Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:14:34 (509606): wrapper (7.7.26015): starting
22:14:34 (509606): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 22:14:34] Arguments: --nthreads 12
[2025-10-12 22:14:34] Threads: 12
[2025-10-12 22:14:34] Checking for CVMFS
[2025-10-12 22:14:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:14:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:14:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:14:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:14:34] 2.13.1.0 4007501 1540 74132 151635 2 57 3312719 4097025 0 130560 0 1813972 99.994 56042 4479 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 22:14:34] CVMFS is ok
[2025-10-12 22:14:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:14:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:14:34] Further information can be found at the LHC@home message board.
[2025-10-12 22:14:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:14:34] Checking for apptainer binary...
[2025-10-12 22:14:34] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 22:14:34] apptainer is not installed, using version from CVMFS
[2025-10-12 22:14:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:14:35] pckelar6.cern.ch
[2025-10-12 22:14:35] apptainer works
[2025-10-12 22:14:35] Set ATHENA_PROC_NUMBER=12
[2025-10-12 22:14:35] Set ATHENA_CORE_NUMBER=12
[2025-10-12 22:14:35] Starting ATLAS job with PandaID=6839989293
[2025-10-12 22:14:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:27:55]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:27:55] 2025-10-12 21:26:48,884 | INFO     | adding to output.list: log.46676269._078666.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/8e/log.46676269._078666.job.log.tg
[2025-10-12 23:27:55] 2025-10-12 21:26:48,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:27:55] 2025-10-12 21:26:48,885 | INFO     | summary of transferred files:
[2025-10-12 23:27:55] 2025-10-12 21:26:48,885 | INFO     |  -- lfn=log.46676269._078666.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:27:55] 2025-10-12 21:26:48,885 | INFO     | stage-out finished correctly
[2025-10-12 23:27:55] 2025-10-12 21:26:49,582 | INFO     | time since job start (4327s) is within the limit (172800.0s)
[2025-10-12 23:27:55] 2025-10-12 21:26:51,588 | INFO     | time since job start (4329s) is within the limit (172800.0s)
[2025-10-12 23:27:55] 2025-10-12 21:26:52,118 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:27:55] 2025-10-12 21:26:52,182 | INFO     | job 6839989293 has state=finished
[2025-10-12 23:27:55] 2025-10-12 21:26:52,183 | INFO     | preparing for final server update for job 6839989293 in state='finished'
[2025-10-12 23:27:55] 2025-10-12 21:26:52,183 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:27:55] 2025-10-12 21:26:52,183 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:27:55] 2025-10-12 21:26:52,183 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:27:55] 2025-10-12 21:26:52,183 | INFO     | job 6839989293 has finished - writing final server update
[2025-10-12 23:27:55] 2025-10-12 21:26:52,184 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:27:55] 2025-10-12 21:26:52,185 | INFO     | executing command: lscpu
[2025-10-12 23:27:55] 2025-10-12 21:26:52,207 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:27:55] 2025-10-12 21:26:53,593 | INFO     | time since job start (4331s) is within the limit (172800.0s)
[2025-10-12 23:27:55] 2025-10-12 21:26:55,069 | WARNING  | process 520753 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:27:55] 2025-10-12 21:26:55,069 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839989293/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:27:55] 2025-10-12 21:26:55,070 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839989293/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:27:55] 2025-10-12 21:26:55,071 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 23:27:55] 2025-10-12 21:26:55,071 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 23:27:55] 2025-10-12 21:26:55,071 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4120689 B
[2025-10-12 23:27:55] 2025-10-12 21:26:55,071 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16020 B
[2025-10-12 23:27:55] 2025-10-12 21:26:55,071 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 23:27:55] 2025-10-12 21:26:55,598 | INFO     | time since job start (4333s) is within the limit (172800.0s)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,121 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 23:27:55] 2025-10-12 21:26:57,127 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1961.583166666667
[2025-10-12 23:27:55] 2025-10-12 21:26:57,129 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839989293/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,129 | INFO     | extracted standard info from prmon json
[2025-10-12 23:27:55] 2025-10-12 21:26:57,130 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:27:55] 2025-10-12 21:26:57,130 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:27:55] 2025-10-12 21:26:57,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:27:55] 2025-10-12 21:26:57,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | sum of deviations: -699944927.0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | mean x: 1760302332.5
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | mean y: 2864664.125
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | -- intersect: 15164248075.813267
[2025-10-12 23:27:55] 2025-10-12 21:26:57,132 | INFO     | intersect: 15164248075.813267
[2025-10-12 23:27:55] 2025-10-12 21:26:57,133 | INFO     | chi2: 0.017497924988906576
[2025-10-12 23:27:55] 2025-10-12 21:26:57,133 | INFO     | -- intersect: 15164248075.813267
[2025-10-12 23:27:55] 2025-10-12 21:26:57,133 | INFO     | current memory leak: -8.61 B/s (using 64 data points, chi2=0.02)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,133 | INFO     | could have reported an average CPU frequency of 2566 MHz (6 samples)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,133 | INFO     | ..............................
[2025-10-12 23:27:55] 2025-10-12 21:26:57,133 | INFO     | . Timing measurements:
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . get job = 0 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . initial setup = 1 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . payload setup = 6 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . stage-in = 0 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . payload execution = 4302 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . stage-out = 0 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | . log creation = 0 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,134 | INFO     | ..............................
[2025-10-12 23:27:55] 2025-10-12 21:26:57,135 | INFO     | sufficient remaining disk space (870065373184 B)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,151 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,205 | INFO     | 
[2025-10-12 23:27:55] 2025-10-12 21:26:57,205 | INFO     | job summary report
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | --------------------------------------------------
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | PanDA job id: 6839989293
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | task id: 46676269
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | errors: (none)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | pilot state: finished 
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | transexitcode: 0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | exeerrorcode: 0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,206 | INFO     | exeerrordiag: 
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | exitcode: 0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | exitmsg: OK
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | cpuconsumptiontime: 45980 s
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | nevents: 400
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | neventsw: 0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | pid: 520753
[2025-10-12 23:27:55] 2025-10-12 21:26:57,207 | INFO     | pgrp: 520753
[2025-10-12 23:27:55] 2025-10-12 21:26:57,208 | INFO     | corecount: 12
[2025-10-12 23:27:55] 2025-10-12 21:26:57,208 | INFO     | event service: False
[2025-10-12 23:27:55] 2025-10-12 21:26:57,208 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 4312: 2375273, 4313: 2384271, 4316: 2384327, 4321: 2384649}
[2025-10-12 23:27:55] 2025-10-12 21:26:57,208 | INFO     | --------------------------------------------------
[2025-10-12 23:27:55] 2025-10-12 21:26:57,208 | INFO     | 
[2025-10-12 23:27:55] 2025-10-12 21:26:57,208 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 23:27:55] 2025-10-12 21:26:57,212 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6839989293: 4414429 B (within 2537553920 B limit)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,212 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6839989293/HITS.46676269._078666.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,213 | INFO     | total size of present files: 0 B (workdir size: 4414429 B)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,213 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6839989293/HITS.46676269._078666.pool.root.1 since it does not exist
[2025-10-12 23:27:55] 2025-10-12 21:26:57,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:27:55] 2025-10-12 21:26:57,228 | INFO     | job 6839989293 has completed (purged errors)
[2025-10-12 23:27:55] 2025-10-12 21:26:57,228 | INFO     | overall cleanup function is called
[2025-10-12 23:27:55] 2025-10-12 21:26:57,302 | INFO     | number of running child processes to parent process 520753: 1
[2025-10-12 23:27:55] 2025-10-12 21:26:57,302 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:27:55] 2025-10-12 21:26:57,302 | INFO     | aborting job monitoring since job object (job id=6839989293) has expired
[2025-10-12 23:27:55] 2025-10-12 21:26:58,236 | INFO     | --- collectZombieJob: --- 10, [520753]
[2025-10-12 23:27:55] 2025-10-12 21:26:58,236 | INFO     | zombie collector waiting for pid 520753
[2025-10-12 23:27:55] 2025-10-12 21:26:58,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:27:55] 2025-10-12 21:26:58,236 | INFO     | collected zombie processes
[2025-10-12 23:27:55] 2025-10-12 21:26:58,236 | INFO     | will attempt to kill all subprocesses of pid=520753
[2025-10-12 23:27:55] 2025-10-12 21:26:58,315 | INFO     | process IDs to be killed: [520753] (in reverse order)
[2025-10-12 23:27:55] 2025-10-12 21:26:58,353 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:27:55] 2025-10-12 21:26:58,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:27:55] 2025-10-12 21:26:58,356 | INFO     | did not find any defunct processes belonging to 520753
[2025-10-12 23:27:55] 2025-10-12 21:26:58,358 | INFO     | did not find any defunct processes belonging to 520753
[2025-10-12 23:27:55] 2025-10-12 21:26:58,358 | INFO     | ready for new job
[2025-10-12 23:27:55] 2025-10-12 21:26:58,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:27:55] 2025-10-12 21:26:58,360 | INFO     | ***************************************
[2025-10-12 23:27:55] 2025-10-12 21:26:58,360 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:27:55] 2025-10-12 21:26:58,360 | INFO     | ***************************************
[2025-10-12 23:27:55] 2025-10-12 21:26:58,360 | INFO     | 
[2025-10-12 23:27:55] 2025-10-12 21:26:58,360 | INFO     | architecture information:
[2025-10-12 23:27:55] 2025-10-12 21:26:58,361 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:27:55] 2025-10-12 21:26:58,372 | INFO     | cat /etc/os-release:
[2025-10-12 23:27:55] NAME="CentOS Linux"
[2025-10-12 23:27:55] VERSION="7 (Core)"
[2025-10-12 23:27:55] ID="centos"
[2025-10-12 23:27:55] ID_LIKE="rhel fedora"
[2025-10-12 23:27:55] VERSION_ID="7"
[2025-10-12 23:27:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:27:55] ANSI_COLOR="0;31"
[2025-10-12 23:27:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:27:55] HOME_URL="https://www.centos.org/"
[2025-10-12 23:27:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:27:55] 
[2025-10-12 23:27:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:27:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:27:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:27:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:27:55] 
[2025-10-12 23:27:55] 2025-10-12 21:26:58,373 | INFO     | ***************************************
[2025-10-12 23:27:55] 2025-10-12 21:26:58,875 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 23:27:55] 2025-10-12 21:26:58,887 | INFO     | sufficient remaining disk space (870070616064 B)
[2025-10-12 23:27:55] 2025-10-12 21:26:58,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:27:55] 2025-10-12 21:26:58,887 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:27:55] 2025-10-12 21:26:58,887 | INFO     | update_server=False
[2025-10-12 23:27:55] 2025-10-12 21:26:58,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:27:55] 2025-10-12 21:26:58,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:27:55] 2025-10-12 21:26:58,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:27:55] 2025-10-12 21:26:58,888 | INFO     | aborting loop
[2025-10-12 23:27:55] 2025-10-12 21:26:58,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:27:55] 2025-10-12 21:26:59,168 | INFO     | all payload control threads have been joined
[2025-10-12 23:27:55] 2025-10-12 21:26:59,281 | INFO     | all data control threads have been joined
[2025-10-12 23:27:55] 2025-10-12 21:26:59,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:27:55] 2025-10-12 21:26:59,893 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:26:59,894 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:26:59,894 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:00,129 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:00,169 | INFO     | [payload] control thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:00,287 | INFO     | [data] control thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:00,291 | INFO     | all job control threads have been joined
[2025-10-12 23:27:55] 2025-10-12 21:27:00,520 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:00,790 | INFO     | [job] validate thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:01,257 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:01,296 | INFO     | [job] control thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:01,314 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:01,336 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:01,411 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:01,468 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:02,893 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:09,070 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:27:55] 2025-10-12 21:27:10,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:27:55] 2025-10-12 21:27:28,790 | INFO     | PID=513377 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 23:27:55] 2025-10-12 21:27:28,790 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:27:55] 2025-10-12 21:27:28,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:27:55] 2025-10-12 21:27:28,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:27:55] 2025-10-12 21:27:48,803 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:27:55] 2025-10-12 21:27:50,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656323241792)>', '<ExcThread(monitor, started 139655492138752)>']
[2025-10-12 23:27:55] 2025-10-12 21:27:50,898 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:27:55] 2025-10-12 21:27:50,899 | INFO     | [monitor] control thread has ended
[2025-10-12 23:27:55] 2025-10-12 21:27:55,269 | INFO     | all workflow threads have been joined
[2025-10-12 23:27:55] 2025-10-12 21:27:55,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:27:55] 2025-10-12 21:27:55,270 | INFO     | traces error code: 0
[2025-10-12 23:27:55] 2025-10-12 21:27:55,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:27:55] 2025-10-12 21:27:55,348 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:27:55] 2025-10-12 21:27:55,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:27:55] 2025-10-12 21:27:55,353 [wrapper] pilotpid: 513377
[2025-10-12 23:27:55] 2025-10-12 21:27:55,356 [wrapper] Pilot exit status: 0
[2025-10-12 23:27:55] 2025-10-12 21:27:55,364 [wrapper] pandaids: 6839989293
[2025-10-12 23:27:55] 2025-10-12 21:27:55,387 [wrapper] cleanup supervisor_pilot  535361 513378
[2025-10-12 23:27:55] 2025-10-12 21:27:55,389 [wrapper] Test setup, not cleaning
[2025-10-12 23:27:55] 2025-10-12 21:27:55,391 [wrapper] apfmon messages muted
[2025-10-12 23:27:55] 2025-10-12 21:27:55,394 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:27:55] 2025-10-12 21:27:55,396 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:27:55]  *** Error codes and diagnostics ***
[2025-10-12 23:27:55]     "exeErrorCode": 0,
[2025-10-12 23:27:55]     "exeErrorDiag": "",
[2025-10-12 23:27:55]     "pilotErrorCode": 0,
[2025-10-12 23:27:55]     "pilotErrorDiag": "",
[2025-10-12 23:27:55]  *** Listing of results directory ***
[2025-10-12 23:27:55] total 413852
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:50 queuedata.json
[2025-10-12 23:27:55] -rwx------. 1 boinc boinc     36292 Oct 12 14:51 runpilot2-wrapper.sh
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc       100 Oct 12 22:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:27:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 22:14 run_atlas
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc       105 Oct 12 22:14 job.xml
[2025-10-12 23:27:55] -rw-r--r--. 2 boinc boinc 218485864 Oct 12 22:14 EVNT.46676267._003819.pool.root.1
[2025-10-12 23:27:55] -rw-r--r--. 2 boinc boinc     15120 Oct 12 22:14 start_atlas.sh
[2025-10-12 23:27:55] drwxrwx--x. 2 boinc boinc        68 Oct 12 22:14 shared
[2025-10-12 23:27:55] -rw-r--r--. 2 boinc boinc    569679 Oct 12 22:14 input.tar.gz
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc      6291 Oct 12 22:14 init_data.xml
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc         0 Oct 12 22:14 boinc_lockfile
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc      2550 Oct 12 22:14 pandaJob.out
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc    975536 Oct 12 22:14 agis_schedconf.cvmfs.json
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc   1560580 Oct 12 22:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:27:55] drwx------. 5 boinc boinc      4096 Oct 12 22:14 pilot3
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc 199379473 Oct 12 23:26 HITS.46676269._078666.pool.root.1
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc        95 Oct 12 23:26 pilot_heartbeat.json
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc       529 Oct 12 23:26 boinc_task_state.xml
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc      1019 Oct 12 23:26 memory_monitor_summary.json
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc    378274 Oct 12 23:26 log.46676269._078666.job.log.tgz.1
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc      7789 Oct 12 23:26 heartbeat.json
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc      8192 Oct 12 23:27 boinc_mmap_file
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc        27 Oct 12 23:27 wrapper_checkpoint.txt
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc      4820 Oct 12 23:27 pilotlog.txt
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc    632382 Oct 12 23:27 log.46676269._078666.job.log.1
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc       357 Oct 12 23:27 output.list
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc       620 Oct 12 23:27 runtime_log
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc   1034240 Oct 12 23:27 result.tar.gz
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc      8727 Oct 12 23:27 runtime_log.err
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc       657 Oct 12 23:27 km4KDm2iAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0sjNDmIXBYNm.diag
[2025-10-12 23:27:55] -rw-r--r--. 1 boinc boinc     22600 Oct 12 23:27 stderr.txt
[2025-10-12 23:27:55] HITS file was successfully produced:
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc 199379473 Oct 12 23:26 shared/HITS.pool.root.1
[2025-10-12 23:27:55]  *** Contents of shared directory: ***
[2025-10-12 23:27:55] total 409664
[2025-10-12 23:27:55] -rw-r--r--. 2 boinc boinc 218485864 Oct 12 22:14 ATLAS.root_0
[2025-10-12 23:27:55] -rw-r--r--. 2 boinc boinc     15120 Oct 12 22:14 start_atlas.sh
[2025-10-12 23:27:55] -rw-r--r--. 2 boinc boinc    569679 Oct 12 22:14 input.tar.gz
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc 199379473 Oct 12 23:26 HITS.pool.root.1
[2025-10-12 23:27:55] -rw-------. 1 boinc boinc   1034240 Oct 12 23:27 result.tar.gz
23:27:56 (509606): run_atlas exited; CPU time 45996.903966
23:27:56 (509606): called boinc_finish(0)

</stderr_txt>
]]>

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