Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:25:57 (4934): wrapper (7.7.26015): starting
12:25:57 (4934): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:25:57] Arguments: --nthreads 8
[2025-10-12 12:25:57] Threads: 8
[2025-10-12 12:25:57] Checking for CVMFS
[2025-10-12 12:25:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:25:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:25:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:25:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:25:57] 2.11.2.0 2466 53107 119320 151625 0 188 18189714 18432000 1833 130560 0 48145474 99.974 2485020 28254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:25:57] CVMFS is ok
[2025-10-12 12:25:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:25:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:25:57] Further information can be found at the LHC@home message board.
[2025-10-12 12:25:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:25:57] Checking for apptainer binary...
[2025-10-12 12:25:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:25:57] Running /usr/bin/apptainer --version
[2025-10-12 12:25:57] apptainer version 1.3.2-1.el7
[2025-10-12 12:25:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:25:58] c-206-20.aglt2.org
[2025-10-12 12:25:58] apptainer works
[2025-10-12 12:25:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:25:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:25:58] Starting ATLAS job with PandaID=6840223493
[2025-10-12 12:25:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:24:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:24:33] 2025-10-12 19:23:38,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:24:33] 2025-10-12 19:23:38,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:24:33] 2025-10-12 19:23:38,381 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:24:33] 2025-10-12 19:23:38,381 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 15:24:33] 2025-10-12 19:23:38,382 | INFO     | sum of deviations: 29289300426.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,382 | INFO     | mean x: 1760291670.5
[2025-10-12 15:24:33] 2025-10-12 19:23:38,382 | INFO     | mean y: 2456431.057471264
[2025-10-12 15:24:33] 2025-10-12 19:23:38,382 | INFO     | -- intersect: -31560800354.227013
[2025-10-12 15:24:33] 2025-10-12 19:23:38,382 | INFO     | intersect: -31560800354.227013
[2025-10-12 15:24:33] 2025-10-12 19:23:38,382 | INFO     | chi2: 1.4994690913347553
[2025-10-12 15:24:33] 2025-10-12 19:23:38,383 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | sum of deviations: 28389463135.000004
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | mean x: 1760291518.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | mean y: 2455427.7869822485
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | -- intersect: -33387700289.087692
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | intersect: -33387700289.087692
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | chi2: 1.5002151011278737
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | current chi2=1.5002151011278737 (change=-0.04975159524324638 %)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,384 | INFO     | right removable region: 168
[2025-10-12 15:24:33] 2025-10-12 19:23:38,385 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,385 | INFO     | sum of deviations: 1424038839.0000007
[2025-10-12 15:24:33] 2025-10-12 19:23:38,386 | INFO     | mean x: 1760291823.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,386 | INFO     | mean y: 2487153.1301775146
[2025-10-12 15:24:33] 2025-10-12 19:23:38,386 | INFO     | -- intersect: -1672390832.1849668
[2025-10-12 15:24:33] 2025-10-12 19:23:38,386 | INFO     | intersect: -1672390832.1849668
[2025-10-12 15:24:33] 2025-10-12 19:23:38,386 | INFO     | chi2: 0.050645564400132556
[2025-10-12 15:24:33] 2025-10-12 19:23:38,386 | INFO     | current chi2=0.050645564400132556 (change=96.62243358714049 %)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,387 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,387 | INFO     | sum of deviations: -3053369762.0000005
[2025-10-12 15:24:33] 2025-10-12 19:23:38,387 | INFO     | mean x: 1760291975.5
[2025-10-12 15:24:33] 2025-10-12 19:23:38,387 | INFO     | mean y: 2492379.012195122
[2025-10-12 15:24:33] 2025-10-12 19:23:38,388 | INFO     | -- intersect: 3932290936.97041
[2025-10-12 15:24:33] 2025-10-12 19:23:38,388 | INFO     | intersect: 3932290936.97041
[2025-10-12 15:24:33] 2025-10-12 19:23:38,388 | INFO     | chi2: 0.005700609115264149
[2025-10-12 15:24:33] 2025-10-12 19:23:38,388 | INFO     | current chi2=0.005700609115264149 (change=88.74410980944813 %)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,388 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,389 | INFO     | sum of deviations: -3223360719.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,389 | INFO     | mean x: 1760292128.0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,389 | INFO     | mean y: 2492588.1886792453
[2025-10-12 15:24:33] 2025-10-12 19:23:38,389 | INFO     | -- intersect: 4554899122.741438
[2025-10-12 15:24:33] 2025-10-12 19:23:38,389 | INFO     | intersect: 4554899122.741438
[2025-10-12 15:24:33] 2025-10-12 19:23:38,390 | INFO     | chi2: 0.005359416617880277
[2025-10-12 15:24:33] 2025-10-12 19:23:38,390 | INFO     | current chi2=0.005359416617880277 (change=5.9851936957102145 %)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,390 | INFO     | left removable region: 30
[2025-10-12 15:24:33] 2025-10-12 19:23:38,391 | INFO     | sum of square deviations: 814878534.5
[2025-10-12 15:24:33] 2025-10-12 19:23:38,392 | INFO     | sum of deviations: -1447417302.5
[2025-10-12 15:24:33] 2025-10-12 19:23:38,392 | INFO     | mean x: 1760292402.5
[2025-10-12 15:24:33] 2025-10-12 19:23:38,392 | INFO     | mean y: 2490004.644927536
[2025-10-12 15:24:33] 2025-10-12 19:23:38,392 | INFO     | -- intersect: 3129186282.638239
[2025-10-12 15:24:33] 2025-10-12 19:23:38,392 | INFO     | intersect: 3129186282.638239
[2025-10-12 15:24:33] 2025-10-12 19:23:38,393 | INFO     | chi2: 0.004658283479478445
[2025-10-12 15:24:33] 2025-10-12 19:23:38,393 | INFO     | -- intersect: 3129186282.638239
[2025-10-12 15:24:33] 2025-10-12 19:23:38,393 | INFO     | current memory leak: -1.78 B/s (using 138 data points, chi2=0.00)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,394 | INFO     | could have reported an average CPU frequency of 2551 MHz (9 samples)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,394 | INFO     | ..............................
[2025-10-12 15:24:33] 2025-10-12 19:23:38,394 | INFO     | . Timing measurements:
[2025-10-12 15:24:33] 2025-10-12 19:23:38,394 | INFO     | . get job = 0 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,394 | INFO     | . initial setup = 2 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,395 | INFO     | . payload setup = 4 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,395 | INFO     | . stage-in = 0 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,395 | INFO     | . payload execution = 10615 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,395 | INFO     | . stage-out = 1 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,395 | INFO     | . log creation = 0 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,395 | INFO     | ..............................
[2025-10-12 15:24:33] 2025-10-12 19:23:38,498 | INFO     | 
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | job summary report
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | --------------------------------------------------
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | PanDA job id: 6840223493
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | task id: 46676269
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | errors: (none)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | pilot state: finished 
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | transexitcode: 0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | exeerrorcode: 0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,499 | INFO     | exeerrordiag: 
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | exitcode: 0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | exitmsg: OK
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | cpuconsumptiontime: 79179 s
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | nevents: 400
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | neventsw: 0
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | pid: 15067
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | pgrp: 15067
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | corecount: 8
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | event service: False
[2025-10-12 15:24:33] 2025-10-12 19:23:38,500 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 10624: 2378405, 10626: 2387403, 10630: 2387459, 10635: 2387717}
[2025-10-12 15:24:33] 2025-10-12 19:23:38,501 | INFO     | --------------------------------------------------
[2025-10-12 15:24:33] 2025-10-12 19:23:38,501 | INFO     | 
[2025-10-12 15:24:33] 2025-10-12 19:23:38,501 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 15:24:33] 2025-10-12 19:23:38,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:24:33] 2025-10-12 19:23:38,518 | INFO     | job 6840223493 has completed (purged errors)
[2025-10-12 15:24:33] 2025-10-12 19:23:38,518 | INFO     | overall cleanup function is called
[2025-10-12 15:24:33] 2025-10-12 19:23:39,525 | INFO     | --- collectZombieJob: --- 10, [15067]
[2025-10-12 15:24:33] 2025-10-12 19:23:39,525 | INFO     | zombie collector waiting for pid 15067
[2025-10-12 15:24:33] 2025-10-12 19:23:39,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:24:33] 2025-10-12 19:23:39,525 | INFO     | collected zombie processes
[2025-10-12 15:24:33] 2025-10-12 19:23:39,525 | INFO     | will attempt to kill all subprocesses of pid=15067
[2025-10-12 15:24:33] 2025-10-12 19:23:39,689 | INFO     | process IDs to be killed: [15067] (in reverse order)
[2025-10-12 15:24:33] 2025-10-12 19:23:39,746 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:24:33] 2025-10-12 19:23:39,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:24:33] 2025-10-12 19:23:39,752 | INFO     | did not find any defunct processes belonging to 15067
[2025-10-12 15:24:33] 2025-10-12 19:23:39,757 | INFO     | did not find any defunct processes belonging to 15067
[2025-10-12 15:24:33] 2025-10-12 19:23:39,757 | INFO     | ready for new job
[2025-10-12 15:24:33] 2025-10-12 19:23:39,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:24:33] 2025-10-12 19:23:39,759 | INFO     | ***************************************
[2025-10-12 15:24:33] 2025-10-12 19:23:39,759 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:24:33] 2025-10-12 19:23:39,759 | INFO     | ***************************************
[2025-10-12 15:24:33] 2025-10-12 19:23:39,759 | INFO     | 
[2025-10-12 15:24:33] 2025-10-12 19:23:39,761 | INFO     | architecture information:
[2025-10-12 15:24:33] 2025-10-12 19:23:39,761 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:24:33] 2025-10-12 19:23:39,774 | INFO     | cat /etc/os-release:
[2025-10-12 15:24:33] NAME="CentOS Linux"
[2025-10-12 15:24:33] VERSION="7 (Core)"
[2025-10-12 15:24:33] ID="centos"
[2025-10-12 15:24:33] ID_LIKE="rhel fedora"
[2025-10-12 15:24:33] VERSION_ID="7"
[2025-10-12 15:24:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:24:33] ANSI_COLOR="0;31"
[2025-10-12 15:24:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:24:33] HOME_URL="https://www.centos.org/"
[2025-10-12 15:24:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:24:33] 
[2025-10-12 15:24:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:24:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:24:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:24:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:24:33] 
[2025-10-12 15:24:33] 2025-10-12 19:23:39,774 | INFO     | ***************************************
[2025-10-12 15:24:33] 2025-10-12 19:23:40,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 15:24:33] 2025-10-12 19:23:40,356 | INFO     | sufficient remaining disk space (28279046144 B)
[2025-10-12 15:24:33] 2025-10-12 19:23:40,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:24:33] 2025-10-12 19:23:40,356 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:24:33] 2025-10-12 19:23:40,356 | INFO     | update_server=False
[2025-10-12 15:24:33] 2025-10-12 19:23:40,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:24:33] 2025-10-12 19:23:40,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:24:33] 2025-10-12 19:23:40,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:24:33] 2025-10-12 19:23:40,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:24:33] 2025-10-12 19:23:40,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:24:33] 2025-10-12 19:23:40,358 | INFO     | aborting loop
[2025-10-12 15:24:33] 2025-10-12 19:23:40,513 | INFO     | all job control threads have been joined
[2025-10-12 15:24:33] 2025-10-12 19:23:40,822 | INFO     | all payload control threads have been joined
[2025-10-12 15:24:33] 2025-10-12 19:23:41,358 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:41,359 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:41,363 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:41,375 | INFO     | all data control threads have been joined
[2025-10-12 15:24:33] 2025-10-12 19:23:41,518 | INFO     | [job] control thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:41,809 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:41,828 | INFO     | [payload] control thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:41,938 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,153 | INFO     | [job] validate thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,242 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,288 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,307 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,364 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,381 | INFO     | [data] control thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:42,470 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:44,365 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:23:51,130 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:24:33] 2025-10-12 19:23:52,136 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:24:33] 2025-10-12 19:24:10,255 | INFO     | PID=8689 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 15:24:33] 2025-10-12 19:24:10,255 | INFO     | .. there are 3 such processes running
[2025-10-12 15:24:33] 2025-10-12 19:24:10,256 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:24:33] 2025-10-12 19:24:10,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:24:33] 2025-10-12 19:24:10,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:24:33] 2025-10-12 19:24:26,010 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:24:33] 2025-10-12 19:24:28,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861087536960)>', '<ExcThread(monitor, started 139860358715136)>']
[2025-10-12 15:24:33] 2025-10-12 19:24:28,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:24:33] 2025-10-12 19:24:28,346 | INFO     | [monitor] control thread has ended
[2025-10-12 15:24:33] 2025-10-12 19:24:33,022 | INFO     | all workflow threads have been joined
[2025-10-12 15:24:33] 2025-10-12 19:24:33,022 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:24:33] 2025-10-12 19:24:33,022 | INFO     | traces error code: 0
[2025-10-12 15:24:33] 2025-10-12 19:24:33,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:24:33] 2025-10-12 19:24:33,144 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:24:33] 2025-10-12 19:24:33,146 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:24:33] 2025-10-12 19:24:33,148 [wrapper] pilotpid: 8689
[2025-10-12 15:24:33] 2025-10-12 19:24:33,150 [wrapper] Pilot exit status: 0
[2025-10-12 15:24:33] 2025-10-12 19:24:33,160 [wrapper] pandaids: 6840223493
[2025-10-12 15:24:33] 2025-10-12 19:24:33,200 [wrapper] cleanup supervisor_pilot 17362 8690
[2025-10-12 15:24:33] 2025-10-12 19:24:33,203 [wrapper] Test setup, not cleaning
[2025-10-12 15:24:33] 2025-10-12 19:24:33,205 [wrapper] apfmon messages muted
[2025-10-12 15:24:33] 2025-10-12 19:24:33,208 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:24:33] 2025-10-12 19:24:33,210 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:24:33]  *** Error codes and diagnostics ***
[2025-10-12 15:24:33]     "exeErrorCode": 0,
[2025-10-12 15:24:33]     "exeErrorDiag": "",
[2025-10-12 15:24:33]     "pilotErrorCode": 0,
[2025-10-12 15:24:33]     "pilotErrorDiag": "",
[2025-10-12 15:24:33]  *** Listing of results directory ***
[2025-10-12 15:24:33] total 404980
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 15:24:33] -rwx------ 1 boincer umatlas     36292 Oct 12 11:05 runpilot2-wrapper.sh
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 11:05 queuedata.json
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:24:33] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:25 run_atlas
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:25 job.xml
[2025-10-12 15:24:33] -rw-r--r-- 2 boincer umatlas 218766848 Oct 12 12:25 EVNT.46676267._004546.pool.root.1
[2025-10-12 15:24:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:25 start_atlas.sh
[2025-10-12 15:24:33] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:25 shared
[2025-10-12 15:24:33] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 12:25 input.tar.gz
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:25 boinc_lockfile
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 12:25 pandaJob.out
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas    975528 Oct 12 12:26 agis_schedconf.cvmfs.json
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas   1560580 Oct 12 12:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:24:33] drwx------ 5 boincer umatlas      4096 Oct 12 12:26 pilot3
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 15:22 init_data.xml
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas 188195119 Oct 12 15:22 HITS.46676269._081602.pool.root.1
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:23 boinc_task_state.xml
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas      1054 Oct 12 15:23 memory_monitor_summary.json
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas    417997 Oct 12 15:23 log.46676269._081602.job.log.tgz.1
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas      7860 Oct 12 15:23 heartbeat.json
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas        95 Oct 12 15:24 pilot_heartbeat.json
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:24 boinc_mmap_file
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:24 wrapper_checkpoint.txt
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas      4892 Oct 12 15:24 pilotlog.txt
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas   1498077 Oct 12 15:24 log.46676269._081602.job.log.1
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas       357 Oct 12 15:24 output.list
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:24 runtime_log
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas   1935360 Oct 12 15:24 result.tar.gz
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 15:24 runtime_log.err
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas       661 Oct 12 15:24 FW9NDmSoCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYCUMDmUBr2ln.diag
[2025-10-12 15:24:33] -rw-r--r-- 1 boincer umatlas     20888 Oct 12 15:24 stderr.txt
[2025-10-12 15:24:33] HITS file was successfully produced:
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas 188195119 Oct 12 15:22 shared/HITS.pool.root.1
[2025-10-12 15:24:33]  *** Contents of shared directory: ***
[2025-10-12 15:24:33] total 399900
[2025-10-12 15:24:33] -rw-r--r-- 2 boincer umatlas 218766848 Oct 12 12:25 ATLAS.root_0
[2025-10-12 15:24:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:25 start_atlas.sh
[2025-10-12 15:24:33] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 12:25 input.tar.gz
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas 188195119 Oct 12 15:22 HITS.pool.root.1
[2025-10-12 15:24:33] -rw------- 1 boincer umatlas   1935360 Oct 12 15:24 result.tar.gz
15:24:35 (4934): run_atlas exited; CPU time 79307.575081
15:24:35 (4934): called boinc_finish(0)

</stderr_txt>
]]>

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