Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:13:55 (2216017): wrapper (7.7.26015): starting
13:13:55 (2216017): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 13:13:55] Arguments: --nthreads 10
[2025-10-12 13:13:55] Threads: 10
[2025-10-12 13:13:55] Checking for CVMFS
[2025-10-12 13:13:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:13:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:13:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:13:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:13:57] 2.13.2.0 1263230 129530 315732 151627 3 254 26086986 32935937 22551 16776704 0 192352012 99.585 204420020 29069 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:13:57] CVMFS is ok
[2025-10-12 13:13:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:13:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:13:57] Further information can be found at the LHC@home message board.
[2025-10-12 13:13:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:13:57] Checking for apptainer binary...
[2025-10-12 13:13:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:13:57] Running /usr/bin/apptainer --version
[2025-10-12 13:13:58] apptainer version 1.4.3-1.el9
[2025-10-12 13:13:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:13:58] c6-5-7-2.aglt2.org
[2025-10-12 13:13:58] apptainer works
[2025-10-12 13:13:58] Set ATHENA_PROC_NUMBER=10
[2025-10-12 13:13:58] Set ATHENA_CORE_NUMBER=10
[2025-10-12 13:13:58] Starting ATLAS job with PandaID=6840223530
[2025-10-12 13:13:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:18:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:18:13] 2025-10-12 20:17:39,016 | INFO     | time since job start (10973s) is within the limit (172800.0s)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,224 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 16:18:13] 2025-10-12 20:17:40,243 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2949.517446428571
[2025-10-12 16:18:13] 2025-10-12 20:17:40,255 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840223530/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,256 | INFO     | extracted standard info from prmon json
[2025-10-12 16:18:13] 2025-10-12 20:17:40,256 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:18:13] 2025-10-12 20:17:40,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:18:13] 2025-10-12 20:17:40,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:18:13] 2025-10-12 20:17:40,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:18:13] 2025-10-12 20:17:40,262 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:18:13] 2025-10-12 20:17:40,263 | INFO     | sum of square deviations: 1748629992.5224736
[2025-10-12 16:18:13] 2025-10-12 20:17:40,264 | INFO     | sum of deviations: 8383860648.151686
[2025-10-12 16:18:13] 2025-10-12 20:17:40,264 | INFO     | mean x: 1760294801.8820224
[2025-10-12 16:18:13] 2025-10-12 20:17:40,264 | INFO     | mean y: 2292251.5786516853
[2025-10-12 16:18:13] 2025-10-12 20:17:40,265 | INFO     | -- intersect: -8437495686.266057
[2025-10-12 16:18:13] 2025-10-12 20:17:40,265 | INFO     | intersect: -8437495686.266057
[2025-10-12 16:18:13] 2025-10-12 20:17:40,265 | INFO     | chi2: 2.6362101028251983
[2025-10-12 16:18:13] 2025-10-12 20:17:40,267 | INFO     | sum of square deviations: 1605382929.2716768
[2025-10-12 16:18:13] 2025-10-12 20:17:40,268 | INFO     | sum of deviations: 9629900314.976871
[2025-10-12 16:18:13] 2025-10-12 20:17:40,268 | INFO     | mean x: 1760294649.3930635
[2025-10-12 16:18:13] 2025-10-12 20:17:40,269 | INFO     | mean y: 2293555.647398844
[2025-10-12 16:18:13] 2025-10-12 20:17:40,269 | INFO     | -- intersect: -10556845755.951506
[2025-10-12 16:18:13] 2025-10-12 20:17:40,269 | INFO     | intersect: -10556845755.951506
[2025-10-12 16:18:13] 2025-10-12 20:17:40,269 | INFO     | chi2: 2.628859550218282
[2025-10-12 16:18:13] 2025-10-12 20:17:40,269 | INFO     | current chi2=2.628859550218282 (change=0.278830302601409 %)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,269 | INFO     | right removable region: 172
[2025-10-12 16:18:13] 2025-10-12 20:17:40,270 | INFO     | sum of square deviations: 1605341449.2716768
[2025-10-12 16:18:13] 2025-10-12 20:17:40,271 | INFO     | sum of deviations: -26197832144.167618
[2025-10-12 16:18:13] 2025-10-12 20:17:40,272 | INFO     | mean x: 1760294954.3930635
[2025-10-12 16:18:13] 2025-10-12 20:17:40,272 | INFO     | mean y: 2328781.6936416184
[2025-10-12 16:18:13] 2025-10-12 20:17:40,272 | INFO     | -- intersect: 28728872757.952946
[2025-10-12 16:18:13] 2025-10-12 20:17:40,272 | INFO     | intersect: 28728872757.952946
[2025-10-12 16:18:13] 2025-10-12 20:17:40,272 | INFO     | chi2: 0.5143456602836614
[2025-10-12 16:18:13] 2025-10-12 20:17:40,272 | INFO     | current chi2=0.5143456602836614 (change=80.48920077605186 %)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,273 | INFO     | sum of square deviations: 1470120674.07143
[2025-10-12 16:18:13] 2025-10-12 20:17:40,274 | INFO     | sum of deviations: -28611556387.857132
[2025-10-12 16:18:13] 2025-10-12 20:17:40,274 | INFO     | mean x: 1760295106.892857
[2025-10-12 16:18:13] 2025-10-12 20:17:40,275 | INFO     | mean y: 2331372.285714286
[2025-10-12 16:18:13] 2025-10-12 20:17:40,275 | INFO     | -- intersect: 34261275959.909996
[2025-10-12 16:18:13] 2025-10-12 20:17:40,275 | INFO     | intersect: 34261275959.909996
[2025-10-12 16:18:13] 2025-10-12 20:17:40,276 | INFO     | chi2: 0.41024779590278526
[2025-10-12 16:18:13] 2025-10-12 20:17:40,276 | INFO     | current chi2=0.41024779590278526 (change=20.23889232845207 %)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,276 | INFO     | left removable region: 20
[2025-10-12 16:18:13] 2025-10-12 20:17:40,276 | INFO     | sum of square deviations: 1088839925.86842
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | sum of deviations: -11889181305.842094
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | mean x: 1760295228.881579
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | mean y: 2314706.8421052634
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | -- intersect: 19223201662.55334
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | intersect: 19223201662.55334
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | chi2: 0.3128680467195432
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | -- intersect: 19223201662.55334
[2025-10-12 16:18:13] 2025-10-12 20:17:40,277 | INFO     | current memory leak: -10.92 B/s (using 152 data points, chi2=0.31)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,278 | INFO     | could have reported an average CPU frequency of 2757 MHz (9 samples)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,279 | INFO     | ..............................
[2025-10-12 16:18:13] 2025-10-12 20:17:40,279 | INFO     | . Timing measurements:
[2025-10-12 16:18:13] 2025-10-12 20:17:40,279 | INFO     | . get job = 0 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,279 | INFO     | . initial setup = 4 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,280 | INFO     | . payload setup = 35 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,282 | INFO     | . stage-in = 0 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,282 | INFO     | . payload execution = 10859 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,282 | INFO     | . stage-out = 2 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,282 | INFO     | . log creation = 0 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,282 | INFO     | ..............................
[2025-10-12 16:18:13] 2025-10-12 20:17:40,660 | INFO     | 
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | job summary report
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | --------------------------------------------------
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | PanDA job id: 6840223530
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | task id: 46676269
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | errors: (none)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | pilot state: finished 
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | transexitcode: 0
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | exeerrorcode: 0
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | exeerrordiag: 
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | exitcode: 0
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | exitmsg: OK
[2025-10-12 16:18:13] 2025-10-12 20:17:40,661 | INFO     | cpuconsumptiontime: 43183 s
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | nevents: 400
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | neventsw: 0
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | pid: 2235734
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | pgrp: 2235734
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | corecount: 10
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | event service: False
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | sizes: {0: 2348684, 1: 2348883, 2: 2348883, 13: 2348911, 23: 2348967, 26: 2349257, 34: 2349413, 10899: 2378388, 10902: 2387386, 10903: 2387442, 10917: 2387700}
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | --------------------------------------------------
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | 
[2025-10-12 16:18:13] 2025-10-12 20:17:40,662 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 16:18:13] 2025-10-12 20:17:40,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,749 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,749 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:18:13] 2025-10-12 20:17:40,751 | INFO     | job 6840223530 has completed (purged errors)
[2025-10-12 16:18:13] 2025-10-12 20:17:40,751 | INFO     | overall cleanup function is called
[2025-10-12 16:18:13] 2025-10-12 20:17:41,763 | INFO     | --- collectZombieJob: --- 10, [2235734]
[2025-10-12 16:18:13] 2025-10-12 20:17:41,763 | INFO     | zombie collector waiting for pid 2235734
[2025-10-12 16:18:13] 2025-10-12 20:17:41,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:18:13] 2025-10-12 20:17:41,763 | INFO     | collected zombie processes
[2025-10-12 16:18:13] 2025-10-12 20:17:41,763 | INFO     | will attempt to kill all subprocesses of pid=2235734
[2025-10-12 16:18:13] 2025-10-12 20:17:42,232 | INFO     | process IDs to be killed: [2235734] (in reverse order)
[2025-10-12 16:18:13] 2025-10-12 20:17:42,357 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:18:13] 2025-10-12 20:17:42,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:18:13] 2025-10-12 20:17:42,393 | INFO     | did not find any defunct processes belonging to 2235734
[2025-10-12 16:18:13] 2025-10-12 20:17:42,405 | INFO     | did not find any defunct processes belonging to 2235734
[2025-10-12 16:18:13] 2025-10-12 20:17:42,405 | INFO     | ready for new job
[2025-10-12 16:18:13] 2025-10-12 20:17:42,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:18:13] 2025-10-12 20:17:42,407 | INFO     | ***************************************
[2025-10-12 16:18:13] 2025-10-12 20:17:42,407 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:18:13] 2025-10-12 20:17:42,407 | INFO     | ***************************************
[2025-10-12 16:18:13] 2025-10-12 20:17:42,407 | INFO     | 
[2025-10-12 16:18:13] 2025-10-12 20:17:42,422 | INFO     | architecture information:
[2025-10-12 16:18:13] 2025-10-12 20:17:42,423 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:18:13] 2025-10-12 20:17:42,439 | INFO     | cat /etc/os-release:
[2025-10-12 16:18:13] NAME="CentOS Linux"
[2025-10-12 16:18:13] VERSION="7 (Core)"
[2025-10-12 16:18:13] ID="centos"
[2025-10-12 16:18:13] ID_LIKE="rhel fedora"
[2025-10-12 16:18:13] VERSION_ID="7"
[2025-10-12 16:18:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:18:13] ANSI_COLOR="0;31"
[2025-10-12 16:18:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:18:13] HOME_URL="https://www.centos.org/"
[2025-10-12 16:18:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:18:13] 
[2025-10-12 16:18:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:18:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:18:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:18:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:18:13] 
[2025-10-12 16:18:13] 2025-10-12 20:17:42,439 | INFO     | ***************************************
[2025-10-12 16:18:13] 2025-10-12 20:17:42,942 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 16:18:13] 2025-10-12 20:17:42,959 | INFO     | sufficient remaining disk space (75241619456 B)
[2025-10-12 16:18:13] 2025-10-12 20:17:42,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:18:13] 2025-10-12 20:17:42,960 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:18:13] 2025-10-12 20:17:42,960 | INFO     | update_server=False
[2025-10-12 16:18:13] 2025-10-12 20:17:42,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:18:13] 2025-10-12 20:17:43,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:18:13] 2025-10-12 20:17:43,303 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:18:13] 2025-10-12 20:17:43,303 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:18:13] 2025-10-12 20:17:43,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:18:13] 2025-10-12 20:17:43,303 | INFO     | will abort loop
[2025-10-12 16:18:13] 2025-10-12 20:17:43,350 | INFO     | all job control threads have been joined
[2025-10-12 16:18:13] 2025-10-12 20:17:43,454 | INFO     | all data control threads have been joined
[2025-10-12 16:18:13] 2025-10-12 20:17:43,966 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,082 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,313 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,323 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,344 | INFO     | [job] validate thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,357 | INFO     | [job] control thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,363 | INFO     | all payload control threads have been joined
[2025-10-12 16:18:13] 2025-10-12 20:17:44,461 | INFO     | [data] control thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:44,586 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:45,165 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:45,188 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:45,369 | INFO     | [payload] control thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:45,370 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:45,376 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:45,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:18:13] 2025-10-12 20:17:46,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:18:13] 2025-10-12 20:17:46,455 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:17:50,064 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:18:13] 2025-10-12 20:18:05,426 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:18:13] 2025-10-12 20:18:06,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139780941178688)>', '<ExcThread(monitor, started 139780314625792)>']
[2025-10-12 16:18:13] 2025-10-12 20:18:11,721 | INFO     | all workflow threads have been joined
[2025-10-12 16:18:13] 2025-10-12 20:18:11,722 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:18:13] 2025-10-12 20:18:11,722 | INFO     | traces error code: 0
[2025-10-12 16:18:13] 2025-10-12 20:18:11,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:18:13] 2025-10-12 20:18:12,497 | INFO     | PID=2220494 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:18:13] 2025-10-12 20:18:12,497 | INFO     | .. there are 23 such processes running
[2025-10-12 16:18:13] 2025-10-12 20:18:12,498 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:18:13] 2025-10-12 20:18:12,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:18:13] 2025-10-12 20:18:12,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:18:13] 2025-10-12 20:18:12,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:18:13] 2025-10-12 20:18:12,498 | INFO     | [monitor] control thread has ended
[2025-10-12 16:18:13] 2025-10-12 20:18:12,723 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:18:13] 2025-10-12 20:18:12,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:18:13] 2025-10-12 20:18:12,756 [wrapper] pilotpid: 2220494
[2025-10-12 16:18:13] 2025-10-12 20:18:12,767 [wrapper] Pilot exit status: 0
[2025-10-12 16:18:13] 2025-10-12 20:18:12,830 [wrapper] pandaids: 6840223530
[2025-10-12 16:18:13] 2025-10-12 20:18:12,933 [wrapper] cleanup supervisor_pilot 2924117 2220495
[2025-10-12 16:18:13] 2025-10-12 20:18:12,970 [wrapper] Test setup, not cleaning
[2025-10-12 16:18:13] 2025-10-12 20:18:12,985 [wrapper] apfmon messages muted
[2025-10-12 16:18:13] 2025-10-12 20:18:12,988 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:18:13] 2025-10-12 20:18:12,990 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:18:13]  *** Error codes and diagnostics ***
[2025-10-12 16:18:13]     "exeErrorCode": 0,
[2025-10-12 16:18:13]     "exeErrorDiag": "",
[2025-10-12 16:18:13]     "pilotErrorCode": 0,
[2025-10-12 16:18:13]     "pilotErrorDiag": "",
[2025-10-12 16:18:13]  *** Listing of results directory ***
[2025-10-12 16:18:13] total 414280
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:02 queuedata.json
[2025-10-12 16:18:13] -rwx------. 1 boincer umatlas     36292 Oct 12 11:03 runpilot2-wrapper.sh
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:18:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:13 run_atlas
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:13 job.xml
[2025-10-12 16:18:13] -rw-r--r--. 2 boincer umatlas 221855498 Oct 12 13:13 EVNT.46676267._004548.pool.root.1
[2025-10-12 16:18:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:13 shared
[2025-10-12 16:18:13] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 13:13 input.tar.gz
[2025-10-12 16:18:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:13 start_atlas.sh
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:13 boinc_lockfile
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:13 pandaJob.out
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas    975528 Oct 12 13:14 agis_schedconf.cvmfs.json
[2025-10-12 16:18:13] drwx------. 5 boincer umatlas      4096 Oct 12 13:14 pilot3
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 16:11 init_data.xml
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas 194824197 Oct 12 16:16 HITS.46676269._081639.pool.root.1
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:16 boinc_task_state.xml
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas        95 Oct 12 16:17 pilot_heartbeat.json
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas      1043 Oct 12 16:17 memory_monitor_summary.json
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas    425757 Oct 12 16:17 log.46676269._081639.job.log.tgz.1
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas      7830 Oct 12 16:17 heartbeat.json
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:18 boinc_mmap_file
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:18 wrapper_checkpoint.txt
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas       823 Oct 12 16:18 pilotlog.txt
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas   1397975 Oct 12 16:18 log.46676269._081639.job.log.1
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas       357 Oct 12 16:18 output.list
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:18 runtime_log
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas   1843200 Oct 12 16:18 result.tar.gz
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas       655 Oct 12 16:18 xYoKDmRmCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsMkNDm9m72Qn.diag
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 16:18 runtime_log.err
[2025-10-12 16:18:13] -rw-r--r--. 1 boincer umatlas     21231 Oct 12 16:18 stderr.txt
[2025-10-12 16:18:13] HITS file was successfully produced:
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas 194824197 Oct 12 16:16 shared/HITS.pool.root.1
[2025-10-12 16:18:13]  *** Contents of shared directory: ***
[2025-10-12 16:18:13] total 409296
[2025-10-12 16:18:13] -rw-r--r--. 2 boincer umatlas 221855498 Oct 12 13:13 ATLAS.root_0
[2025-10-12 16:18:13] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 13:13 input.tar.gz
[2025-10-12 16:18:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:13 start_atlas.sh
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas 194824197 Oct 12 16:16 HITS.pool.root.1
[2025-10-12 16:18:13] -rw-------. 1 boincer umatlas   1843200 Oct 12 16:18 result.tar.gz
16:18:14 (2216017): run_atlas exited; CPU time 43421.188362
16:18:14 (2216017): called boinc_finish(0)

</stderr_txt>
]]>

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