Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:07:40 (1550921): wrapper (7.7.26015): starting
14:07:40 (1550921): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:07:40] Arguments: --nthreads 8
[2025-10-12 14:07:40] Threads: 8
[2025-10-12 14:07:40] Checking for CVMFS
[2025-10-12 14:07:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:07:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:07:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:07:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:07:41] 2.13.1.0 5299 6017 110416 151631 3 17 20803710 40960001 10758 16776704 0 10249770 99.839 2436485 36423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:07:41] CVMFS is ok
[2025-10-12 14:07:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:07:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:07:41] Further information can be found at the LHC@home message board.
[2025-10-12 14:07:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:07:41] Checking for apptainer binary...
[2025-10-12 14:07:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:07:41] Running /usr/bin/apptainer --version
[2025-10-12 14:07:42] apptainer version 1.4.3-1.el9
[2025-10-12 14:07:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:07:42] c-210-33-2.aglt2.org
[2025-10-12 14:07:42] apptainer works
[2025-10-12 14:07:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:07:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:07:42] Starting ATLAS job with PandaID=6839989599
[2025-10-12 14:07:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:18:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:18:28] 2025-10-12 20:17:26,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:18:28] 2025-10-12 20:17:26,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:18:28] 2025-10-12 20:17:26,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:18:28] 2025-10-12 20:17:26,744 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:18:28] 2025-10-12 20:17:26,745 | INFO     | sum of square deviations: 635088575.4960626
[2025-10-12 16:18:28] 2025-10-12 20:17:26,746 | INFO     | sum of deviations: -15941645527.905514
[2025-10-12 16:18:28] 2025-10-12 20:17:26,746 | INFO     | mean x: 1760296379.062992
[2025-10-12 16:18:28] 2025-10-12 20:17:26,746 | INFO     | mean y: 2569237.4881889764
[2025-10-12 16:18:28] 2025-10-12 20:17:26,746 | INFO     | -- intersect: 44188564674.67393
[2025-10-12 16:18:28] 2025-10-12 20:17:26,746 | INFO     | intersect: 44188564674.67393
[2025-10-12 16:18:28] 2025-10-12 20:17:26,746 | INFO     | chi2: 2.2847790583702694
[2025-10-12 16:18:28] 2025-10-12 20:17:26,747 | INFO     | sum of square deviations: 562987337.9754107
[2025-10-12 16:18:28] 2025-10-12 20:17:26,747 | INFO     | sum of deviations: -7043911641.516408
[2025-10-12 16:18:28] 2025-10-12 20:17:26,747 | INFO     | mean x: 1760296226.5655737
[2025-10-12 16:18:28] 2025-10-12 20:17:26,748 | INFO     | mean y: 2587518.87704918
[2025-10-12 16:18:28] 2025-10-12 20:17:26,748 | INFO     | -- intersect: 22026832553.255085
[2025-10-12 16:18:28] 2025-10-12 20:17:26,756 | INFO     | intersect: 22026832553.255085
[2025-10-12 16:18:28] 2025-10-12 20:17:26,756 | INFO     | chi2: 1.6217091381448376
[2025-10-12 16:18:28] 2025-10-12 20:17:26,756 | INFO     | current chi2=1.6217091381448376 (change=29.021183374220826 %)
[2025-10-12 16:18:28] 2025-10-12 20:17:26,757 | INFO     | sum of square deviations: 496560625.4529918
[2025-10-12 16:18:28] 2025-10-12 20:17:26,757 | INFO     | sum of deviations: -6325457907.435893
[2025-10-12 16:18:28] 2025-10-12 20:17:26,757 | INFO     | mean x: 1760296074.068376
[2025-10-12 16:18:28] 2025-10-12 20:17:26,757 | INFO     | mean y: 2589169.1794871795
[2025-10-12 16:18:28] 2025-10-12 20:17:26,757 | INFO     | -- intersect: 22426192955.698925
[2025-10-12 16:18:28] 2025-10-12 20:17:26,757 | INFO     | intersect: 22426192955.698925
[2025-10-12 16:18:28] 2025-10-12 20:17:26,758 | INFO     | chi2: 1.621059816931562
[2025-10-12 16:18:28] 2025-10-12 20:17:26,758 | INFO     | current chi2=1.621059816931562 (change=0.04003931395604329 %)
[2025-10-12 16:18:28] 2025-10-12 20:17:26,758 | INFO     | right removable region: 116
[2025-10-12 16:18:28] 2025-10-12 20:17:26,758 | INFO     | sum of square deviations: 562982457.9754107
[2025-10-12 16:18:28] 2025-10-12 20:17:26,758 | INFO     | sum of deviations: -33819242624.762314
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | mean x: 1760296531.5655737
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | mean y: 2606262.5327868853
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | -- intersect: 105746390370.17877
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | intersect: 105746390370.17877
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | chi2: 0.8660717154341238
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | current chi2=0.8660717154341238 (change=62.093852696116194 %)
[2025-10-12 16:18:28] 2025-10-12 20:17:26,759 | INFO     | sum of square deviations: 496565625.69230723
[2025-10-12 16:18:28] 2025-10-12 20:17:26,795 | INFO     | sum of deviations: -31036458261.256386
[2025-10-12 16:18:28] 2025-10-12 20:17:26,795 | INFO     | mean x: 1760296684.0512822
[2025-10-12 16:18:28] 2025-10-12 20:17:26,795 | INFO     | mean y: 2599742.0427350425
[2025-10-12 16:18:28] 2025-10-12 20:17:26,796 | INFO     | -- intersect: 110025065525.52562
[2025-10-12 16:18:28] 2025-10-12 20:17:26,796 | INFO     | intersect: 110025065525.52562
[2025-10-12 16:18:28] 2025-10-12 20:17:26,796 | INFO     | chi2: 0.8529567577805227
[2025-10-12 16:18:28] 2025-10-12 20:17:26,796 | INFO     | current chi2=0.8529567577805227 (change=1.5143038872972652 %)
[2025-10-12 16:18:28] 2025-10-12 20:17:26,796 | INFO     | left removable region: 20
[2025-10-12 16:18:28] 2025-10-12 20:17:26,796 | INFO     | sum of square deviations: 274300105.90625
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | sum of deviations: -11085906402.999998
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | mean x: 1760296653.53125
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | mean y: 2593744.6666666665
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | -- intersect: 71145416960.45935
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | intersect: 71145416960.45935
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | chi2: 0.10644447719198985
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | -- intersect: 71145416960.45935
[2025-10-12 16:18:28] 2025-10-12 20:17:26,797 | INFO     | current memory leak: -40.42 B/s (using 96 data points, chi2=0.11)
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | could have reported an average CPU frequency of 2641 MHz (8 samples)
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | ..............................
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . Timing measurements:
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . get job = 0 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . initial setup = 3 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . payload setup = 13 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . stage-in = 0 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . payload execution = 7706 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . stage-out = 1 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | . log creation = 0 s
[2025-10-12 16:18:28] 2025-10-12 20:17:26,798 | INFO     | ..............................
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | 
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | job summary report
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | --------------------------------------------------
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | PanDA job id: 6839989599
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | task id: 46676269
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | errors: (none)
[2025-10-12 16:18:28] 2025-10-12 20:17:27,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | pilot state: finished 
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | transexitcode: 0
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | exeerrorcode: 0
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | exeerrordiag: 
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | exitcode: 0
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | exitmsg: OK
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | cpuconsumptiontime: 43067 s
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | nevents: 400
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | neventsw: 0
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | pid: 1561045
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | pgrp: 1561045
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | corecount: 8
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | event service: False
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | sizes: {0: 2348624, 1: 2348879, 2: 2348879, 9: 2349169, 12: 2349197, 7723: 2376974, 7724: 2386028, 7737: 2386166}
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | --------------------------------------------------
[2025-10-12 16:18:28] 2025-10-12 20:17:27,042 | INFO     | 
[2025-10-12 16:18:28] 2025-10-12 20:17:27,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:18:28] 2025-10-12 20:17:27,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:18:28] 2025-10-12 20:17:27,121 | INFO     | job 6839989599 has completed (purged errors)
[2025-10-12 16:18:28] 2025-10-12 20:17:27,121 | INFO     | overall cleanup function is called
[2025-10-12 16:18:28] 2025-10-12 20:17:28,132 | INFO     | --- collectZombieJob: --- 10, [1561045]
[2025-10-12 16:18:28] 2025-10-12 20:17:28,132 | INFO     | zombie collector waiting for pid 1561045
[2025-10-12 16:18:28] 2025-10-12 20:17:28,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:18:28] 2025-10-12 20:17:28,132 | INFO     | collected zombie processes
[2025-10-12 16:18:28] 2025-10-12 20:17:28,132 | INFO     | will attempt to kill all subprocesses of pid=1561045
[2025-10-12 16:18:28] 2025-10-12 20:17:28,424 | INFO     | process IDs to be killed: [1561045] (in reverse order)
[2025-10-12 16:18:28] 2025-10-12 20:17:28,503 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:18:28] 2025-10-12 20:17:28,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:18:28] 2025-10-12 20:17:28,512 | INFO     | did not find any defunct processes belonging to 1561045
[2025-10-12 16:18:28] 2025-10-12 20:17:28,521 | INFO     | did not find any defunct processes belonging to 1561045
[2025-10-12 16:18:28] 2025-10-12 20:17:28,521 | INFO     | ready for new job
[2025-10-12 16:18:28] 2025-10-12 20:17:28,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:18:28] 2025-10-12 20:17:28,523 | INFO     | ***************************************
[2025-10-12 16:18:28] 2025-10-12 20:17:28,523 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:18:28] 2025-10-12 20:17:28,523 | INFO     | ***************************************
[2025-10-12 16:18:28] 2025-10-12 20:17:28,523 | INFO     | 
[2025-10-12 16:18:28] 2025-10-12 20:17:28,526 | INFO     | architecture information:
[2025-10-12 16:18:28] 2025-10-12 20:17:28,527 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:18:28] 2025-10-12 20:17:28,543 | INFO     | cat /etc/os-release:
[2025-10-12 16:18:28] NAME="CentOS Linux"
[2025-10-12 16:18:28] VERSION="7 (Core)"
[2025-10-12 16:18:28] ID="centos"
[2025-10-12 16:18:28] ID_LIKE="rhel fedora"
[2025-10-12 16:18:28] VERSION_ID="7"
[2025-10-12 16:18:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:18:28] ANSI_COLOR="0;31"
[2025-10-12 16:18:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:18:28] HOME_URL="https://www.centos.org/"
[2025-10-12 16:18:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:18:28] 
[2025-10-12 16:18:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:18:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:18:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:18:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:18:28] 
[2025-10-12 16:18:28] 2025-10-12 20:17:28,543 | INFO     | ***************************************
[2025-10-12 16:18:28] 2025-10-12 20:17:29,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:18:28] 2025-10-12 20:17:29,083 | INFO     | sufficient remaining disk space (73966551040 B)
[2025-10-12 16:18:28] 2025-10-12 20:17:29,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:18:28] 2025-10-12 20:17:29,084 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:18:28] 2025-10-12 20:17:29,084 | INFO     | update_server=False
[2025-10-12 16:18:28] 2025-10-12 20:17:29,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:18:28] 2025-10-12 20:17:29,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:18:28] 2025-10-12 20:17:29,090 | INFO     | aborting loop
[2025-10-12 16:18:28] 2025-10-12 20:17:29,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:18:28] 2025-10-12 20:17:29,392 | INFO     | all data control threads have been joined
[2025-10-12 16:18:28] 2025-10-12 20:17:29,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:18:28] 2025-10-12 20:17:29,857 | INFO     | all payload control threads have been joined
[2025-10-12 16:18:28] 2025-10-12 20:17:30,091 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:30,096 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:30,203 | INFO     | all job control threads have been joined
[2025-10-12 16:18:28] 2025-10-12 20:17:30,398 | INFO     | [data] control thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:30,485 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:30,863 | INFO     | [payload] control thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:30,940 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,071 | INFO     | [job] validate thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,089 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,094 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,211 | INFO     | [job] control thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,340 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,642 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:31,747 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:32,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:18:28] 2025-10-12 20:17:33,077 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:17:33,393 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:18:28] 2025-10-12 20:18:00,051 | INFO     | PID=1554657 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:18:28] 2025-10-12 20:18:00,051 | INFO     | .. there are 10 such processes running
[2025-10-12 16:18:28] 2025-10-12 20:18:00,051 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:18:28] 2025-10-12 20:18:00,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:18:28] 2025-10-12 20:18:00,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:18:28] 2025-10-12 20:18:21,077 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:18:28] 2025-10-12 20:18:22,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865063470912)>', '<ExcThread(monitor, started 139863957415680)>']
[2025-10-12 16:18:28] 2025-10-12 20:18:23,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:18:28] 2025-10-12 20:18:23,219 | INFO     | [monitor] control thread has ended
[2025-10-12 16:18:28] 2025-10-12 20:18:27,662 | INFO     | all workflow threads have been joined
[2025-10-12 16:18:28] 2025-10-12 20:18:27,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:18:28] 2025-10-12 20:18:27,674 | INFO     | traces error code: 0
[2025-10-12 16:18:28] 2025-10-12 20:18:27,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:18:28] 2025-10-12 20:18:28,057 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:18:28] 2025-10-12 20:18:28,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:18:28] 2025-10-12 20:18:28,066 [wrapper] pilotpid: 1554657
[2025-10-12 16:18:28] 2025-10-12 20:18:28,070 [wrapper] Pilot exit status: 0
[2025-10-12 16:18:28] 2025-10-12 20:18:28,098 [wrapper] pandaids: 6839989599
[2025-10-12 16:18:28] 2025-10-12 20:18:28,149 [wrapper] cleanup supervisor_pilot 1712238 1554658
[2025-10-12 16:18:28] 2025-10-12 20:18:28,153 [wrapper] Test setup, not cleaning
[2025-10-12 16:18:28] 2025-10-12 20:18:28,156 [wrapper] apfmon messages muted
[2025-10-12 16:18:28] 2025-10-12 20:18:28,158 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:18:28] 2025-10-12 20:18:28,161 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:18:28]  *** Error codes and diagnostics ***
[2025-10-12 16:18:28]     "exeErrorCode": 0,
[2025-10-12 16:18:28]     "exeErrorDiag": "",
[2025-10-12 16:18:28]     "pilotErrorCode": 0,
[2025-10-12 16:18:28]     "pilotErrorDiag": "",
[2025-10-12 16:18:28]  *** Listing of results directory ***
[2025-10-12 16:18:28] total 420196
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:53 queuedata.json
[2025-10-12 16:18:28] -rwx------. 1 boincer umatlas     36292 Oct 12 08:54 runpilot2-wrapper.sh
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:18:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:07 run_atlas
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:07 job.xml
[2025-10-12 16:18:28] -rw-r--r--. 2 boincer umatlas 220504190 Oct 12 14:07 EVNT.46676267._003838.pool.root.1
[2025-10-12 16:18:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:07 shared
[2025-10-12 16:18:28] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 14:07 input.tar.gz
[2025-10-12 16:18:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:07 start_atlas.sh
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:07 boinc_lockfile
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 14:07 pandaJob.out
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas    975528 Oct 12 14:08 agis_schedconf.cvmfs.json
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:18:28] drwx------. 5 boincer umatlas      4096 Oct 12 14:08 pilot3
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas      6838 Oct 12 16:10 init_data.xml
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas 202974542 Oct 12 16:16 HITS.46676269._078931.pool.root.1
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:16 boinc_task_state.xml
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas      1035 Oct 12 16:17 memory_monitor_summary.json
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas    356721 Oct 12 16:17 log.46676269._078931.job.log.tgz.1
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas        95 Oct 12 16:17 pilot_heartbeat.json
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas      7818 Oct 12 16:17 heartbeat.json
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas      4824 Oct 12 16:18 pilotlog.txt
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas        27 Oct 12 16:18 wrapper_checkpoint.txt
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:18 boinc_mmap_file
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas   1092096 Oct 12 16:18 log.46676269._078931.job.log.1
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas       357 Oct 12 16:18 output.list
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:18 runtime_log
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas   1464320 Oct 12 16:18 result.tar.gz
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas      8713 Oct 12 16:18 runtime_log.err
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas       655 Oct 12 16:18 g2MLDm7lAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNwTMDmsrVXWo.diag
[2025-10-12 16:18:28] -rw-r--r--. 1 boincer umatlas     20973 Oct 12 16:18 stderr.txt
[2025-10-12 16:18:28] HITS file was successfully produced:
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas 202974542 Oct 12 16:16 shared/HITS.pool.root.1
[2025-10-12 16:18:28]  *** Contents of shared directory: ***
[2025-10-12 16:18:28] total 415572
[2025-10-12 16:18:28] -rw-r--r--. 2 boincer umatlas 220504190 Oct 12 14:07 ATLAS.root_0
[2025-10-12 16:18:28] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 14:07 input.tar.gz
[2025-10-12 16:18:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:07 start_atlas.sh
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas 202974542 Oct 12 16:16 HITS.pool.root.1
[2025-10-12 16:18:28] -rw-------. 1 boincer umatlas   1464320 Oct 12 16:18 result.tar.gz
16:18:29 (1550921): run_atlas exited; CPU time 43197.916761
16:18:29 (1550921): called boinc_finish(0)

</stderr_txt>
]]>

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