Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:17:14 (31250): wrapper (7.7.26015): starting
04:17:14 (31250): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:17:14] Arguments: --nthreads 8
[2025-10-13 04:17:14] Threads: 8
[2025-10-13 04:17:14] Checking for CVMFS
[2025-10-13 04:17:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:17:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:17:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:17:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:17:17] 2.11.2.0 12512 108204 106800 151645 2 16 22686796 25165825 4632 130560 0 38365901 99.912 16278746 2670 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 04:17:17] CVMFS is ok
[2025-10-13 04:17:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:17:17] Checking for apptainer binary...
[2025-10-13 04:17:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:17:17] Running /usr/bin/apptainer --version
[2025-10-13 04:17:17] apptainer version 1.3.2-1.el7
[2025-10-13 04:17:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:17:20] cg-vwn291.simple-grid.lan
[2025-10-13 04:17:20] apptainer works
[2025-10-13 04:17:20] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:17:20] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:17:20] Starting ATLAS job with PandaID=6839385060
[2025-10-13 04:17:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:42:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:42:01] 2025-10-13 06:41:11,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:42:01] 2025-10-13 06:41:11,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:42:01] 2025-10-13 06:41:11,871 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:42:01] 2025-10-13 06:41:11,872 | INFO     | sum of square deviations: 4616114457.5
[2025-10-13 08:42:01] 2025-10-13 06:41:11,874 | INFO     | sum of deviations: 34987692957.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,874 | INFO     | mean x: 1760330044.5
[2025-10-13 08:42:01] 2025-10-13 06:41:11,874 | INFO     | mean y: 2482870.0975609757
[2025-10-13 08:42:01] 2025-10-13 06:41:11,874 | INFO     | -- intersect: -13339882807.140013
[2025-10-13 08:42:01] 2025-10-13 06:41:11,875 | INFO     | intersect: -13339882807.140013
[2025-10-13 08:42:01] 2025-10-13 06:41:11,875 | INFO     | chi2: 5.494740686623138
[2025-10-13 08:42:01] 2025-10-13 06:41:11,875 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,877 | INFO     | sum of deviations: 50932208152.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,878 | INFO     | mean x: 1760329892.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,878 | INFO     | mean y: 2491536.4522821577
[2025-10-13 08:42:01] 2025-10-13 06:41:11,878 | INFO     | -- intersect: -20654377438.018772
[2025-10-13 08:42:01] 2025-10-13 06:41:11,878 | INFO     | intersect: -20654377438.018772
[2025-10-13 08:42:01] 2025-10-13 06:41:11,878 | INFO     | chi2: 4.753198663122424
[2025-10-13 08:42:01] 2025-10-13 06:41:11,878 | INFO     | current chi2=4.753198663122424 (change=13.49548715385217 %)
[2025-10-13 08:42:01] 2025-10-13 06:41:11,879 | INFO     | right removable region: 240
[2025-10-13 08:42:01] 2025-10-13 06:41:11,879 | INFO     | sum of square deviations: 4340323240.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,881 | INFO     | sum of deviations: -44658537309.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,881 | INFO     | mean x: 1760330197.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,881 | INFO     | mean y: 2526837.950207469
[2025-10-13 08:42:01] 2025-10-13 06:41:11,881 | INFO     | -- intersect: 18114950137.29964
[2025-10-13 08:42:01] 2025-10-13 06:41:11,881 | INFO     | intersect: 18114950137.29964
[2025-10-13 08:42:01] 2025-10-13 06:41:11,882 | INFO     | chi2: 1.4470587312186503
[2025-10-13 08:42:01] 2025-10-13 06:41:11,882 | INFO     | current chi2=1.4470587312186503 (change=73.6646583752079 %)
[2025-10-13 08:42:01] 2025-10-13 06:41:11,882 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,884 | INFO     | sum of deviations: -64290213028.5
[2025-10-13 08:42:01] 2025-10-13 06:41:11,884 | INFO     | mean x: 1760330349.5
[2025-10-13 08:42:01] 2025-10-13 06:41:11,884 | INFO     | mean y: 2538049.504237288
[2025-10-13 08:42:01] 2025-10-13 06:41:11,885 | INFO     | -- intersect: 27769758369.54567
[2025-10-13 08:42:01] 2025-10-13 06:41:11,885 | INFO     | intersect: 27769758369.54567
[2025-10-13 08:42:01] 2025-10-13 06:41:11,885 | INFO     | chi2: 1.001161304125436
[2025-10-13 08:42:01] 2025-10-13 06:41:11,885 | INFO     | current chi2=1.001161304125436 (change=30.814051805464647 %)
[2025-10-13 08:42:01] 2025-10-13 06:41:11,886 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,887 | INFO     | sum of deviations: -60546062277.999985
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | mean x: 1760330502.0
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | mean y: 2535773.852813853
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | -- intersect: 27887744058.82554
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | intersect: 27887744058.82554
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | chi2: 0.9920505315159104
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | current chi2=0.9920505315159104 (change=0.9100204504492153 %)
[2025-10-13 08:42:01] 2025-10-13 06:41:11,888 | INFO     | left removable region: 30
[2025-10-13 08:42:01] 2025-10-13 06:41:11,889 | INFO     | sum of square deviations: 2871616632.5
[2025-10-13 08:42:01] 2025-10-13 06:41:11,890 | INFO     | sum of deviations: -22222266450.000004
[2025-10-13 08:42:01] 2025-10-13 06:41:11,890 | INFO     | mean x: 1760330776.5
[2025-10-13 08:42:01] 2025-10-13 06:41:11,891 | INFO     | mean y: 2531537.2285714285
[2025-10-13 08:42:01] 2025-10-13 06:41:11,891 | INFO     | -- intersect: 13625011332.333466
[2025-10-13 08:42:01] 2025-10-13 06:41:11,891 | INFO     | intersect: 13625011332.333466
[2025-10-13 08:42:01] 2025-10-13 06:41:11,891 | INFO     | chi2: 0.1423625956424424
[2025-10-13 08:42:01] 2025-10-13 06:41:11,891 | INFO     | -- intersect: 13625011332.333466
[2025-10-13 08:42:01] 2025-10-13 06:41:11,891 | INFO     | current memory leak: -7.74 B/s (using 210 data points, chi2=0.14)
[2025-10-13 08:42:01] 2025-10-13 06:41:11,892 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 08:42:01] 2025-10-13 06:41:11,892 | INFO     | ..............................
[2025-10-13 08:42:01] 2025-10-13 06:41:11,892 | INFO     | . Timing measurements:
[2025-10-13 08:42:01] 2025-10-13 06:41:11,892 | INFO     | . get job = 0 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,892 | INFO     | . initial setup = 4 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,893 | INFO     | . payload setup = 140 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,893 | INFO     | . stage-in = 0 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,893 | INFO     | . payload execution = 15148 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,893 | INFO     | . stage-out = 3 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,893 | INFO     | . log creation = 1 s
[2025-10-13 08:42:01] 2025-10-13 06:41:11,893 | INFO     | ..............................
[2025-10-13 08:42:01] 2025-10-13 06:41:12,045 | INFO     | 
[2025-10-13 08:42:01] 2025-10-13 06:41:12,045 | INFO     | job summary report
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | --------------------------------------------------
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | PanDA job id: 6839385060
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | task id: 46676269
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | errors: (none)
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | pilot state: finished 
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | transexitcode: 0
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | exeerrorcode: 0
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | exeerrordiag: 
[2025-10-13 08:42:01] 2025-10-13 06:41:12,046 | INFO     | exitcode: 0
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | exitmsg: OK
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | cpuconsumptiontime: 57548 s
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | nevents: 400
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | neventsw: 0
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | pid: 9240
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | pgrp: 9240
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | corecount: 8
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | event service: False
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | sizes: {0: 2348628, 1: 2348883, 12: 2348883, 23: 2348911, 33: 2348939, 44: 2348995, 55: 2349151, 66: 2349179, 76: 2349207, 87: 2349263, 90: 2349553, 98: 2349861, 1
[2025-10-13 08:42:01] 2025-10-13 06:41:12,047 | INFO     | --------------------------------------------------
[2025-10-13 08:42:01] 2025-10-13 06:41:12,048 | INFO     | 
[2025-10-13 08:42:01] 2025-10-13 06:41:12,048 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-13 08:42:01] 2025-10-13 06:41:12,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | job 6839385060 has completed (purged errors)
[2025-10-13 08:42:01] 2025-10-13 06:41:12,167 | INFO     | overall cleanup function is called
[2025-10-13 08:42:01] 2025-10-13 06:41:13,176 | INFO     | --- collectZombieJob: --- 10, [9240]
[2025-10-13 08:42:01] 2025-10-13 06:41:13,177 | INFO     | zombie collector waiting for pid 9240
[2025-10-13 08:42:01] 2025-10-13 06:41:13,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:42:01] 2025-10-13 06:41:13,177 | INFO     | collected zombie processes
[2025-10-13 08:42:01] 2025-10-13 06:41:13,177 | INFO     | will attempt to kill all subprocesses of pid=9240
[2025-10-13 08:42:01] 2025-10-13 06:41:13,322 | INFO     | process IDs to be killed: [9240] (in reverse order)
[2025-10-13 08:42:01] 2025-10-13 06:41:13,998 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:42:01] 2025-10-13 06:41:13,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:42:01] 2025-10-13 06:41:14,002 | INFO     | did not find any defunct processes belonging to 9240
[2025-10-13 08:42:01] 2025-10-13 06:41:14,005 | INFO     | did not find any defunct processes belonging to 9240
[2025-10-13 08:42:01] 2025-10-13 06:41:14,005 | INFO     | ready for new job
[2025-10-13 08:42:01] 2025-10-13 06:41:14,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:42:01] 2025-10-13 06:41:14,008 | INFO     | ***************************************
[2025-10-13 08:42:01] 2025-10-13 06:41:14,008 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:42:01] 2025-10-13 06:41:14,008 | INFO     | ***************************************
[2025-10-13 08:42:01] 2025-10-13 06:41:14,008 | INFO     | 
[2025-10-13 08:42:01] 2025-10-13 06:41:14,009 | INFO     | pilot is running in a VM
[2025-10-13 08:42:01] 2025-10-13 06:41:14,009 | INFO     | architecture information:
[2025-10-13 08:42:01] 2025-10-13 06:41:14,021 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:42:01] 2025-10-13 06:41:14,307 | INFO     | cat /etc/os-release:
[2025-10-13 08:42:01] NAME="CentOS Linux"
[2025-10-13 08:42:01] VERSION="7 (Core)"
[2025-10-13 08:42:01] ID="centos"
[2025-10-13 08:42:01] ID_LIKE="rhel fedora"
[2025-10-13 08:42:01] VERSION_ID="7"
[2025-10-13 08:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:42:01] ANSI_COLOR="0;31"
[2025-10-13 08:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:42:01] HOME_URL="https://www.centos.org/"
[2025-10-13 08:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:42:01] 
[2025-10-13 08:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:42:01] 
[2025-10-13 08:42:01] 2025-10-13 06:41:14,308 | INFO     | ***************************************
[2025-10-13 08:42:01] 2025-10-13 06:41:14,811 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-13 08:42:01] 2025-10-13 06:41:15,052 | INFO     | sufficient remaining disk space (495538143232 B)
[2025-10-13 08:42:01] 2025-10-13 06:41:15,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:42:01] 2025-10-13 06:41:15,053 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:42:01] 2025-10-13 06:41:15,053 | INFO     | update_server=False
[2025-10-13 08:42:01] 2025-10-13 06:41:15,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:42:01] 2025-10-13 06:41:15,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:42:01] 2025-10-13 06:41:15,060 | INFO     | aborting loop
[2025-10-13 08:42:01] 2025-10-13 06:41:15,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:42:01] 2025-10-13 06:41:15,283 | INFO     | all data control threads have been joined
[2025-10-13 08:42:01] 2025-10-13 06:41:15,547 | INFO     | all job control threads have been joined
[2025-10-13 08:42:01] 2025-10-13 06:41:16,060 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,066 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,267 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,290 | INFO     | [data] control thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,394 | INFO     | [job] validate thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,479 | INFO     | all payload control threads have been joined
[2025-10-13 08:42:01] 2025-10-13 06:41:16,554 | INFO     | [job] control thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,633 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:16,797 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:17,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:42:01] 2025-10-13 06:41:17,071 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:17,311 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:17,319 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:17,485 | INFO     | [payload] control thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:18,065 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:18,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:42:01] 2025-10-13 06:41:22,428 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:42:01] 2025-10-13 06:41:44,921 | INFO     | PID=2641 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 08:42:01] 2025-10-13 06:41:44,922 | INFO     | .. there are 9 such processes running
[2025-10-13 08:42:01] 2025-10-13 06:41:44,923 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:42:01] 2025-10-13 06:41:44,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:42:01] 2025-10-13 06:41:44,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:42:01] 2025-10-13 06:41:50,198 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:42:01] 2025-10-13 06:41:51,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118504695616)>', '<ExcThread(monitor, started 140117939320576)>']
[2025-10-13 08:42:01] 2025-10-13 06:41:51,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:42:01] 2025-10-13 06:41:51,966 | INFO     | [monitor] control thread has ended
[2025-10-13 08:42:01] 2025-10-13 06:41:56,833 | INFO     | all workflow threads have been joined
[2025-10-13 08:42:01] 2025-10-13 06:41:56,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:42:01] 2025-10-13 06:41:56,834 | INFO     | traces error code: 0
[2025-10-13 08:42:01] 2025-10-13 06:41:56,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:42:01] 2025-10-13 06:41:57,121 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:42:01] 2025-10-13 06:41:57,228 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:42:01] 2025-10-13 06:41:57,280 [wrapper] pilotpid: 2641
[2025-10-13 08:42:01] 2025-10-13 06:41:57,392 [wrapper] Pilot exit status: 0
[2025-10-13 08:42:01] 2025-10-13 06:41:57,891 [wrapper] pandaids: 6839385060
[2025-10-13 08:42:01] 2025-10-13 06:41:58,858 [wrapper] cleanup supervisor_pilot  3740 2642
[2025-10-13 08:42:01] 2025-10-13 06:41:58,958 [wrapper] Test setup, not cleaning
[2025-10-13 08:42:01] 2025-10-13 06:41:59,053 [wrapper] apfmon messages muted
[2025-10-13 08:42:01] 2025-10-13 06:41:59,122 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:42:01] 2025-10-13 06:41:59,180 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:42:01]  *** Error codes and diagnostics ***
[2025-10-13 08:42:01]     "exeErrorCode": 0,
[2025-10-13 08:42:01]     "exeErrorDiag": "",
[2025-10-13 08:42:01]     "pilotErrorCode": 0,
[2025-10-13 08:42:01]     "pilotErrorDiag": "",
[2025-10-13 08:42:01]  *** Listing of results directory ***
[2025-10-13 08:42:01] total 419064
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc    557409 Oct 12 05:35 pilot3.tar.gz
[2025-10-13 08:42:01] -rwx------. 1 boinc boinc     36292 Oct 12 05:58 runpilot2-wrapper.sh
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc      5112 Oct 12 05:58 queuedata.json
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc       100 Oct 13 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:42:01] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 04:17 run_atlas
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc       105 Oct 13 04:17 job.xml
[2025-10-13 08:42:01] -rw-r--r--. 2 boinc boinc 222197865 Oct 13 04:17 EVNT.46676267._003225.pool.root.1
[2025-10-13 08:42:01] -rw-r--r--. 2 boinc boinc     15120 Oct 13 04:17 start_atlas.sh
[2025-10-13 08:42:01] drwxrwx--x. 2 boinc boinc        68 Oct 13 04:17 shared
[2025-10-13 08:42:01] -rw-r--r--. 2 boinc boinc    569674 Oct 13 04:17 input.tar.gz
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc      6389 Oct 13 04:17 init_data.xml
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc         0 Oct 13 04:17 boinc_lockfile
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc      2549 Oct 13 04:17 pandaJob.out
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc    974373 Oct 13 04:21 agis_schedconf.cvmfs.json
[2025-10-13 08:42:01] drwx------. 5 boinc boinc      4096 Oct 13 04:21 pilot3
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc 197969524 Oct 13 08:38 HITS.46676269._070304.pool.root.1
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc       531 Oct 13 08:38 boinc_task_state.xml
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc      1029 Oct 13 08:39 memory_monitor_summary.json
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc   1560580 Oct 13 08:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc    457613 Oct 13 08:39 log.46676269._070304.job.log.tgz.1
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc      7779 Oct 13 08:41 heartbeat.json
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc        95 Oct 13 08:41 pilot_heartbeat.json
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc      4883 Oct 13 08:41 pilotlog.txt
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc      8192 Oct 13 08:41 boinc_mmap_file
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc        28 Oct 13 08:41 wrapper_checkpoint.txt
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc   2077131 Oct 13 08:41 log.46676269._070304.job.log.1
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc       357 Oct 13 08:42 output.list
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc       620 Oct 13 08:42 runtime_log
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc   2549760 Oct 13 08:42 result.tar.gz
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc      8703 Oct 13 08:42 runtime_log.err
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc       657 Oct 13 08:42 nhhLDmAP2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3UiNDmFWklRn.diag
[2025-10-13 08:42:01] -rw-r--r--. 1 boinc boinc     20591 Oct 13 08:42 stderr.txt
[2025-10-13 08:42:01] HITS file was successfully produced:
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc 197969524 Oct 13 08:38 shared/HITS.pool.root.1
[2025-10-13 08:42:01]  *** Contents of shared directory: ***
[2025-10-13 08:42:01] total 413392
[2025-10-13 08:42:01] -rw-r--r--. 2 boinc boinc 222197865 Oct 13 04:17 ATLAS.root_0
[2025-10-13 08:42:01] -rw-r--r--. 2 boinc boinc     15120 Oct 13 04:17 start_atlas.sh
[2025-10-13 08:42:01] -rw-r--r--. 2 boinc boinc    569674 Oct 13 04:17 input.tar.gz
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc 197969524 Oct 13 08:38 HITS.pool.root.1
[2025-10-13 08:42:01] -rw-------. 1 boinc boinc   2549760 Oct 13 08:42 result.tar.gz
08:42:03 (31250): run_atlas exited; CPU time 57766.773091
08:42:03 (31250): called boinc_finish(0)

</stderr_txt>
]]>

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