Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:02:08 (478183): wrapper (7.7.26015): starting
21:02:08 (478183): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 21:02:08] Arguments: --nthreads 12
[2025-10-12 21:02:08] Threads: 12
[2025-10-12 21:02:08] Checking for CVMFS
[2025-10-12 21:02:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:02:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:02:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:02:09] 2.13.1.0 4007501 1468 70284 151633 2 57 3305303 4097024 0 130560 0 1731495 99.994 53379 4366 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 21:02:09] CVMFS is ok
[2025-10-12 21:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:02:09] Further information can be found at the LHC@home message board.
[2025-10-12 21:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:02:09] Checking for apptainer binary...
[2025-10-12 21:02:09] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 21:02:09] apptainer is not installed, using version from CVMFS
[2025-10-12 21:02:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:02:09] pckelar6.cern.ch
[2025-10-12 21:02:09] apptainer works
[2025-10-12 21:02:09] Set ATHENA_PROC_NUMBER=12
[2025-10-12 21:02:09] Set ATHENA_CORE_NUMBER=12
[2025-10-12 21:02:09] Starting ATLAS job with PandaID=6839318531
[2025-10-12 21:02:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:14:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:14:29]  storage_token=
[2025-10-12 22:14:29]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6839318531/log.46676269._069952.job.log.tgz.1
[2025-10-12 22:14:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/ee/log.46676269._069952.job.log.tgz.1
[2025-10-12 22:14:29]  workdir=None
[2025-10-12 22:14:29] ]
[2025-10-12 22:14:29] 2025-10-12 20:13:15,552 | INFO     | transferring file log.46676269._069952.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6839318531/log.46676269._069952.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 22:14:29] 2025-10-12 20:13:15,553 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6839318531/log.46676269._069952.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._069952.job
[2025-10-12 22:14:29] 2025-10-12 20:13:15,567 | INFO     | adding to output.list: log.46676269._069952.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/ee/log.46676269._069952.job.log.tg
[2025-10-12 22:14:29] 2025-10-12 20:13:15,567 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:14:29] 2025-10-12 20:13:15,568 | INFO     | summary of transferred files:
[2025-10-12 22:14:29] 2025-10-12 20:13:15,568 | INFO     |  -- lfn=log.46676269._069952.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:14:29] 2025-10-12 20:13:15,568 | INFO     | stage-out finished correctly
[2025-10-12 22:14:29] 2025-10-12 20:13:15,634 | INFO     | time since job start (4259s) is within the limit (172800.0s)
[2025-10-12 22:14:29] 2025-10-12 20:13:16,862 | INFO     | monitor loop #316: job 0:6839318531 is in state 'finished'
[2025-10-12 22:14:29] 2025-10-12 20:13:16,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:14:29] 2025-10-12 20:13:17,640 | INFO     | time since job start (4261s) is within the limit (172800.0s)
[2025-10-12 22:14:29] 2025-10-12 20:13:18,775 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:14:29] 2025-10-12 20:13:19,365 | INFO     | monitor loop #317: job 0:6839318531 is in state 'finished'
[2025-10-12 22:14:29] 2025-10-12 20:13:19,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:14:29] 2025-10-12 20:13:19,645 | INFO     | time since job start (4263s) is within the limit (172800.0s)
[2025-10-12 22:14:29] 2025-10-12 20:13:21,560 | INFO     | job 6839318531 has state=finished
[2025-10-12 22:14:29] 2025-10-12 20:13:21,561 | INFO     | preparing for final server update for job 6839318531 in state='finished'
[2025-10-12 22:14:29] 2025-10-12 20:13:21,561 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:14:29] 2025-10-12 20:13:21,561 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:14:29] 2025-10-12 20:13:21,561 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:14:29] 2025-10-12 20:13:21,561 | INFO     | job 6839318531 has finished - writing final server update
[2025-10-12 22:14:29] 2025-10-12 20:13:21,562 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:14:29] 2025-10-12 20:13:21,563 | INFO     | executing command: lscpu
[2025-10-12 22:14:29] 2025-10-12 20:13:21,582 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:14:29] 2025-10-12 20:13:21,651 | INFO     | time since job start (4265s) is within the limit (172800.0s)
[2025-10-12 22:14:29] 2025-10-12 20:13:21,868 | INFO     | monitor loop #318: job 0:6839318531 is in state 'finished'
[2025-10-12 22:14:29] 2025-10-12 20:13:21,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:14:29] 2025-10-12 20:13:23,656 | INFO     | time since job start (4267s) is within the limit (172800.0s)
[2025-10-12 22:14:29] 2025-10-12 20:13:24,371 | INFO     | monitor loop #319: job 0:6839318531 is in state 'finished'
[2025-10-12 22:14:29] 2025-10-12 20:13:24,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:14:29] 2025-10-12 20:13:25,657 | INFO     | time since job start (4269s) is within the limit (172800.0s)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,146 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:14:29] 2025-10-12 20:13:26,148 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2809.6353333333336
[2025-10-12 22:14:29] 2025-10-12 20:13:26,150 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839318531/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,151 | INFO     | extracted standard info from prmon json
[2025-10-12 22:14:29] 2025-10-12 20:13:26,151 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:14:29] 2025-10-12 20:13:26,151 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:14:29] 2025-10-12 20:13:26,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:14:29] 2025-10-12 20:13:26,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:14:29] 2025-10-12 20:13:26,153 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:14:29] 2025-10-12 20:13:26,153 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,153 | INFO     | sum of deviations: -6923187069.999999
[2025-10-12 22:14:29] 2025-10-12 20:13:26,153 | INFO     | mean x: 1760297957.0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,153 | INFO     | mean y: 2835009.5714285714
[2025-10-12 22:14:29] 2025-10-12 20:13:26,153 | INFO     | -- intersect: 157220598814.76755
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | intersect: 157220598814.76755
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | chi2: 0.10783753136400814
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | -- intersect: 157220598814.76755
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | current memory leak: -89.31 B/s (using 63 data points, chi2=0.11)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | could have reported an average CPU frequency of 2629 MHz (6 samples)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | ..............................
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | . Timing measurements:
[2025-10-12 22:14:29] 2025-10-12 20:13:26,154 | INFO     | . get job = 0 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | . initial setup = 1 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | . payload setup = 6 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | . stage-in = 0 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | . payload execution = 4233 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | . stage-out = 0 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | . log creation = 0 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,155 | INFO     | ..............................
[2025-10-12 22:14:29] 2025-10-12 20:13:26,583 | INFO     | 
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | job summary report
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | --------------------------------------------------
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | PanDA job id: 6839318531
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | task id: 46676269
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | errors: (none)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | pilot state: finished 
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | transexitcode: 0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | exeerrorcode: 0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | exeerrordiag: 
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | exitcode: 0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,584 | INFO     | exitmsg: OK
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | cpuconsumptiontime: 46481 s
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | nevents: 400
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | neventsw: 0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | pid: 489332
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | pgrp: 489332
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | corecount: 12
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | event service: False
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 4243: 2375177, 4244: 2384175, 4248: 2384359, 4255: 2384553}
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | --------------------------------------------------
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | 
[2025-10-12 22:14:29] 2025-10-12 20:13:26,585 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 22:14:29] 2025-10-12 20:13:26,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | job 6839318531 has completed (purged errors)
[2025-10-12 22:14:29] 2025-10-12 20:13:26,605 | INFO     | overall cleanup function is called
[2025-10-12 22:14:29] 2025-10-12 20:13:27,612 | INFO     | --- collectZombieJob: --- 10, [489332]
[2025-10-12 22:14:29] 2025-10-12 20:13:27,612 | INFO     | zombie collector waiting for pid 489332
[2025-10-12 22:14:29] 2025-10-12 20:13:27,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:14:29] 2025-10-12 20:13:27,613 | INFO     | collected zombie processes
[2025-10-12 22:14:29] 2025-10-12 20:13:27,613 | INFO     | will attempt to kill all subprocesses of pid=489332
[2025-10-12 22:14:29] 2025-10-12 20:13:27,697 | INFO     | process IDs to be killed: [489332] (in reverse order)
[2025-10-12 22:14:29] 2025-10-12 20:13:27,735 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:14:29] 2025-10-12 20:13:27,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:14:29] 2025-10-12 20:13:27,738 | INFO     | did not find any defunct processes belonging to 489332
[2025-10-12 22:14:29] 2025-10-12 20:13:27,740 | INFO     | did not find any defunct processes belonging to 489332
[2025-10-12 22:14:29] 2025-10-12 20:13:27,740 | INFO     | ready for new job
[2025-10-12 22:14:29] 2025-10-12 20:13:27,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:14:29] 2025-10-12 20:13:27,742 | INFO     | ***************************************
[2025-10-12 22:14:29] 2025-10-12 20:13:27,742 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:14:29] 2025-10-12 20:13:27,742 | INFO     | ***************************************
[2025-10-12 22:14:29] 2025-10-12 20:13:27,742 | INFO     | 
[2025-10-12 22:14:29] 2025-10-12 20:13:27,742 | INFO     | architecture information:
[2025-10-12 22:14:29] 2025-10-12 20:13:27,743 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:14:29] 2025-10-12 20:13:27,754 | INFO     | cat /etc/os-release:
[2025-10-12 22:14:29] NAME="CentOS Linux"
[2025-10-12 22:14:29] VERSION="7 (Core)"
[2025-10-12 22:14:29] ID="centos"
[2025-10-12 22:14:29] ID_LIKE="rhel fedora"
[2025-10-12 22:14:29] VERSION_ID="7"
[2025-10-12 22:14:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:14:29] ANSI_COLOR="0;31"
[2025-10-12 22:14:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:14:29] HOME_URL="https://www.centos.org/"
[2025-10-12 22:14:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:14:29] 
[2025-10-12 22:14:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:14:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:14:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:14:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:14:29] 
[2025-10-12 22:14:29] 2025-10-12 20:13:27,755 | INFO     | ***************************************
[2025-10-12 22:14:29] 2025-10-12 20:13:28,257 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 22:14:29] 2025-10-12 20:13:28,269 | INFO     | sufficient remaining disk space (870674595840 B)
[2025-10-12 22:14:29] 2025-10-12 20:13:28,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:14:29] 2025-10-12 20:13:28,269 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:14:29] 2025-10-12 20:13:28,269 | INFO     | update_server=False
[2025-10-12 22:14:29] 2025-10-12 20:13:28,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:14:29] 2025-10-12 20:13:28,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:14:29] 2025-10-12 20:13:28,270 | INFO     | aborting loop
[2025-10-12 22:14:29] 2025-10-12 20:13:28,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:14:29] 2025-10-12 20:13:28,741 | INFO     | all job control threads have been joined
[2025-10-12 22:14:29] 2025-10-12 20:13:28,744 | INFO     | all payload control threads have been joined
[2025-10-12 22:14:29] 2025-10-12 20:13:29,048 | INFO     | all data control threads have been joined
[2025-10-12 22:14:29] 2025-10-12 20:13:29,275 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,275 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,327 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:14:29] 2025-10-12 20:13:29,402 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,633 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,746 | INFO     | [job] control thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,750 | INFO     | [payload] control thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:29,954 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:30,053 | INFO     | [data] control thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:30,175 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:30,486 | INFO     | [job] validate thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:30,556 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:30,655 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:31,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:14:29] 2025-10-12 20:13:32,238 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:33,351 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:39,258 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:14:29] 2025-10-12 20:13:40,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:14:29] 2025-10-12 20:13:58,837 | INFO     | PID=481950 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:14:29] 2025-10-12 20:13:58,837 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:14:29] 2025-10-12 20:13:58,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:14:29] 2025-10-12 20:13:58,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:14:29] 2025-10-12 20:14:23,103 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:14:29] 2025-10-12 20:14:24,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365072475968)>', '<ExcThread(monitor, started 140364522432256)>']
[2025-10-12 22:14:29] 2025-10-12 20:14:24,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:14:29] 2025-10-12 20:14:24,963 | INFO     | [monitor] control thread has ended
[2025-10-12 22:14:29] 2025-10-12 20:14:29,101 | INFO     | all workflow threads have been joined
[2025-10-12 22:14:29] 2025-10-12 20:14:29,101 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:14:29] 2025-10-12 20:14:29,101 | INFO     | traces error code: 0
[2025-10-12 22:14:29] 2025-10-12 20:14:29,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:14:29] 2025-10-12 20:14:29,177 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:14:29] 2025-10-12 20:14:29,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:14:29] 2025-10-12 20:14:29,182 [wrapper] pilotpid: 481950
[2025-10-12 22:14:29] 2025-10-12 20:14:29,185 [wrapper] Pilot exit status: 0
[2025-10-12 22:14:29] 2025-10-12 20:14:29,193 [wrapper] pandaids: 6839318531
[2025-10-12 22:14:29] 2025-10-12 20:14:29,215 [wrapper] cleanup supervisor_pilot  504008 481951
[2025-10-12 22:14:29] 2025-10-12 20:14:29,217 [wrapper] Test setup, not cleaning
[2025-10-12 22:14:29] 2025-10-12 20:14:29,219 [wrapper] apfmon messages muted
[2025-10-12 22:14:29] 2025-10-12 20:14:29,221 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:14:29] 2025-10-12 20:14:29,223 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:14:29]  *** Error codes and diagnostics ***
[2025-10-12 22:14:29]     "exeErrorCode": 0,
[2025-10-12 22:14:29]     "exeErrorDiag": "",
[2025-10-12 22:14:29]     "pilotErrorCode": 0,
[2025-10-12 22:14:29]     "pilotErrorDiag": "",
[2025-10-12 22:14:29]  *** Listing of results directory ***
[2025-10-12 22:14:29] total 412724
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc    557409 Oct 12 04:56 pilot3.tar.gz
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc      5112 Oct 12 05:03 queuedata.json
[2025-10-12 22:14:29] -rwx------. 1 boinc boinc     36292 Oct 12 05:05 runpilot2-wrapper.sh
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc       100 Oct 12 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:14:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 21:02 run_atlas
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc       105 Oct 12 21:02 job.xml
[2025-10-12 22:14:29] -rw-r--r--. 2 boinc boinc 218670916 Oct 12 21:02 EVNT.46676267._003210.pool.root.1
[2025-10-12 22:14:29] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:02 start_atlas.sh
[2025-10-12 22:14:29] drwxrwx--x. 2 boinc boinc        68 Oct 12 21:02 shared
[2025-10-12 22:14:29] -rw-r--r--. 2 boinc boinc    569683 Oct 12 21:02 input.tar.gz
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc      6291 Oct 12 21:02 init_data.xml
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc         0 Oct 12 21:02 boinc_lockfile
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc      2550 Oct 12 21:02 pandaJob.out
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc    975528 Oct 12 21:02 agis_schedconf.cvmfs.json
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc   1560580 Oct 12 21:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:14:29] drwx------. 5 boinc boinc      4096 Oct 12 21:02 pilot3
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc 198055371 Oct 12 22:12 HITS.46676269._069952.pool.root.1
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc      1014 Oct 12 22:13 memory_monitor_summary.json
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc        95 Oct 12 22:13 pilot_heartbeat.json
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc       529 Oct 12 22:13 boinc_task_state.xml
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc    388025 Oct 12 22:13 log.46676269._069952.job.log.tgz.1
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc      7788 Oct 12 22:13 heartbeat.json
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc      8192 Oct 12 22:14 boinc_mmap_file
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc        27 Oct 12 22:14 wrapper_checkpoint.txt
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc      4820 Oct 12 22:14 pilotlog.txt
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc    621431 Oct 12 22:14 log.46676269._069952.job.log.1
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc       357 Oct 12 22:14 output.list
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc       620 Oct 12 22:14 runtime_log
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc   1024000 Oct 12 22:14 result.tar.gz
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc      8727 Oct 12 22:14 runtime_log.err
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc       656 Oct 12 22:14 LpiLDmCa1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyRiNDmdsgeJm.diag
[2025-10-12 22:14:29] -rw-r--r--. 1 boinc boinc     22289 Oct 12 22:14 stderr.txt
[2025-10-12 22:14:29] HITS file was successfully produced:
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc 198055371 Oct 12 22:12 shared/HITS.pool.root.1
[2025-10-12 22:14:29]  *** Contents of shared directory: ***
[2025-10-12 22:14:29] total 408540
[2025-10-12 22:14:29] -rw-r--r--. 2 boinc boinc 218670916 Oct 12 21:02 ATLAS.root_0
[2025-10-12 22:14:29] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:02 start_atlas.sh
[2025-10-12 22:14:29] -rw-r--r--. 2 boinc boinc    569683 Oct 12 21:02 input.tar.gz
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc 198055371 Oct 12 22:12 HITS.pool.root.1
[2025-10-12 22:14:29] -rw-------. 1 boinc boinc   1024000 Oct 12 22:14 result.tar.gz
22:14:30 (478183): run_atlas exited; CPU time 46510.597000
22:14:30 (478183): called boinc_finish(0)

</stderr_txt>
]]>

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