Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:28:23 (24583): wrapper (7.7.26015): starting
12:28:23 (24583): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:28:23] Arguments: --nthreads 8
[2025-10-12 12:28:23] Threads: 8
[2025-10-12 12:28:23] Checking for CVMFS
[2025-10-12 12:28:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:28:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:28:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:28:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:28:24] 2.11.2.0 11495 53141 129492 151625 1 188 17627939 18432000 1833 130560 0 48605983 99.976 2395752 27901 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:28:24] CVMFS is ok
[2025-10-12 12:28:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:28:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:28:24] Further information can be found at the LHC@home message board.
[2025-10-12 12:28:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:28:24] Checking for apptainer binary...
[2025-10-12 12:28:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:28:24] Running /usr/bin/apptainer --version
[2025-10-12 12:28:24] apptainer version 1.3.2-1.el7
[2025-10-12 12:28:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:28:25] c-206-31.aglt2.org
[2025-10-12 12:28:25] apptainer works
[2025-10-12 12:28:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:28:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:28:25] Starting ATLAS job with PandaID=6839989781
[2025-10-12 12:28:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:26:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:26:00] 2025-10-12 19:25:05,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:26:00] 2025-10-12 19:25:05,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:26:00] 2025-10-12 19:25:05,603 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:26:00] 2025-10-12 19:25:05,605 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:26:00] 2025-10-12 19:25:05,605 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 15:26:00] 2025-10-12 19:25:05,606 | INFO     | sum of deviations: 12655706721.999998
[2025-10-12 15:26:00] 2025-10-12 19:25:05,606 | INFO     | mean x: 1760291818.5
[2025-10-12 15:26:00] 2025-10-12 19:25:05,606 | INFO     | mean y: 2457143.264367816
[2025-10-12 15:26:00] 2025-10-12 19:25:05,607 | INFO     | -- intersect: -13635811741.305412
[2025-10-12 15:26:00] 2025-10-12 19:25:05,607 | INFO     | intersect: -13635811741.305412
[2025-10-12 15:26:00] 2025-10-12 19:25:05,607 | INFO     | chi2: 2.375567398883704
[2025-10-12 15:26:00] 2025-10-12 19:25:05,607 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,608 | INFO     | sum of deviations: 23904505417.999996
[2025-10-12 15:26:00] 2025-10-12 19:25:05,609 | INFO     | mean x: 1760291666.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,609 | INFO     | mean y: 2469376.99408284
[2025-10-12 15:26:00] 2025-10-12 19:25:05,609 | INFO     | -- intersect: -28112723275.80468
[2025-10-12 15:26:00] 2025-10-12 19:25:05,609 | INFO     | intersect: -28112723275.80468
[2025-10-12 15:26:00] 2025-10-12 19:25:05,610 | INFO     | chi2: 1.5624390979808769
[2025-10-12 15:26:00] 2025-10-12 19:25:05,610 | INFO     | current chi2=1.5624390979808769 (change=34.228803665386295 %)
[2025-10-12 15:26:00] 2025-10-12 19:25:05,610 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,612 | INFO     | sum of deviations: 23198143901.000008
[2025-10-12 15:26:00] 2025-10-12 19:25:05,612 | INFO     | mean x: 1760291513.5
[2025-10-12 15:26:00] 2025-10-12 19:25:05,612 | INFO     | mean y: 2468541.573170732
[2025-10-12 15:26:00] 2025-10-12 19:25:05,612 | INFO     | -- intersect: -29854383274.223305
[2025-10-12 15:26:00] 2025-10-12 19:25:05,612 | INFO     | intersect: -29854383274.223305
[2025-10-12 15:26:00] 2025-10-12 19:25:05,613 | INFO     | chi2: 1.5636782619675118
[2025-10-12 15:26:00] 2025-10-12 19:25:05,613 | INFO     | current chi2=1.5636782619675118 (change=-0.07930958641756253 %)
[2025-10-12 15:26:00] 2025-10-12 19:25:05,613 | INFO     | right removable region: 163
[2025-10-12 15:26:00] 2025-10-12 19:25:05,614 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,615 | INFO     | sum of deviations: -15396315027.000002
[2025-10-12 15:26:00] 2025-10-12 19:25:05,615 | INFO     | mean x: 1760291971.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,615 | INFO     | mean y: 2488062.917159763
[2025-10-12 15:26:00] 2025-10-12 19:25:05,615 | INFO     | -- intersect: 18110808254.44779
[2025-10-12 15:26:00] 2025-10-12 19:25:05,616 | INFO     | intersect: 18110808254.44779
[2025-10-12 15:26:00] 2025-10-12 19:25:05,616 | INFO     | chi2: 0.904711780231933
[2025-10-12 15:26:00] 2025-10-12 19:25:05,616 | INFO     | current chi2=0.904711780231933 (change=61.91597086838859 %)
[2025-10-12 15:26:00] 2025-10-12 19:25:05,617 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,618 | INFO     | sum of deviations: -19678728527.000004
[2025-10-12 15:26:00] 2025-10-12 19:25:05,618 | INFO     | mean x: 1760292123.5
[2025-10-12 15:26:00] 2025-10-12 19:25:05,618 | INFO     | mean y: 2493065.3048780486
[2025-10-12 15:26:00] 2025-10-12 19:25:05,619 | INFO     | -- intersect: 25329738540.86164
[2025-10-12 15:26:00] 2025-10-12 19:25:05,619 | INFO     | intersect: 25329738540.86164
[2025-10-12 15:26:00] 2025-10-12 19:25:05,619 | INFO     | chi2: 0.8572315729549633
[2025-10-12 15:26:00] 2025-10-12 19:25:05,619 | INFO     | current chi2=0.8572315729549633 (change=5.2481031323365315 %)
[2025-10-12 15:26:00] 2025-10-12 19:25:05,620 | INFO     | left removable region: 20
[2025-10-12 15:26:00] 2025-10-12 19:25:05,620 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,621 | INFO     | sum of deviations: -6319803740.000002
[2025-10-12 15:26:00] 2025-10-12 19:25:05,621 | INFO     | mean x: 1760292093.0
[2025-10-12 15:26:00] 2025-10-12 19:25:05,621 | INFO     | mean y: 2505259.5524475523
[2025-10-12 15:26:00] 2025-10-12 19:25:05,622 | INFO     | -- intersect: 12271896968.750803
[2025-10-12 15:26:00] 2025-10-12 19:25:05,622 | INFO     | intersect: 12271896968.750803
[2025-10-12 15:26:00] 2025-10-12 19:25:05,622 | INFO     | chi2: 0.016866806993027398
[2025-10-12 15:26:00] 2025-10-12 19:25:05,622 | INFO     | -- intersect: 12271896968.750803
[2025-10-12 15:26:00] 2025-10-12 19:25:05,623 | INFO     | current memory leak: -6.97 B/s (using 143 data points, chi2=0.02)
[2025-10-12 15:26:00] 2025-10-12 19:25:05,623 | INFO     | could have reported an average CPU frequency of 2561 MHz (9 samples)
[2025-10-12 15:26:00] 2025-10-12 19:25:05,623 | INFO     | ..............................
[2025-10-12 15:26:00] 2025-10-12 19:25:05,624 | INFO     | . Timing measurements:
[2025-10-12 15:26:00] 2025-10-12 19:25:05,624 | INFO     | . get job = 0 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,624 | INFO     | . initial setup = 2 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,624 | INFO     | . payload setup = 5 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,624 | INFO     | . stage-in = 0 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,624 | INFO     | . payload execution = 10560 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,625 | INFO     | . stage-out = 0 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,625 | INFO     | . log creation = 0 s
[2025-10-12 15:26:00] 2025-10-12 19:25:05,625 | INFO     | ..............................
[2025-10-12 15:26:00] 2025-10-12 19:25:06,183 | INFO     | 
[2025-10-12 15:26:00] 2025-10-12 19:25:06,183 | INFO     | job summary report
[2025-10-12 15:26:00] 2025-10-12 19:25:06,183 | INFO     | --------------------------------------------------
[2025-10-12 15:26:00] 2025-10-12 19:25:06,183 | INFO     | PanDA job id: 6839989781
[2025-10-12 15:26:00] 2025-10-12 19:25:06,183 | INFO     | task id: 46676269
[2025-10-12 15:26:00] 2025-10-12 19:25:06,184 | INFO     | errors: (none)
[2025-10-12 15:26:00] 2025-10-12 19:25:06,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:26:00] 2025-10-12 19:25:06,184 | INFO     | pilot state: finished 
[2025-10-12 15:26:00] 2025-10-12 19:25:06,184 | INFO     | transexitcode: 0
[2025-10-12 15:26:00] 2025-10-12 19:25:06,184 | INFO     | exeerrorcode: 0
[2025-10-12 15:26:00] 2025-10-12 19:25:06,184 | INFO     | exeerrordiag: 
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | exitcode: 0
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | exitmsg: OK
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | cpuconsumptiontime: 79190 s
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | nevents: 400
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | neventsw: 0
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | pid: 4387
[2025-10-12 15:26:00] 2025-10-12 19:25:06,185 | INFO     | pgrp: 4387
[2025-10-12 15:26:00] 2025-10-12 19:25:06,186 | INFO     | corecount: 8
[2025-10-12 15:26:00] 2025-10-12 19:25:06,186 | INFO     | event service: False
[2025-10-12 15:26:00] 2025-10-12 19:25:06,186 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10569: 2378060, 10570: 2387058, 10571: 2387242, 10574: 2387500}
[2025-10-12 15:26:00] 2025-10-12 19:25:06,186 | INFO     | --------------------------------------------------
[2025-10-12 15:26:00] 2025-10-12 19:25:06,186 | INFO     | 
[2025-10-12 15:26:00] 2025-10-12 19:25:06,187 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 15:26:00] 2025-10-12 19:25:06,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:26:00] 2025-10-12 19:25:06,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:26:00] 2025-10-12 19:25:06,208 | INFO     | job 6839989781 has completed (purged errors)
[2025-10-12 15:26:00] 2025-10-12 19:25:06,208 | INFO     | overall cleanup function is called
[2025-10-12 15:26:00] 2025-10-12 19:25:07,216 | INFO     | --- collectZombieJob: --- 10, [4387]
[2025-10-12 15:26:00] 2025-10-12 19:25:07,216 | INFO     | zombie collector waiting for pid 4387
[2025-10-12 15:26:00] 2025-10-12 19:25:07,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:26:00] 2025-10-12 19:25:07,216 | INFO     | collected zombie processes
[2025-10-12 15:26:00] 2025-10-12 19:25:07,216 | INFO     | will attempt to kill all subprocesses of pid=4387
[2025-10-12 15:26:00] 2025-10-12 19:25:07,384 | INFO     | process IDs to be killed: [4387] (in reverse order)
[2025-10-12 15:26:00] 2025-10-12 19:25:07,446 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:26:00] 2025-10-12 19:25:07,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:26:00] 2025-10-12 19:25:07,449 | INFO     | did not find any defunct processes belonging to 4387
[2025-10-12 15:26:00] 2025-10-12 19:25:07,454 | INFO     | did not find any defunct processes belonging to 4387
[2025-10-12 15:26:00] 2025-10-12 19:25:07,454 | INFO     | ready for new job
[2025-10-12 15:26:00] 2025-10-12 19:25:07,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:26:00] 2025-10-12 19:25:07,456 | INFO     | ***************************************
[2025-10-12 15:26:00] 2025-10-12 19:25:07,456 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:26:00] 2025-10-12 19:25:07,457 | INFO     | ***************************************
[2025-10-12 15:26:00] 2025-10-12 19:25:07,457 | INFO     | 
[2025-10-12 15:26:00] 2025-10-12 19:25:07,458 | INFO     | architecture information:
[2025-10-12 15:26:00] 2025-10-12 19:25:07,458 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:26:00] 2025-10-12 19:25:07,471 | INFO     | cat /etc/os-release:
[2025-10-12 15:26:00] NAME="CentOS Linux"
[2025-10-12 15:26:00] VERSION="7 (Core)"
[2025-10-12 15:26:00] ID="centos"
[2025-10-12 15:26:00] ID_LIKE="rhel fedora"
[2025-10-12 15:26:00] VERSION_ID="7"
[2025-10-12 15:26:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:26:00] ANSI_COLOR="0;31"
[2025-10-12 15:26:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:26:00] HOME_URL="https://www.centos.org/"
[2025-10-12 15:26:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:26:00] 
[2025-10-12 15:26:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:26:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:26:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:26:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:26:00] 
[2025-10-12 15:26:00] 2025-10-12 19:25:07,472 | INFO     | ***************************************
[2025-10-12 15:26:00] 2025-10-12 19:25:07,974 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 15:26:00] 2025-10-12 19:25:07,991 | INFO     | sufficient remaining disk space (28325183488 B)
[2025-10-12 15:26:00] 2025-10-12 19:25:07,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:26:00] 2025-10-12 19:25:07,992 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:26:00] 2025-10-12 19:25:07,992 | INFO     | update_server=False
[2025-10-12 15:26:00] 2025-10-12 19:25:07,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:26:00] 2025-10-12 19:25:07,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:26:00] 2025-10-12 19:25:07,993 | INFO     | aborting loop
[2025-10-12 15:26:00] 2025-10-12 19:25:07,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:26:00] 2025-10-12 19:25:08,234 | INFO     | all job control threads have been joined
[2025-10-12 15:26:00] 2025-10-12 19:25:08,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:26:00] 2025-10-12 19:25:08,989 | INFO     | all data control threads have been joined
[2025-10-12 15:26:00] 2025-10-12 19:25:08,994 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:08,994 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,198 | INFO     | all payload control threads have been joined
[2025-10-12 15:26:00] 2025-10-12 19:25:09,239 | INFO     | [job] control thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,244 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,451 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,498 | INFO     | [job] validate thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,755 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,877 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,936 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:09,994 | INFO     | [data] control thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:10,001 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:10,124 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:10,205 | INFO     | [payload] control thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:10,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:26:00] 2025-10-12 19:25:11,753 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:12,414 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:26:00] 2025-10-12 19:25:37,896 | INFO     | PID=28542 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:26:00] 2025-10-12 19:25:37,896 | INFO     | .. there are 3 such processes running
[2025-10-12 15:26:00] 2025-10-12 19:25:37,897 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:26:00] 2025-10-12 19:25:37,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:26:00] 2025-10-12 19:25:37,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:26:00] 2025-10-12 19:25:53,217 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:26:00] 2025-10-12 19:25:54,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816206088000)>', '<ExcThread(monitor, started 139815899076352)>']
[2025-10-12 15:26:00] 2025-10-12 19:25:54,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:26:00] 2025-10-12 19:25:54,973 | INFO     | [monitor] control thread has ended
[2025-10-12 15:26:00] 2025-10-12 19:25:59,747 | INFO     | all workflow threads have been joined
[2025-10-12 15:26:00] 2025-10-12 19:25:59,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:26:00] 2025-10-12 19:25:59,747 | INFO     | traces error code: 0
[2025-10-12 15:26:00] 2025-10-12 19:25:59,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:26:00] 2025-10-12 19:25:59,880 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:26:00] 2025-10-12 19:25:59,883 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:26:00] 2025-10-12 19:25:59,885 [wrapper] pilotpid: 28542
[2025-10-12 15:26:00] 2025-10-12 19:25:59,888 [wrapper] Pilot exit status: 0
[2025-10-12 15:26:00] 2025-10-12 19:25:59,896 [wrapper] pandaids: 6839989781
[2025-10-12 15:26:00] 2025-10-12 19:25:59,934 [wrapper] cleanup supervisor_pilot 29279 28543
[2025-10-12 15:26:00] 2025-10-12 19:25:59,936 [wrapper] Test setup, not cleaning
[2025-10-12 15:26:00] 2025-10-12 19:25:59,939 [wrapper] apfmon messages muted
[2025-10-12 15:26:00] 2025-10-12 19:25:59,941 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:26:00] 2025-10-12 19:25:59,943 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:26:00]  *** Error codes and diagnostics ***
[2025-10-12 15:26:00]     "exeErrorCode": 0,
[2025-10-12 15:26:00]     "exeErrorDiag": "",
[2025-10-12 15:26:00]     "pilotErrorCode": 0,
[2025-10-12 15:26:00]     "pilotErrorDiag": "",
[2025-10-12 15:26:00]  *** Listing of results directory ***
[2025-10-12 15:26:00] total 414344
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 15:26:00] -rwx------ 1 boincer umatlas     36292 Oct 12 09:08 runpilot2-wrapper.sh
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:08 queuedata.json
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:26:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:28 run_atlas
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:28 job.xml
[2025-10-12 15:26:00] -rw-r--r-- 2 boincer umatlas 223470666 Oct 12 12:28 EVNT.46676267._003852.pool.root.1
[2025-10-12 15:26:00] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 12:28 input.tar.gz
[2025-10-12 15:26:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:28 start_atlas.sh
[2025-10-12 15:26:00] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:28 shared
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:28 boinc_lockfile
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 12:28 pandaJob.out
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas    975528 Oct 12 12:28 agis_schedconf.cvmfs.json
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas   1560580 Oct 12 12:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:26:00] drwx------ 5 boincer umatlas      4096 Oct 12 12:28 pilot3
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 15:18 init_data.xml
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas 193120453 Oct 12 15:24 HITS.46676269._079113.pool.root.1
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:24 boinc_task_state.xml
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas      1054 Oct 12 15:24 memory_monitor_summary.json
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas    406932 Oct 12 15:25 log.46676269._079113.job.log.tgz.1
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas      7858 Oct 12 15:25 heartbeat.json
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:25 wrapper_checkpoint.txt
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:25 boinc_mmap_file
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas        95 Oct 12 15:25 pilot_heartbeat.json
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas      4821 Oct 12 15:25 pilotlog.txt
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas   1489476 Oct 12 15:25 log.46676269._079113.job.log.1
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas       357 Oct 12 15:25 output.list
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:25 runtime_log
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas   1914880 Oct 12 15:25 result.tar.gz
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 15:25 runtime_log.err
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas       662 Oct 12 15:25 f21KDmOzAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFxjNDm9kdQsm.diag
[2025-10-12 15:26:00] -rw-r--r-- 1 boincer umatlas     20881 Oct 12 15:26 stderr.txt
[2025-10-12 15:26:00] HITS file was successfully produced:
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas 193120453 Oct 12 15:24 shared/HITS.pool.root.1
[2025-10-12 15:26:00]  *** Contents of shared directory: ***
[2025-10-12 15:26:00] total 409284
[2025-10-12 15:26:00] -rw-r--r-- 2 boincer umatlas 223470666 Oct 12 12:28 ATLAS.root_0
[2025-10-12 15:26:00] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 12:28 input.tar.gz
[2025-10-12 15:26:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:28 start_atlas.sh
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas 193120453 Oct 12 15:24 HITS.pool.root.1
[2025-10-12 15:26:00] -rw------- 1 boincer umatlas   1914880 Oct 12 15:25 result.tar.gz
15:26:01 (24583): run_atlas exited; CPU time 79320.869717
15:26:01 (24583): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN