Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:09 (3726): wrapper (7.7.26015): starting
12:29:09 (3726): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:29:09] Arguments: --nthreads 8
[2025-10-12 12:29:09] Threads: 8
[2025-10-12 12:29:09] Checking for CVMFS
[2025-10-12 12:29:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:29:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:29:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:29:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:29:09] 2.11.2.0 2847 8740 71488 151625 2 59 12564774 20275201 1 130560 0 5289120 99.988 292234 31463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:29:09] CVMFS is ok
[2025-10-12 12:29:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:29:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:29:09] Further information can be found at the LHC@home message board.
[2025-10-12 12:29:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:29:09] Checking for apptainer binary...
[2025-10-12 12:29:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:29:09] Running /usr/bin/apptainer --version
[2025-10-12 12:29:09] apptainer version 1.3.2-1.el7
[2025-10-12 12:29:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:29:11] c-204-19.aglt2.org
[2025-10-12 12:29:11] apptainer works
[2025-10-12 12:29:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:29:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:29:11] Starting ATLAS job with PandaID=6839869910
[2025-10-12 12:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:29:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:29:46] 2025-10-12 18:29:00,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:29:46] 2025-10-12 18:29:00,590 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:29:46] 2025-10-12 18:29:00,590 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,591 | INFO     | sum of deviations: 14810009440.000002
[2025-10-12 14:29:46] 2025-10-12 18:29:00,591 | INFO     | mean x: 1760290138.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,591 | INFO     | mean y: 2504970.4615384615
[2025-10-12 14:29:46] 2025-10-12 18:29:00,591 | INFO     | -- intersect: -52494594521.785126
[2025-10-12 14:29:46] 2025-10-12 18:29:00,591 | INFO     | intersect: -52494594521.785126
[2025-10-12 14:29:46] 2025-10-12 18:29:00,592 | INFO     | chi2: 1.4693057135179493
[2025-10-12 14:29:46] 2025-10-12 18:29:00,592 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,593 | INFO     | sum of deviations: 14288580738.499998
[2025-10-12 14:29:46] 2025-10-12 18:29:00,593 | INFO     | mean x: 1760289985.5
[2025-10-12 14:29:46] 2025-10-12 18:29:00,593 | INFO     | mean y: 2503665.8303571427
[2025-10-12 14:29:46] 2025-10-12 18:29:00,593 | INFO     | -- intersect: -57737318570.28616
[2025-10-12 14:29:46] 2025-10-12 18:29:00,593 | INFO     | intersect: -57737318570.28616
[2025-10-12 14:29:46] 2025-10-12 18:29:00,593 | INFO     | chi2: 1.4712509800730527
[2025-10-12 14:29:46] 2025-10-12 18:29:00,594 | INFO     | current chi2=1.4712509800730527 (change=-0.13239358815571944 %)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,594 | INFO     | right removable region: 111
[2025-10-12 14:29:46] 2025-10-12 18:29:00,594 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | sum of deviations: -4317834736.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | mean x: 1760290290.5
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | mean y: 2552064.285714286
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | -- intersect: 17450824769.716705
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | intersect: 17450824769.716705
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | chi2: 0.01058689046834841
[2025-10-12 14:29:46] 2025-10-12 18:29:00,595 | INFO     | current chi2=0.01058689046834841 (change=99.27946305721494 %)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,596 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,596 | INFO     | sum of deviations: -4798392492.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,596 | INFO     | mean x: 1760290443.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,596 | INFO     | mean y: 2553353.3644859814
[2025-10-12 14:29:46] 2025-10-12 18:29:00,597 | INFO     | -- intersect: 22240171966.007244
[2025-10-12 14:29:46] 2025-10-12 18:29:00,597 | INFO     | intersect: 22240171966.007244
[2025-10-12 14:29:46] 2025-10-12 18:29:00,597 | INFO     | chi2: 0.0069350267246974726
[2025-10-12 14:29:46] 2025-10-12 18:29:00,597 | INFO     | current chi2=0.0069350267246974726 (change=34.494205400243835 %)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,597 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 14:29:46] 2025-10-12 18:29:00,598 | INFO     | sum of deviations: -4345731744.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,598 | INFO     | mean x: 1760290595.5
[2025-10-12 14:29:46] 2025-10-12 18:29:00,598 | INFO     | mean y: 2551978.2352941176
[2025-10-12 14:29:46] 2025-10-12 18:29:00,598 | INFO     | -- intersect: 23251863082.20633
[2025-10-12 14:29:46] 2025-10-12 18:29:00,598 | INFO     | intersect: 23251863082.20633
[2025-10-12 14:29:46] 2025-10-12 18:29:00,599 | INFO     | chi2: 0.0066945875362016865
[2025-10-12 14:29:46] 2025-10-12 18:29:00,599 | INFO     | current chi2=0.0066945875362016865 (change=3.467026127520436 %)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,599 | INFO     | left removable region: 30
[2025-10-12 14:29:46] 2025-10-12 18:29:00,599 | INFO     | sum of square deviations: 164765880.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,599 | INFO     | sum of deviations: -2068830189.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | mean x: 1760290870.0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | mean y: 2544860.938271605
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | -- intersect: 22105075392.60584
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | intersect: 22105075392.60584
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | chi2: 0.005835697725193047
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | -- intersect: 22105075392.60584
[2025-10-12 14:29:46] 2025-10-12 18:29:00,600 | INFO     | current memory leak: -12.56 B/s (using 81 data points, chi2=0.01)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,601 | INFO     | could have reported an average CPU frequency of 1955 MHz (7 samples)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,601 | INFO     | ..............................
[2025-10-12 14:29:46] 2025-10-12 18:29:00,601 | INFO     | . Timing measurements:
[2025-10-12 14:29:46] 2025-10-12 18:29:00,601 | INFO     | . get job = 0 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,601 | INFO     | . initial setup = 2 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,601 | INFO     | . payload setup = 8 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,602 | INFO     | . stage-in = 0 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,602 | INFO     | . payload execution = 7132 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,602 | INFO     | . stage-out = 0 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,602 | INFO     | . log creation = 0 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,602 | INFO     | ..............................
[2025-10-12 14:29:46] 2025-10-12 18:29:00,697 | INFO     | 
[2025-10-12 14:29:46] 2025-10-12 18:29:00,698 | INFO     | job summary report
[2025-10-12 14:29:46] 2025-10-12 18:29:00,698 | INFO     | --------------------------------------------------
[2025-10-12 14:29:46] 2025-10-12 18:29:00,698 | INFO     | PanDA job id: 6839869910
[2025-10-12 14:29:46] 2025-10-12 18:29:00,698 | INFO     | task id: 46676269
[2025-10-12 14:29:46] 2025-10-12 18:29:00,698 | INFO     | errors: (none)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:29:46] 2025-10-12 18:29:00,699 | INFO     | pilot state: finished 
[2025-10-12 14:29:46] 2025-10-12 18:29:00,699 | INFO     | transexitcode: 0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,699 | INFO     | exeerrorcode: 0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,699 | INFO     | exeerrordiag: 
[2025-10-12 14:29:46] 2025-10-12 18:29:00,699 | INFO     | exitcode: 0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,700 | INFO     | exitmsg: OK
[2025-10-12 14:29:46] 2025-10-12 18:29:00,700 | INFO     | cpuconsumptiontime: 53046 s
[2025-10-12 14:29:46] 2025-10-12 18:29:00,700 | INFO     | nevents: 400
[2025-10-12 14:29:46] 2025-10-12 18:29:00,700 | INFO     | neventsw: 0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,700 | INFO     | pid: 14830
[2025-10-12 14:29:46] 2025-10-12 18:29:00,700 | INFO     | pgrp: 14830
[2025-10-12 14:29:46] 2025-10-12 18:29:00,701 | INFO     | corecount: 8
[2025-10-12 14:29:46] 2025-10-12 18:29:00,701 | INFO     | event service: False
[2025-10-12 14:29:46] 2025-10-12 18:29:00,701 | INFO     | sizes: {0: 2348857, 1: 2348885, 6: 2349147, 11: 2349175, 7144: 2376430, 7145: 2376429, 7146: 2385611, 7147: 2385667, 7155: 2385861}
[2025-10-12 14:29:46] 2025-10-12 18:29:00,701 | INFO     | --------------------------------------------------
[2025-10-12 14:29:46] 2025-10-12 18:29:00,701 | INFO     | 
[2025-10-12 14:29:46] 2025-10-12 18:29:00,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:29:46] 2025-10-12 18:29:00,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,731 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:29:46] 2025-10-12 18:29:00,734 | INFO     | job 6839869910 has completed (purged errors)
[2025-10-12 14:29:46] 2025-10-12 18:29:00,734 | INFO     | overall cleanup function is called
[2025-10-12 14:29:46] 2025-10-12 18:29:01,742 | INFO     | --- collectZombieJob: --- 10, [14830]
[2025-10-12 14:29:46] 2025-10-12 18:29:01,743 | INFO     | zombie collector waiting for pid 14830
[2025-10-12 14:29:46] 2025-10-12 18:29:01,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:29:46] 2025-10-12 18:29:01,743 | INFO     | collected zombie processes
[2025-10-12 14:29:46] 2025-10-12 18:29:01,743 | INFO     | will attempt to kill all subprocesses of pid=14830
[2025-10-12 14:29:46] 2025-10-12 18:29:01,833 | INFO     | process IDs to be killed: [14830] (in reverse order)
[2025-10-12 14:29:46] 2025-10-12 18:29:01,892 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:29:46] 2025-10-12 18:29:01,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:29:46] 2025-10-12 18:29:01,896 | INFO     | did not find any defunct processes belonging to 14830
[2025-10-12 14:29:46] 2025-10-12 18:29:01,899 | INFO     | did not find any defunct processes belonging to 14830
[2025-10-12 14:29:46] 2025-10-12 18:29:01,899 | INFO     | ready for new job
[2025-10-12 14:29:46] 2025-10-12 18:29:01,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:29:46] 2025-10-12 18:29:01,901 | INFO     | ***************************************
[2025-10-12 14:29:46] 2025-10-12 18:29:01,901 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:29:46] 2025-10-12 18:29:01,901 | INFO     | ***************************************
[2025-10-12 14:29:46] 2025-10-12 18:29:01,901 | INFO     | 
[2025-10-12 14:29:46] 2025-10-12 18:29:01,901 | INFO     | architecture information:
[2025-10-12 14:29:46] 2025-10-12 18:29:01,902 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:29:46] 2025-10-12 18:29:01,921 | INFO     | cat /etc/os-release:
[2025-10-12 14:29:46] NAME="CentOS Linux"
[2025-10-12 14:29:46] VERSION="7 (Core)"
[2025-10-12 14:29:46] ID="centos"
[2025-10-12 14:29:46] ID_LIKE="rhel fedora"
[2025-10-12 14:29:46] VERSION_ID="7"
[2025-10-12 14:29:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:29:46] ANSI_COLOR="0;31"
[2025-10-12 14:29:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:29:46] HOME_URL="https://www.centos.org/"
[2025-10-12 14:29:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:29:46] 
[2025-10-12 14:29:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:29:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:29:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:29:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:29:46] 
[2025-10-12 14:29:46] 2025-10-12 18:29:01,921 | INFO     | ***************************************
[2025-10-12 14:29:46] 2025-10-12 18:29:02,425 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:29:46] 2025-10-12 18:29:02,446 | INFO     | sufficient remaining disk space (18549309440 B)
[2025-10-12 14:29:46] 2025-10-12 18:29:02,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:29:46] 2025-10-12 18:29:02,446 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:29:46] 2025-10-12 18:29:02,447 | INFO     | update_server=False
[2025-10-12 14:29:46] 2025-10-12 18:29:02,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:29:46] 2025-10-12 18:29:02,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:29:46] 2025-10-12 18:29:02,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:29:46] 2025-10-12 18:29:02,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:29:46] 2025-10-12 18:29:02,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:29:46] 2025-10-12 18:29:02,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:29:46] 2025-10-12 18:29:02,511 | INFO     | will abort loop
[2025-10-12 14:29:46] 2025-10-12 18:29:02,848 | INFO     | all data control threads have been joined
[2025-10-12 14:29:46] 2025-10-12 18:29:02,973 | INFO     | all job control threads have been joined
[2025-10-12 14:29:46] 2025-10-12 18:29:03,453 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:03,453 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:03,516 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:03,772 | INFO     | all payload control threads have been joined
[2025-10-12 14:29:46] 2025-10-12 18:29:03,797 | INFO     | [job] validate thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:03,854 | INFO     | [data] control thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:03,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:29:46] 2025-10-12 18:29:03,887 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:03,978 | INFO     | [job] control thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,453 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,454 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,687 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,735 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,778 | INFO     | [payload] control thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,832 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:04,835 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:07,892 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:29:46] 2025-10-12 18:29:26,304 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-12 14:29:46] 2025-10-12 18:29:32,321 | INFO     | PID=8047 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:29:46] 2025-10-12 18:29:32,321 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:29:46] 2025-10-12 18:29:32,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:29:46] 2025-10-12 18:29:32,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:29:46] 2025-10-12 18:29:40,061 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:29:46] 2025-10-12 18:29:40,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637333096256)>', '<ExcThread(monitor, started 139636080891648)>']
[2025-10-12 14:29:46] 2025-10-12 18:29:41,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:29:46] 2025-10-12 18:29:41,366 | INFO     | [monitor] control thread has ended
[2025-10-12 14:29:46] 2025-10-12 18:29:45,869 | INFO     | all workflow threads have been joined
[2025-10-12 14:29:46] 2025-10-12 18:29:45,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:29:46] 2025-10-12 18:29:45,872 | INFO     | traces error code: 0
[2025-10-12 14:29:46] 2025-10-12 18:29:45,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:29:46] 2025-10-12 18:29:45,978 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:29:46] 2025-10-12 18:29:45,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:29:46] 2025-10-12 18:29:45,987 [wrapper] pilotpid: 8047
[2025-10-12 14:29:46] 2025-10-12 18:29:45,991 [wrapper] Pilot exit status: 0
[2025-10-12 14:29:46] 2025-10-12 18:29:46,011 [wrapper] pandaids: 6839869910
[2025-10-12 14:29:46] 2025-10-12 18:29:46,060 [wrapper] cleanup supervisor_pilot  6890 8048
[2025-10-12 14:29:46] 2025-10-12 18:29:46,065 [wrapper] Test setup, not cleaning
[2025-10-12 14:29:46] 2025-10-12 18:29:46,070 [wrapper] apfmon messages muted
[2025-10-12 14:29:46] 2025-10-12 18:29:46,075 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:29:46] 2025-10-12 18:29:46,080 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:29:46]  *** Error codes and diagnostics ***
[2025-10-12 14:29:46]     "exeErrorCode": 0,
[2025-10-12 14:29:46]     "exeErrorDiag": "",
[2025-10-12 14:29:46]     "pilotErrorCode": 0,
[2025-10-12 14:29:46]     "pilotErrorDiag": "",
[2025-10-12 14:29:46]  *** Listing of results directory ***
[2025-10-12 14:29:46] total 412712
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:11 queuedata.json
[2025-10-12 14:29:46] -rwx------ 1 boincer umatlas     36292 Oct 12 07:12 runpilot2-wrapper.sh
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:29:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:29 run_atlas
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:29 job.xml
[2025-10-12 14:29:46] -rw-r--r-- 2 boincer umatlas 223169534 Oct 12 12:29 EVNT.46676267._003667.pool.root.1
[2025-10-12 14:29:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:29 start_atlas.sh
[2025-10-12 14:29:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:29 shared
[2025-10-12 14:29:46] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 12:29 input.tar.gz
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:29 boinc_lockfile
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 12:29 pandaJob.out
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas    975528 Oct 12 12:29 agis_schedconf.cvmfs.json
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas   1560580 Oct 12 12:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:29:46] drwx------ 5 boincer umatlas      4096 Oct 12 12:29 pilot3
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas 192798973 Oct 12 14:28 HITS.46676269._076884.pool.root.1
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:28 boinc_task_state.xml
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas      1062 Oct 12 14:28 memory_monitor_summary.json
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas    367983 Oct 12 14:28 log.46676269._076884.job.log.tgz.1
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas      7851 Oct 12 14:29 heartbeat.json
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas        95 Oct 12 14:29 pilot_heartbeat.json
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 14:29 init_data.xml
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:29 wrapper_checkpoint.txt
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:29 boinc_mmap_file
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas      4931 Oct 12 14:29 pilotlog.txt
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas   1009913 Oct 12 14:29 log.46676269._076884.job.log.1
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas       357 Oct 12 14:29 output.list
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:29 runtime_log
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas   1392640 Oct 12 14:29 result.tar.gz
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas       659 Oct 12 14:29 TBGKDm9A9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUbjNDm1Lo4Nm.diag
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 14:29 runtime_log.err
[2025-10-12 14:29:46] -rw-r--r-- 1 boincer umatlas     20908 Oct 12 14:29 stderr.txt
[2025-10-12 14:29:46] HITS file was successfully produced:
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas 192798973 Oct 12 14:28 shared/HITS.pool.root.1
[2025-10-12 14:29:46]  *** Contents of shared directory: ***
[2025-10-12 14:29:46] total 408160
[2025-10-12 14:29:46] -rw-r--r-- 2 boincer umatlas 223169534 Oct 12 12:29 ATLAS.root_0
[2025-10-12 14:29:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:29 start_atlas.sh
[2025-10-12 14:29:46] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 12:29 input.tar.gz
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas 192798973 Oct 12 14:28 HITS.pool.root.1
[2025-10-12 14:29:46] -rw------- 1 boincer umatlas   1392640 Oct 12 14:29 result.tar.gz
14:29:47 (3726): run_atlas exited; CPU time 53062.684304
14:29:47 (3726): called boinc_finish(0)

</stderr_txt>
]]>

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