Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:33:14 (28519): wrapper (7.7.26015): starting
12:33:14 (28519): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:33:14] Arguments: --nthreads 8
[2025-10-12 12:33:14] Threads: 8
[2025-10-12 12:33:14] Checking for CVMFS
[2025-10-12 12:33:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:33:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:33:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:33:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:33:14] 2.11.2.0 16446 53109 129508 151627 2 9 13535104 18432000 1833 130560 0 47655360 99.975 2264921 37920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:33:14] CVMFS is ok
[2025-10-12 12:33:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:33:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:33:14] Further information can be found at the LHC@home message board.
[2025-10-12 12:33:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:33:14] Checking for apptainer binary...
[2025-10-12 12:33:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:33:14] Running /usr/bin/apptainer --version
[2025-10-12 12:33:14] apptainer version 1.3.2-1.el7
[2025-10-12 12:33:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:33:15] c-206-26.aglt2.org
[2025-10-12 12:33:15] apptainer works
[2025-10-12 12:33:15] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:33:15] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:33:15] Starting ATLAS job with PandaID=6839865801
[2025-10-12 12:33:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:40:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:40:52] 2025-10-12 19:39:46,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,402 | INFO     | time since job start (11180s) is within the limit (172800.0s)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,741 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 15:40:52] 2025-10-12 19:39:47,747 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2405.8333333333335
[2025-10-12 15:40:52] 2025-10-12 19:39:47,752 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839865801/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,752 | INFO     | extracted standard info from prmon json
[2025-10-12 15:40:52] 2025-10-12 19:39:47,753 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:40:52] 2025-10-12 19:39:47,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:40:52] 2025-10-12 19:39:47,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:40:52] 2025-10-12 19:39:47,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:40:52] 2025-10-12 19:39:47,759 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:40:52] 2025-10-12 19:39:47,759 | INFO     | sum of square deviations: 1900284932.0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,761 | INFO     | sum of deviations: -10194418270.999998
[2025-10-12 15:40:52] 2025-10-12 19:39:47,761 | INFO     | mean x: 1760292384.0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,761 | INFO     | mean y: 2511603.081967213
[2025-10-12 15:40:52] 2025-10-12 19:39:47,761 | INFO     | -- intersect: 9445914820.969368
[2025-10-12 15:40:52] 2025-10-12 19:39:47,762 | INFO     | intersect: 9445914820.969368
[2025-10-12 15:40:52] 2025-10-12 19:39:47,762 | INFO     | chi2: 1.5754364844210358
[2025-10-12 15:40:52] 2025-10-12 19:39:47,762 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 15:40:52] 2025-10-12 19:39:47,764 | INFO     | sum of deviations: -9648318455.000002
[2025-10-12 15:40:52] 2025-10-12 19:39:47,764 | INFO     | mean x: 1760292231.5
[2025-10-12 15:40:52] 2025-10-12 19:39:47,764 | INFO     | mean y: 2512152.808988764
[2025-10-12 15:40:52] 2025-10-12 19:39:47,765 | INFO     | -- intersect: 9714579341.191126
[2025-10-12 15:40:52] 2025-10-12 19:39:47,765 | INFO     | intersect: 9714579341.191126
[2025-10-12 15:40:52] 2025-10-12 19:39:47,765 | INFO     | chi2: 1.5747186833889206
[2025-10-12 15:40:52] 2025-10-12 19:39:47,765 | INFO     | current chi2=1.5747186833889206 (change=0.04556204196191062 %)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,765 | INFO     | right removable region: 177
[2025-10-12 15:40:52] 2025-10-12 19:39:47,766 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 15:40:52] 2025-10-12 19:39:47,767 | INFO     | sum of deviations: -36436661245.49999
[2025-10-12 15:40:52] 2025-10-12 19:39:47,768 | INFO     | mean x: 1760292536.5
[2025-10-12 15:40:52] 2025-10-12 19:39:47,768 | INFO     | mean y: 2537668.286516854
[2025-10-12 15:40:52] 2025-10-12 19:39:47,768 | INFO     | -- intersect: 36679950950.39361
[2025-10-12 15:40:52] 2025-10-12 19:39:47,768 | INFO     | intersect: 36679950950.39361
[2025-10-12 15:40:52] 2025-10-12 19:39:47,768 | INFO     | chi2: 0.18667268072265134
[2025-10-12 15:40:52] 2025-10-12 19:39:47,769 | INFO     | current chi2=0.18667268072265134 (change=88.15105003796756 %)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,769 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,770 | INFO     | sum of deviations: -35367415395.00001
[2025-10-12 15:40:52] 2025-10-12 19:39:47,771 | INFO     | mean x: 1760292689.0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,771 | INFO     | mean y: 2536472.6242774567
[2025-10-12 15:40:52] 2025-10-12 19:39:47,771 | INFO     | -- intersect: 38780588253.899086
[2025-10-12 15:40:52] 2025-10-12 19:39:47,771 | INFO     | intersect: 38780588253.899086
[2025-10-12 15:40:52] 2025-10-12 19:39:47,772 | INFO     | chi2: 0.1684097134176934
[2025-10-12 15:40:52] 2025-10-12 19:39:47,772 | INFO     | current chi2=0.1684097134176934 (change=9.783417281124342 %)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,772 | INFO     | left removable region: 20
[2025-10-12 15:40:52] 2025-10-12 19:39:47,772 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,774 | INFO     | sum of deviations: -23861793339.999996
[2025-10-12 15:40:52] 2025-10-12 19:39:47,774 | INFO     | mean x: 1760292811.0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,774 | INFO     | mean y: 2525420.1146496814
[2025-10-12 15:40:52] 2025-10-12 19:39:47,774 | INFO     | -- intersect: 35007376446.72824
[2025-10-12 15:40:52] 2025-10-12 19:39:47,774 | INFO     | intersect: 35007376446.72824
[2025-10-12 15:40:52] 2025-10-12 19:39:47,775 | INFO     | chi2: 0.15018838587985245
[2025-10-12 15:40:52] 2025-10-12 19:39:47,775 | INFO     | -- intersect: 35007376446.72824
[2025-10-12 15:40:52] 2025-10-12 19:39:47,775 | INFO     | current memory leak: -19.89 B/s (using 157 data points, chi2=0.15)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,775 | INFO     | could have reported an average CPU frequency of 2528 MHz (10 samples)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,776 | INFO     | ..............................
[2025-10-12 15:40:52] 2025-10-12 19:39:47,776 | INFO     | . Timing measurements:
[2025-10-12 15:40:52] 2025-10-12 19:39:47,776 | INFO     | . get job = 0 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,776 | INFO     | . initial setup = 2 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,776 | INFO     | . payload setup = 5 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,777 | INFO     | . stage-in = 0 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,777 | INFO     | . payload execution = 11148 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,777 | INFO     | . stage-out = 2 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,777 | INFO     | . log creation = 0 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,777 | INFO     | ..............................
[2025-10-12 15:40:52] 2025-10-12 19:39:47,891 | INFO     | 
[2025-10-12 15:40:52] 2025-10-12 19:39:47,891 | INFO     | job summary report
[2025-10-12 15:40:52] 2025-10-12 19:39:47,891 | INFO     | --------------------------------------------------
[2025-10-12 15:40:52] 2025-10-12 19:39:47,891 | INFO     | PanDA job id: 6839865801
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | task id: 46676269
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | errors: (none)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | pilot state: finished 
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | transexitcode: 0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | exeerrorcode: 0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | exeerrordiag: 
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | exitcode: 0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | exitmsg: OK
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | cpuconsumptiontime: 84038 s
[2025-10-12 15:40:52] 2025-10-12 19:39:47,892 | INFO     | nevents: 400
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | neventsw: 0
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | pid: 9406
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | pgrp: 9406
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | corecount: 8
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | event service: False
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | sizes: {0: 2347977, 1: 2348833, 5: 2349095, 12: 2349151, 11157: 2378307, 11160: 2387305, 11162: 2387489, 11166: 2387683}
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | --------------------------------------------------
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | 
[2025-10-12 15:40:52] 2025-10-12 19:39:47,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 15:40:52] 2025-10-12 19:39:47,911 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,912 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,912 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,912 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:40:52] 2025-10-12 19:39:47,915 | INFO     | job 6839865801 has completed (purged errors)
[2025-10-12 15:40:52] 2025-10-12 19:39:47,915 | INFO     | overall cleanup function is called
[2025-10-12 15:40:52] 2025-10-12 19:39:48,923 | INFO     | --- collectZombieJob: --- 10, [9406]
[2025-10-12 15:40:52] 2025-10-12 19:39:48,924 | INFO     | zombie collector waiting for pid 9406
[2025-10-12 15:40:52] 2025-10-12 19:39:48,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:40:52] 2025-10-12 19:39:48,924 | INFO     | collected zombie processes
[2025-10-12 15:40:52] 2025-10-12 19:39:48,924 | INFO     | will attempt to kill all subprocesses of pid=9406
[2025-10-12 15:40:52] 2025-10-12 19:39:49,057 | INFO     | process IDs to be killed: [9406] (in reverse order)
[2025-10-12 15:40:52] 2025-10-12 19:39:49,120 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:40:52] 2025-10-12 19:39:49,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:40:52] 2025-10-12 19:39:49,125 | INFO     | did not find any defunct processes belonging to 9406
[2025-10-12 15:40:52] 2025-10-12 19:39:49,129 | INFO     | did not find any defunct processes belonging to 9406
[2025-10-12 15:40:52] 2025-10-12 19:39:49,129 | INFO     | ready for new job
[2025-10-12 15:40:52] 2025-10-12 19:39:49,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:40:52] 2025-10-12 19:39:49,131 | INFO     | ***************************************
[2025-10-12 15:40:52] 2025-10-12 19:39:49,131 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:40:52] 2025-10-12 19:39:49,131 | INFO     | ***************************************
[2025-10-12 15:40:52] 2025-10-12 19:39:49,131 | INFO     | 
[2025-10-12 15:40:52] 2025-10-12 19:39:49,132 | INFO     | architecture information:
[2025-10-12 15:40:52] 2025-10-12 19:39:49,133 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:40:52] 2025-10-12 19:39:49,148 | INFO     | cat /etc/os-release:
[2025-10-12 15:40:52] NAME="CentOS Linux"
[2025-10-12 15:40:52] VERSION="7 (Core)"
[2025-10-12 15:40:52] ID="centos"
[2025-10-12 15:40:52] ID_LIKE="rhel fedora"
[2025-10-12 15:40:52] VERSION_ID="7"
[2025-10-12 15:40:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:40:52] ANSI_COLOR="0;31"
[2025-10-12 15:40:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:40:52] HOME_URL="https://www.centos.org/"
[2025-10-12 15:40:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:40:52] 
[2025-10-12 15:40:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:40:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:40:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:40:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:40:52] 
[2025-10-12 15:40:52] 2025-10-12 19:39:49,148 | INFO     | ***************************************
[2025-10-12 15:40:52] 2025-10-12 19:39:49,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 15:40:52] 2025-10-12 19:39:49,673 | INFO     | sufficient remaining disk space (28214034432 B)
[2025-10-12 15:40:52] 2025-10-12 19:39:49,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:40:52] 2025-10-12 19:39:49,673 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:40:52] 2025-10-12 19:39:49,674 | INFO     | update_server=False
[2025-10-12 15:40:52] 2025-10-12 19:39:49,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:40:52] 2025-10-12 19:39:49,674 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:40:52] 2025-10-12 19:39:49,727 | INFO     | all data control threads have been joined
[2025-10-12 15:40:52] 2025-10-12 19:39:49,937 | INFO     | all payload control threads have been joined
[2025-10-12 15:40:52] 2025-10-12 19:39:49,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:40:52] 2025-10-12 19:39:49,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:40:52] 2025-10-12 19:39:49,959 | INFO     | aborting loop
[2025-10-12 15:40:52] 2025-10-12 19:39:50,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:40:52] 2025-10-12 19:39:50,679 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:50,680 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:50,733 | INFO     | [data] control thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:50,897 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:50,942 | INFO     | [payload] control thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:50,951 | INFO     | all job control threads have been joined
[2025-10-12 15:40:52] 2025-10-12 19:39:50,954 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:50,964 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:51,068 | INFO     | [job] validate thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:51,078 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:51,542 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:51,621 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:51,956 | INFO     | [job] control thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:51,959 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:52,025 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:39:54,411 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:40:00,357 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:40:52] 2025-10-12 19:40:01,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:40:52] 2025-10-12 19:40:20,635 | INFO     | PID=1842 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 15:40:52] 2025-10-12 19:40:20,635 | INFO     | .. there are 3 such processes running
[2025-10-12 15:40:52] 2025-10-12 19:40:20,636 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:40:52] 2025-10-12 19:40:20,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:40:52] 2025-10-12 19:40:20,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:40:52] 2025-10-12 19:40:44,989 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:40:52] 2025-10-12 19:40:46,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721492838208)>', '<ExcThread(monitor, started 139720906495744)>']
[2025-10-12 15:40:52] 2025-10-12 19:40:47,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:40:52] 2025-10-12 19:40:47,779 | INFO     | [monitor] control thread has ended
[2025-10-12 15:40:52] 2025-10-12 19:40:51,998 | INFO     | all workflow threads have been joined
[2025-10-12 15:40:52] 2025-10-12 19:40:51,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:40:52] 2025-10-12 19:40:51,998 | INFO     | traces error code: 0
[2025-10-12 15:40:52] 2025-10-12 19:40:51,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:40:52] 2025-10-12 19:40:52,130 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:40:52] 2025-10-12 19:40:52,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:40:52] 2025-10-12 19:40:52,135 [wrapper] pilotpid: 1842
[2025-10-12 15:40:52] 2025-10-12 19:40:52,138 [wrapper] Pilot exit status: 0
[2025-10-12 15:40:52] 2025-10-12 19:40:52,158 [wrapper] pandaids: 6839865801
[2025-10-12 15:40:52] 2025-10-12 19:40:52,198 [wrapper] cleanup supervisor_pilot 27606 1843
[2025-10-12 15:40:52] 2025-10-12 19:40:52,200 [wrapper] Test setup, not cleaning
[2025-10-12 15:40:52] 2025-10-12 19:40:52,203 [wrapper] apfmon messages muted
[2025-10-12 15:40:52] 2025-10-12 19:40:52,206 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:40:52] 2025-10-12 19:40:52,208 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:40:52]  *** Error codes and diagnostics ***
[2025-10-12 15:40:52]     "exeErrorCode": 0,
[2025-10-12 15:40:52]     "exeErrorDiag": "",
[2025-10-12 15:40:52]     "pilotErrorCode": 0,
[2025-10-12 15:40:52]     "pilotErrorDiag": "",
[2025-10-12 15:40:52]  *** Listing of results directory ***
[2025-10-12 15:40:52] total 411172
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 15:40:52] -rwx------ 1 boincer umatlas     36292 Oct 12 05:54 runpilot2-wrapper.sh
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:54 queuedata.json
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:40:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:33 run_atlas
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:33 job.xml
[2025-10-12 15:40:52] -rw-r--r-- 2 boincer umatlas 220372928 Oct 12 12:33 EVNT.46676267._000571.pool.root.1
[2025-10-12 15:40:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:33 start_atlas.sh
[2025-10-12 15:40:52] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:33 shared
[2025-10-12 15:40:52] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 12:33 input.tar.gz
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:33 boinc_lockfile
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 12:33 pandaJob.out
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas    975528 Oct 12 12:33 agis_schedconf.cvmfs.json
[2025-10-12 15:40:52] drwx------ 5 boincer umatlas      4096 Oct 12 12:33 pilot3
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas 192746459 Oct 12 15:39 HITS.46676269._075536.pool.root.1
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:39 boinc_task_state.xml
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas      1069 Oct 12 15:39 memory_monitor_summary.json
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas   1560580 Oct 12 15:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas    436651 Oct 12 15:39 log.46676269._075536.job.log.tgz.1
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas      7865 Oct 12 15:39 heartbeat.json
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas        95 Oct 12 15:40 pilot_heartbeat.json
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 15:40 init_data.xml
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:40 boinc_mmap_file
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:40 wrapper_checkpoint.txt
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas      4892 Oct 12 15:40 pilotlog.txt
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas   1569878 Oct 12 15:40 log.46676269._075536.job.log.1
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas       357 Oct 12 15:40 output.list
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:40 runtime_log
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas   2027520 Oct 12 15:40 result.tar.gz
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 15:40 runtime_log.err
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas       663 Oct 12 15:40 MdPNDmCy7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmaTMDm0s8hQn.diag
[2025-10-12 15:40:52] -rw-r--r-- 1 boincer umatlas     21084 Oct 12 15:40 stderr.txt
[2025-10-12 15:40:52] HITS file was successfully produced:
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas 192746459 Oct 12 15:39 shared/HITS.pool.root.1
[2025-10-12 15:40:52]  *** Contents of shared directory: ***
[2025-10-12 15:40:52] total 406004
[2025-10-12 15:40:52] -rw-r--r-- 2 boincer umatlas 220372928 Oct 12 12:33 ATLAS.root_0
[2025-10-12 15:40:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:33 start_atlas.sh
[2025-10-12 15:40:52] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 12:33 input.tar.gz
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas 192746459 Oct 12 15:39 HITS.pool.root.1
[2025-10-12 15:40:52] -rw------- 1 boincer umatlas   2027520 Oct 12 15:40 result.tar.gz
15:40:53 (28519): run_atlas exited; CPU time 84170.127258
15:40:53 (28519): called boinc_finish(0)

</stderr_txt>
]]>

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