[2025-10-12 23:03:31] 2025-10-13 03:02:41,683 | INFO     | mean y: 2078377.7865707434
[2025-10-12 23:03:31] 2025-10-13 03:02:41,683 | INFO     | -- intersect: 10997520980.162405
[2025-10-12 23:03:31] 2025-10-13 03:02:41,683 | INFO     | intersect: 10997520980.162405
[2025-10-12 23:03:31] 2025-10-13 03:02:41,684 | INFO     | chi2: 1.561264715577312
[2025-10-12 23:03:31] 2025-10-13 03:02:41,684 | INFO     | current chi2=1.561264715577312 (change=2.4726341427913856 %)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,684 | INFO     | left removable region: 20
[2025-10-12 23:03:31] 2025-10-13 03:02:41,685 | INFO     | sum of square deviations: 19993324336.025063
[2025-10-12 23:03:31] 2025-10-13 03:02:41,695 | INFO     | sum of deviations: -50462233549.99498
[2025-10-12 23:03:31] 2025-10-13 03:02:41,695 | INFO     | mean x: 1760311955.4763093
[2025-10-12 23:03:31] 2025-10-13 03:02:41,695 | INFO     | mean y: 2076441.8952618453
[2025-10-12 23:03:31] 2025-10-13 03:02:41,696 | INFO     | -- intersect: 4445023073.738594
[2025-10-12 23:03:31] 2025-10-13 03:02:41,696 | INFO     | intersect: 4445023073.738594
[2025-10-12 23:03:31] 2025-10-13 03:02:41,696 | INFO     | chi2: 0.5439994211014646
[2025-10-12 23:03:31] 2025-10-13 03:02:41,697 | INFO     | -- intersect: 4445023073.738594
[2025-10-12 23:03:31] 2025-10-13 03:02:41,697 | INFO     | current memory leak: -2.52 B/s (using 401 data points, chi2=0.54)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,697 | INFO     | could have reported an average CPU frequency of 2805 MHz (18 samples)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,702 | INFO     | ..............................
[2025-10-12 23:03:31] 2025-10-13 03:02:41,702 | INFO     | . Timing measurements:
[2025-10-12 23:03:31] 2025-10-13 03:02:41,702 | INFO     | . get job = 0 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,702 | INFO     | . initial setup = 4 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,702 | INFO     | . payload setup = 22 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,702 | INFO     | . stage-in = 0 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,703 | INFO     | . payload execution = 26023 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,703 | INFO     | . stage-out = 4 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,703 | INFO     | . log creation = 0 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,703 | INFO     | ..............................
[2025-10-12 23:03:31] 2025-10-13 03:02:41,908 | INFO     | 
[2025-10-12 23:03:31] 2025-10-13 03:02:41,908 | INFO     | job summary report
[2025-10-12 23:03:31] 2025-10-13 03:02:41,908 | INFO     | --------------------------------------------------
[2025-10-12 23:03:31] 2025-10-13 03:02:41,908 | INFO     | PanDA job id: 6840223667
[2025-10-12 23:03:31] 2025-10-13 03:02:41,908 | INFO     | task id: 46676269
[2025-10-12 23:03:31] 2025-10-13 03:02:41,908 | INFO     | errors: (none)
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | pilot state: finished 
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | transexitcode: 0
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | exeerrorcode: 0
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | exeerrordiag: 
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | exitcode: 0
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | exitmsg: OK
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | cpuconsumptiontime: 51381 s
[2025-10-12 23:03:31] 2025-10-13 03:02:41,909 | INFO     | nevents: 400
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | neventsw: 0
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | pid: 91778
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | pgrp: 91778
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | corecount: 8
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | event service: False
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 17: 2349175, 23: 2349203, 26049: 2385236, 26055: 2394290, 26073: 2394428}
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | --------------------------------------------------
[2025-10-12 23:03:31] 2025-10-13 03:02:41,910 | INFO     | 
[2025-10-12 23:03:31] 2025-10-13 03:02:41,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:03:31] 2025-10-13 03:02:42,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,003 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:03:31] 2025-10-13 03:02:42,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:03:31] 2025-10-13 03:02:42,005 | INFO     | job 6840223667 has completed (purged errors)
[2025-10-12 23:03:31] 2025-10-13 03:02:42,005 | INFO     | overall cleanup function is called
[2025-10-12 23:03:31] 2025-10-13 03:02:43,022 | INFO     | --- collectZombieJob: --- 10, [91778]
[2025-10-12 23:03:31] 2025-10-13 03:02:43,022 | INFO     | zombie collector waiting for pid 91778
[2025-10-12 23:03:31] 2025-10-13 03:02:43,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:03:31] 2025-10-13 03:02:43,022 | INFO     | collected zombie processes
[2025-10-12 23:03:31] 2025-10-13 03:02:43,022 | INFO     | will attempt to kill all subprocesses of pid=91778
[2025-10-12 23:03:31] 2025-10-13 03:02:44,587 | INFO     | process IDs to be killed: [91778] (in reverse order)
[2025-10-12 23:03:31] 2025-10-13 03:02:45,009 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:03:31] 2025-10-13 03:02:45,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:03:31] 2025-10-13 03:02:45,053 | INFO     | did not find any defunct processes belonging to 91778
[2025-10-12 23:03:31] 2025-10-13 03:02:45,075 | INFO     | did not find any defunct processes belonging to 91778
[2025-10-12 23:03:31] 2025-10-13 03:02:45,076 | INFO     | ready for new job
[2025-10-12 23:03:31] 2025-10-13 03:02:45,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:03:31] 2025-10-13 03:02:45,079 | INFO     | ***************************************
[2025-10-12 23:03:31] 2025-10-13 03:02:45,080 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:03:31] 2025-10-13 03:02:45,080 | INFO     | ***************************************
[2025-10-12 23:03:31] 2025-10-13 03:02:45,080 | INFO     | 
[2025-10-12 23:03:31] 2025-10-13 03:02:45,109 | INFO     | architecture information:
[2025-10-12 23:03:31] 2025-10-13 03:02:45,133 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:03:31] 2025-10-13 03:02:45,186 | INFO     | cat /etc/os-release:
[2025-10-12 23:03:31] NAME="CentOS Linux"
[2025-10-12 23:03:31] VERSION="7 (Core)"
[2025-10-12 23:03:31] ID="centos"
[2025-10-12 23:03:31] ID_LIKE="rhel fedora"
[2025-10-12 23:03:31] VERSION_ID="7"
[2025-10-12 23:03:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:03:31] ANSI_COLOR="0;31"
[2025-10-12 23:03:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:03:31] HOME_URL="https://www.centos.org/"
[2025-10-12 23:03:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:03:31] 
[2025-10-12 23:03:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:03:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:03:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:03:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:03:31] 
[2025-10-12 23:03:31] 2025-10-13 03:02:45,186 | INFO     | ***************************************
[2025-10-12 23:03:31] 2025-10-13 03:02:45,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:03:31] 2025-10-13 03:02:45,732 | INFO     | sufficient remaining disk space (63706234880 B)
[2025-10-12 23:03:31] 2025-10-13 03:02:45,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:03:31] 2025-10-13 03:02:45,732 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:03:31] 2025-10-13 03:02:45,732 | INFO     | update_server=False
[2025-10-12 23:03:31] 2025-10-13 03:02:45,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:03:31] 2025-10-13 03:02:45,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:03:31] 2025-10-13 03:02:45,733 | INFO     | aborting loop
[2025-10-12 23:03:31] 2025-10-13 03:02:46,319 | INFO     | all data control threads have been joined
[2025-10-12 23:03:31] 2025-10-13 03:02:46,324 | INFO     | all payload control threads have been joined
[2025-10-12 23:03:31] 2025-10-13 03:02:46,425 | INFO     | all job control threads have been joined
[2025-10-12 23:03:31] 2025-10-13 03:02:46,742 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:46,743 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:46,781 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:46,781 | INFO     | [job] validate thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:46,781 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:46,781 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:46,952 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:03:31] 2025-10-13 03:02:47,067 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:47,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:03:31] 2025-10-13 03:02:47,325 | INFO     | [data] control thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:47,330 | INFO     | [payload] control thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:47,431 | INFO     | [job] control thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:47,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:47,846 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:47,959 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:48,114 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:48,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:03:31] 2025-10-13 03:02:49,221 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:02:52,912 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:03:31] 2025-10-13 03:03:16,400 | INFO     | PID=83250 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:03:31] 2025-10-13 03:03:16,400 | INFO     | .. there are 40 such processes running
[2025-10-12 23:03:31] 2025-10-13 03:03:16,401 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:03:31] 2025-10-13 03:03:16,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:03:31] 2025-10-13 03:03:16,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:03:31] 2025-10-13 03:03:23,537 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:03:31] 2025-10-13 03:03:24,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212612069184)>', '<ExcThread(monitor, started 140212109809408)>']
[2025-10-12 23:03:31] 2025-10-13 03:03:25,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:03:31] 2025-10-13 03:03:25,457 | INFO     | [monitor] control thread has ended
[2025-10-12 23:03:31] 2025-10-13 03:03:29,623 | INFO     | all workflow threads have been joined
[2025-10-12 23:03:31] 2025-10-13 03:03:29,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:03:31] 2025-10-13 03:03:29,623 | INFO     | traces error code: 0
[2025-10-12 23:03:31] 2025-10-13 03:03:29,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:03:31] 2025-10-13 03:03:30,063 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:03:31] 2025-10-13 03:03:30,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:03:31] 2025-10-13 03:03:30,069 [wrapper] pilotpid: 83250
[2025-10-12 23:03:31] 2025-10-13 03:03:30,071 [wrapper] Pilot exit status: 0
[2025-10-12 23:03:31] 2025-10-13 03:03:30,242 [wrapper] pandaids: 6840223667
[2025-10-12 23:03:31] 2025-10-13 03:03:30,601 [wrapper] cleanup supervisor_pilot 1753326 83251
[2025-10-12 23:03:31] 2025-10-13 03:03:30,662 [wrapper] Test setup, not cleaning
[2025-10-12 23:03:31] 2025-10-13 03:03:30,681 [wrapper] apfmon messages muted
[2025-10-12 23:03:31] 2025-10-13 03:03:30,700 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:03:31] 2025-10-13 03:03:30,726 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:03:31]  *** Error codes and diagnostics ***
[2025-10-12 23:03:31]     "exeErrorCode": 0,
[2025-10-12 23:03:31]     "exeErrorDiag": "",
[2025-10-12 23:03:31]     "pilotErrorCode": 0,
[2025-10-12 23:03:31]     "pilotErrorDiag": "",
[2025-10-12 23:03:31]  *** Listing of results directory ***
[2025-10-12 23:03:31] total 412492
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:09 queuedata.json
[2025-10-12 23:03:31] -rwx------. 1 boincer umatlas     36292 Oct 12 11:10 runpilot2-wrapper.sh
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:03:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:46 run_atlas
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:46 job.xml
[2025-10-12 23:03:31] -rw-r--r--. 2 boincer umatlas 220019896 Oct 12 15:46 EVNT.46676267._004553.pool.root.1
[2025-10-12 23:03:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:46 shared
[2025-10-12 23:03:31] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 15:46 input.tar.gz
[2025-10-12 23:03:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:46 start_atlas.sh
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:46 boinc_lockfile
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:47 pandaJob.out
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas    975536 Oct 12 15:47 agis_schedconf.cvmfs.json
[2025-10-12 23:03:31] drwx------. 5 boincer umatlas      4096 Oct 12 15:47 pilot3
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 23:01 init_data.xml
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas 191336776 Oct 12 23:01 HITS.46676269._081771.pool.root.1
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:01 boinc_task_state.xml
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas      1041 Oct 12 23:02 memory_monitor_summary.json
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas    587228 Oct 12 23:02 log.46676269._081771.job.log.tgz.1
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas        95 Oct 12 23:02 pilot_heartbeat.json
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas      7825 Oct 12 23:02 heartbeat.json
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas      4822 Oct 12 23:03 pilotlog.txt
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:03 boinc_mmap_file
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:03 wrapper_checkpoint.txt
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas   2980216 Oct 12 23:03 log.46676269._081771.job.log.1
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas       357 Oct 12 23:03 output.list
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:03 runtime_log
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas   3584000 Oct 12 23:03 result.tar.gz
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 23:03 runtime_log.err
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas       657 Oct 12 23:03 1MgKDmxtCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkOkNDmWzo5En.diag
[2025-10-12 23:03:31] -rw-r--r--. 1 boincer umatlas     20958 Oct 12 23:03 stderr.txt
[2025-10-12 23:03:31] HITS file was successfully produced:
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas 191336776 Oct 12 23:01 shared/HITS.pool.root.1
[2025-10-12 23:03:31]  *** Contents of shared directory: ***
[2025-10-12 23:03:31] total 405800
[2025-10-12 23:03:31] -rw-r--r--. 2 boincer umatlas 220019896 Oct 12 15:46 ATLAS.root_0
[2025-10-12 23:03:31] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 15:46 input.tar.gz
[2025-10-12 23:03:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:46 start_atlas.sh
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas 191336776 Oct 12 23:01 HITS.pool.root.1
[2025-10-12 23:03:31] -rw-------. 1 boincer umatlas   3584000 Oct 12 23:03 result.tar.gz
23:03:32 (79424): run_atlas exited; CPU time 52521.682630
23:03:32 (79424): called boinc_finish(0)

</stderr_txt>
]]>

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