Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:42:38 (2125788): wrapper (7.7.26015): starting
22:42:38 (2125788): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 22:42:38] Arguments: --nthreads 4
[2025-10-12 22:42:38] Threads: 4
[2025-10-12 22:42:38] Checking for CVMFS
[2025-10-12 22:42:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:42:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:42:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:42:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:42:38] 2.13.2.0 428253 4850 53856 151636 3 188 2207642 4096001 1844 130560 0 15941468 99.997 292878 2368 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 22:42:38] CVMFS is ok
[2025-10-12 22:42:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:42:38] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 22:42:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 22:42:38] Further information can be found at the LHC@home message board.
[2025-10-12 22:42:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:42:38] Checking for apptainer binary...
[2025-10-12 22:42:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:42:38] Running /usr/bin/apptainer --version
[2025-10-12 22:42:38] apptainer version 1.4.2
[2025-10-12 22:42:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:42:38] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-12 22:42:38] apptainer works
[2025-10-12 22:42:38] Set ATHENA_PROC_NUMBER=4
[2025-10-12 22:42:38] Set ATHENA_CORE_NUMBER=4
[2025-10-12 22:42:38] Starting ATLAS job with PandaID=6839989736
[2025-10-12 22:42:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:08:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:08:00]  status_code=0
[2025-10-13 00:08:00]  storage_token=
[2025-10-13 00:08:00]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6839989736/log.46676269._079068.job.log.tgz.1
[2025-10-13 00:08:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/89/log.46676269._079068.job.log.tgz.1
[2025-10-13 00:08:00]  workdir=None
[2025-10-13 00:08:00] ]
[2025-10-13 00:08:00] 2025-10-12 22:05:29,990 | INFO     | transferring file log.46676269._079068.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6839989736/log.46676269._079068.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 00:08:00] 2025-10-12 22:05:29,990 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6839989736/log.46676269._079068.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-13 00:08:00] 2025-10-12 22:05:30,030 | INFO     | adding to output.list: log.46676269._079068.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/89/log.46676269._079068.job.log.tg
[2025-10-13 00:08:00] 2025-10-12 22:05:30,031 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:08:00] 2025-10-12 22:05:30,031 | INFO     | summary of transferred files:
[2025-10-13 00:08:00] 2025-10-12 22:05:30,031 | INFO     |  -- lfn=log.46676269._079068.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:08:00] 2025-10-12 22:05:30,031 | INFO     | stage-out finished correctly
[2025-10-13 00:08:00] 2025-10-12 22:05:30,295 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:08:00] 2025-10-12 22:05:30,825 | INFO     | time since job start (4964s) is within the limit (172800.0s)
[2025-10-13 00:08:00] 2025-10-12 22:05:31,218 | INFO     | job 6839989736 has state=finished
[2025-10-13 00:08:00] 2025-10-12 22:05:31,219 | INFO     | preparing for final server update for job 6839989736 in state='finished'
[2025-10-13 00:08:00] 2025-10-12 22:05:31,219 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:08:00] 2025-10-12 22:05:31,219 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:08:00] 2025-10-12 22:05:31,219 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:08:00] 2025-10-12 22:05:31,219 | INFO     | job 6839989736 has finished - writing final server update
[2025-10-13 00:08:00] 2025-10-12 22:05:31,219 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:08:00] 2025-10-12 22:05:31,223 | INFO     | executing command: lscpu
[2025-10-13 00:08:00] 2025-10-12 22:05:31,259 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:08:00] 2025-10-12 22:05:32,830 | INFO     | time since job start (4966s) is within the limit (172800.0s)
[2025-10-13 00:08:00] 2025-10-12 22:05:33,699 | WARNING  | process 2136286 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:08:00] 2025-10-12 22:05:33,699 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6839989736/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:08:00] 2025-10-12 22:05:33,764 | INFO     | number of running child processes to parent process 2136286: 1
[2025-10-13 00:08:00] 2025-10-12 22:05:33,765 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:08:00] 2025-10-12 22:05:34,836 | INFO     | time since job start (4968s) is within the limit (172800.0s)
[2025-10-13 00:08:00] 2025-10-12 22:05:36,269 | INFO     | monitor loop #380: job 0:6839989736 is in state 'finished'
[2025-10-13 00:08:00] 2025-10-12 22:05:36,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:08:00] 2025-10-12 22:05:36,841 | INFO     | time since job start (4970s) is within the limit (172800.0s)
[2025-10-13 00:08:00] 2025-10-12 22:05:38,772 | INFO     | monitor loop #381: job 0:6839989736 is in state 'finished'
[2025-10-13 00:08:00] 2025-10-12 22:05:38,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:08:00] 2025-10-12 22:05:38,846 | INFO     | time since job start (4972s) is within the limit (172800.0s)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,189 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 00:08:00] 2025-10-12 22:05:40,192 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4634.65696875
[2025-10-13 00:08:00] 2025-10-12 22:05:40,195 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6839989736/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,195 | INFO     | extracted standard info from prmon json
[2025-10-13 00:08:00] 2025-10-12 22:05:40,195 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:08:00] 2025-10-12 22:05:40,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:08:00] 2025-10-12 22:05:40,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:08:00] 2025-10-12 22:05:40,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | sum of square deviations: 125630262.5
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | sum of deviations: -5174758923.5
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | mean x: 1760304318.5
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | mean y: 2382597.5
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | -- intersect: 72509995802.82512
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | intersect: 72509995802.82512
[2025-10-13 00:08:00] 2025-10-12 22:05:40,196 | INFO     | chi2: 0.016252133046718326
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | -- intersect: 72509995802.82512
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | current memory leak: -41.19 B/s (using 74 data points, chi2=0.02)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | could have reported an average CPU frequency of 4518 MHz (6 samples)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | ..............................
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . Timing measurements:
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . get job = 0 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . initial setup = 1 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . payload setup = 3 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . stage-in = 0 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . payload execution = 4941 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . stage-out = 0 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | . log creation = 0 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,197 | INFO     | ..............................
[2025-10-13 00:08:00] 2025-10-12 22:05:40,379 | INFO     | 
[2025-10-13 00:08:00] 2025-10-12 22:05:40,379 | INFO     | job summary report
[2025-10-13 00:08:00] 2025-10-12 22:05:40,379 | INFO     | --------------------------------------------------
[2025-10-13 00:08:00] 2025-10-12 22:05:40,379 | INFO     | PanDA job id: 6839989736
[2025-10-13 00:08:00] 2025-10-12 22:05:40,379 | INFO     | task id: 46676269
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | errors: (none)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | pilot state: finished 
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | transexitcode: 0
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | exeerrorcode: 0
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | exeerrordiag: 
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | exitcode: 0
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | exitmsg: OK
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | cpuconsumptiontime: 19136 s
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | nevents: 400
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | neventsw: 0
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | pid: 2136286
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | pgrp: 2136286
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | corecount: 4
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | event service: False
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 4949: 2375588, 4950: 2384656, 4960: 2384794}
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | --------------------------------------------------
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | 
[2025-10-13 00:08:00] 2025-10-12 22:05:40,380 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:08:00] 2025-10-12 22:05:40,418 | INFO     | job 6839989736 has completed (purged errors)
[2025-10-13 00:08:00] 2025-10-12 22:05:40,418 | INFO     | overall cleanup function is called
[2025-10-13 00:08:00] 2025-10-12 22:05:41,427 | INFO     | --- collectZombieJob: --- 10, [2136286]
[2025-10-13 00:08:00] 2025-10-12 22:05:41,427 | INFO     | zombie collector waiting for pid 2136286
[2025-10-13 00:08:00] 2025-10-12 22:05:41,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:08:00] 2025-10-12 22:05:41,427 | INFO     | collected zombie processes
[2025-10-13 00:08:00] 2025-10-12 22:05:41,427 | INFO     | will attempt to kill all subprocesses of pid=2136286
[2025-10-13 00:08:00] 2025-10-12 22:05:41,505 | INFO     | process IDs to be killed: [2136286] (in reverse order)
[2025-10-13 00:08:00] 2025-10-12 22:05:41,592 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:08:00] 2025-10-12 22:05:41,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:08:00] 2025-10-12 22:05:41,595 | INFO     | did not find any defunct processes belonging to 2136286
[2025-10-13 00:08:00] 2025-10-12 22:05:41,599 | INFO     | did not find any defunct processes belonging to 2136286
[2025-10-13 00:08:00] 2025-10-12 22:05:41,599 | INFO     | ready for new job
[2025-10-13 00:08:00] 2025-10-12 22:05:41,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:08:00] 2025-10-12 22:05:41,600 | INFO     | ***************************************
[2025-10-13 00:08:00] 2025-10-12 22:05:41,600 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:08:00] 2025-10-12 22:05:41,600 | INFO     | ***************************************
[2025-10-13 00:08:00] 2025-10-12 22:05:41,600 | INFO     | 
[2025-10-13 00:08:00] 2025-10-12 22:05:41,601 | INFO     | architecture information:
[2025-10-13 00:08:00] 2025-10-12 22:05:41,601 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:08:00] 2025-10-12 22:05:41,619 | INFO     | cat /etc/os-release:
[2025-10-13 00:08:00] NAME="CentOS Linux"
[2025-10-13 00:08:00] VERSION="7 (Core)"
[2025-10-13 00:08:00] ID="centos"
[2025-10-13 00:08:00] ID_LIKE="rhel fedora"
[2025-10-13 00:08:00] VERSION_ID="7"
[2025-10-13 00:08:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:08:00] ANSI_COLOR="0;31"
[2025-10-13 00:08:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:08:00] HOME_URL="https://www.centos.org/"
[2025-10-13 00:08:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:08:00] 
[2025-10-13 00:08:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:08:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:08:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:08:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:08:00] 
[2025-10-13 00:08:00] 2025-10-12 22:05:41,620 | INFO     | ***************************************
[2025-10-13 00:08:00] 2025-10-12 22:05:42,122 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-13 00:08:00] 2025-10-12 22:05:42,135 | INFO     | sufficient remaining disk space (1766036865024 B)
[2025-10-13 00:08:00] 2025-10-12 22:05:42,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:08:00] 2025-10-12 22:05:42,135 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:08:00] 2025-10-12 22:05:42,135 | INFO     | update_server=False
[2025-10-13 00:08:00] 2025-10-12 22:05:42,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:08:00] 2025-10-12 22:05:42,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:08:00] 2025-10-12 22:05:42,219 | INFO     | all data control threads have been joined
[2025-10-13 00:08:00] 2025-10-12 22:05:42,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:08:00] 2025-10-12 22:05:42,281 | INFO     | aborting loop
[2025-10-13 00:08:00] 2025-10-12 22:05:42,451 | INFO     | all job control threads have been joined
[2025-10-13 00:08:00] 2025-10-12 22:05:43,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:08:00] 2025-10-12 22:05:43,140 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,142 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,224 | INFO     | [data] control thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,235 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,285 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,354 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,461 | INFO     | [job] control thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:43,540 | INFO     | all payload control threads have been joined
[2025-10-13 00:08:00] 2025-10-12 22:05:43,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:44,295 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:44,340 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:44,359 | INFO     | [job] validate thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:44,506 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:44,545 | INFO     | [payload] control thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:44,546 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:45,104 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:45,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:08:00] 2025-10-12 22:05:49,354 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:08:00] 2025-10-12 22:05:54,016 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:08:00] 2025-10-12 22:05:54,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137405387048768)>', '<ExcThread(monitor, started 137404904097536)>']
[2025-10-13 00:08:00] 2025-10-12 22:05:59,686 | INFO     | all workflow threads have been joined
[2025-10-13 00:08:00] 2025-10-12 22:05:59,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:08:00] 2025-10-12 22:05:59,686 | INFO     | traces error code: 0
[2025-10-13 00:08:00] 2025-10-12 22:05:59,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | INFO     | PID=2129634 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | INFO     | .. there are 4 such processes running
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:08:00] 2025-10-12 22:06:11,991 | INFO     | [monitor] control thread has ended
[2025-10-13 00:08:00] 2025-10-12 22:06:12,056 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:08:00] 2025-10-12 22:06:12,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:08:00] 2025-10-12 22:06:12,059 [wrapper] pilotpid: 2129634
[2025-10-13 00:08:00] 2025-10-12 22:06:12,062 [wrapper] Pilot exit status: 0
[2025-10-13 00:08:00] 2025-10-12 22:06:12,093 [wrapper] pandaids: 6839989736
[2025-10-13 00:08:00] 2025-10-12 22:06:12,194 [wrapper] cleanup supervisor_pilot 2218222 2129635
[2025-10-13 00:08:00] 2025-10-12 22:06:12,207 [wrapper] Test setup, not cleaning
[2025-10-13 00:08:00] 2025-10-12 22:06:12,208 [wrapper] apfmon messages muted
[2025-10-13 00:08:00] 2025-10-12 22:06:12,210 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:08:00] 2025-10-12 22:06:12,212 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:08:00]  *** Error codes and diagnostics ***
[2025-10-13 00:08:00]     "exeErrorCode": 0,
[2025-10-13 00:08:00]     "exeErrorDiag": "",
[2025-10-13 00:08:00]     "pilotErrorCode": 0,
[2025-10-13 00:08:00]     "pilotErrorDiag": "",
[2025-10-13 00:08:00]  *** Listing of results directory ***
[2025-10-13 00:08:00] total 414932
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 00:08:00] -rwx------ 1 boinc boinc     36292 Oct 12 15:01 runpilot2-wrapper.sh
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:01 queuedata.json
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:08:00] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:42 run_atlas
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:42 job.xml
[2025-10-13 00:08:00] -rw-r--r-- 2 boinc boinc 221390215 Oct 12 22:42 EVNT.46676267._003850.pool.root.1
[2025-10-13 00:08:00] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:42 start_atlas.sh
[2025-10-13 00:08:00] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:42 shared
[2025-10-13 00:08:00] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:42 input.tar.gz
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:42 boinc_lockfile
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:42 pandaJob.out
[2025-10-13 00:08:00] -rw------- 1 boinc boinc    975536 Oct 12 22:42 agis_schedconf.cvmfs.json
[2025-10-13 00:08:00] -rw------- 1 boinc boinc   1560580 Oct 12 22:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:08:00] drwx------ 5 boinc boinc      4096 Oct 12 22:42 pilot3
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc      9520 Oct 13 00:04 init_data.xml
[2025-10-13 00:08:00] -rw------- 1 boinc boinc 197545786 Oct 13 00:05 HITS.46676269._079068.pool.root.1
[2025-10-13 00:08:00] -rw------- 1 boinc boinc        95 Oct 13 00:05 pilot_heartbeat.json
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc       529 Oct 13 00:05 boinc_task_state.xml
[2025-10-13 00:08:00] -rw------- 1 boinc boinc      1026 Oct 13 00:05 memory_monitor_summary.json
[2025-10-13 00:08:00] -rw------- 1 boinc boinc    271032 Oct 13 00:05 log.46676269._079068.job.log.tgz.1
[2025-10-13 00:08:00] -rw------- 1 boinc boinc      7784 Oct 13 00:05 heartbeat.json
[2025-10-13 00:08:00] -rw------- 1 boinc boinc       822 Oct 13 00:06 pilotlog.txt
[2025-10-13 00:08:00] -rw------- 1 boinc boinc    750092 Oct 13 00:06 log.46676269._079068.job.log.1
[2025-10-13 00:08:00] -rw------- 1 boinc boinc       357 Oct 13 00:06 output.list
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:06 runtime_log
[2025-10-13 00:08:00] -rw------- 1 boinc boinc   1044480 Oct 13 00:06 result.tar.gz
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc      8841 Oct 13 00:06 runtime_log.err
[2025-10-13 00:08:00] -rw------- 1 boinc boinc       656 Oct 13 00:06 gxTMDmBtAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyvjNDmkdXugm.diag
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:07 boinc_mmap_file
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:08 wrapper_checkpoint.txt
[2025-10-13 00:08:00] -rw-r--r-- 1 boinc boinc     22193 Oct 13 00:08 stderr.txt
[2025-10-13 00:08:00] HITS file was successfully produced:
[2025-10-13 00:08:00] -rw------- 1 boinc boinc 197545786 Oct 13 00:05 shared/HITS.pool.root.1
[2025-10-13 00:08:00]  *** Contents of shared directory: ***
[2025-10-13 00:08:00] total 410724
[2025-10-13 00:08:00] -rw-r--r-- 2 boinc boinc 221390215 Oct 12 22:42 ATLAS.root_0
[2025-10-13 00:08:00] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:42 start_atlas.sh
[2025-10-13 00:08:00] -rw-r--r-- 2 boinc boinc    569680 Oct 12 22:42 input.tar.gz
[2025-10-13 00:08:00] -rw------- 1 boinc boinc 197545786 Oct 13 00:05 HITS.pool.root.1
[2025-10-13 00:08:00] -rw------- 1 boinc boinc   1044480 Oct 13 00:06 result.tar.gz
00:08:02 (2125788): run_atlas exited; CPU time 19151.835506
00:08:02 (2125788): called boinc_finish(0)

</stderr_txt>
]]>

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