Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:46 (2108686): wrapper (7.7.26015): starting
10:16:46 (2108686): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 10:16:46] Arguments: --nthreads 4
[2025-10-13 10:16:46] Threads: 4
[2025-10-13 10:16:46] Checking for CVMFS
[2025-10-13 10:16:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:16:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:16:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:16:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:16:46] 2.9.2.0 14498 5607 100416 151653 1 57 28724388 36864000 0 130560 0 5106734 99.992 189867 682 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:16:46] CVMFS is ok
[2025-10-13 10:16:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:16:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:16:46] Further information can be found at the LHC@home message board.
[2025-10-13 10:16:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:16:46] Checking for apptainer binary...
[2025-10-13 10:16:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:16:46] Running /usr/bin/apptainer --version
[2025-10-13 10:16:46] apptainer version 1.4.1-1.1
[2025-10-13 10:16:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:16:46] thA375
[2025-10-13 10:16:46] apptainer works
[2025-10-13 10:16:46] Set ATHENA_PROC_NUMBER=4
[2025-10-13 10:16:46] Set ATHENA_CORE_NUMBER=4
[2025-10-13 10:16:46] Starting ATLAS job with PandaID=6839988531
[2025-10-13 10:16:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:28:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:28:04]  status=None
[2025-10-13 11:28:04]  status_code=0
[2025-10-13 11:28:04]  storage_token=
[2025-10-13 11:28:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839988531/log.46676269._078624.job.log.tgz.1
[2025-10-13 11:28:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/69/log.46676269._078624.job.log.tgz.1
[2025-10-13 11:28:04]  workdir=None
[2025-10-13 11:28:04] ]
[2025-10-13 11:28:04] 2025-10-13 09:27:14,639 | INFO     | transferring file log.46676269._078624.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839988531/log.46676269._078624.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 11:28:04] 2025-10-13 09:27:14,640 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839988531/log.46676269._078624.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0786
[2025-10-13 11:28:04] 2025-10-13 09:27:14,656 | INFO     | adding to output.list: log.46676269._078624.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/69/log.46676269._078624.job.log.tg
[2025-10-13 11:28:04] 2025-10-13 09:27:14,656 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:28:04] 2025-10-13 09:27:14,657 | INFO     | summary of transferred files:
[2025-10-13 11:28:04] 2025-10-13 09:27:14,657 | INFO     |  -- lfn=log.46676269._078624.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:28:04] 2025-10-13 09:27:14,657 | INFO     | stage-out finished correctly
[2025-10-13 11:28:04] 2025-10-13 09:27:14,985 | INFO     | monitor loop #326: job 0:6839988531 is in state 'finished'
[2025-10-13 11:28:04] 2025-10-13 09:27:14,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:28:04] 2025-10-13 09:27:15,059 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:28:04] 2025-10-13 09:27:16,074 | INFO     | time since job start (4223s) is within the limit (172800.0s)
[2025-10-13 11:28:04] 2025-10-13 09:27:17,484 | INFO     | job 6839988531 has state=finished
[2025-10-13 11:28:04] 2025-10-13 09:27:17,484 | INFO     | preparing for final server update for job 6839988531 in state='finished'
[2025-10-13 11:28:04] 2025-10-13 09:27:17,493 | INFO     | monitor loop #327: job 0:6839988531 is in state 'finished'
[2025-10-13 11:28:04] 2025-10-13 09:27:17,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:28:04] 2025-10-13 09:27:18,081 | INFO     | time since job start (4225s) is within the limit (172800.0s)
[2025-10-13 11:28:04] 2025-10-13 09:27:18,081 | INFO     | 4225s have passed since pilot start - server update state is 'RUNNING'
[2025-10-13 11:28:04] 2025-10-13 09:27:18,092 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 11:28:04] 2025-10-13 09:27:18,092 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:28:04] 2025-10-13 09:27:18,092 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:28:04] 2025-10-13 09:27:18,092 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:28:04] 2025-10-13 09:27:18,092 | INFO     | job 6839988531 has finished - writing final server update
[2025-10-13 11:28:04] 2025-10-13 09:27:18,092 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:28:04] 2025-10-13 09:27:18,093 | INFO     | executing command: lscpu
[2025-10-13 11:28:04] 2025-10-13 09:27:18,111 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:28:04] 2025-10-13 09:27:19,172 | INFO     | PID=2112481 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:28:04] 2025-10-13 09:27:19,996 | INFO     | monitor loop #328: job 0:6839988531 is in state 'finished'
[2025-10-13 11:28:04] 2025-10-13 09:27:19,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:28:04] 2025-10-13 09:27:20,173 | INFO     | time since job start (4227s) is within the limit (172800.0s)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,034 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:28:04] 2025-10-13 09:27:21,036 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3522.46875
[2025-10-13 11:28:04] 2025-10-13 09:27:21,037 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839988531/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,037 | INFO     | extracted standard info from prmon json
[2025-10-13 11:28:04] 2025-10-13 09:27:21,037 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:28:04] 2025-10-13 09:27:21,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:28:04] 2025-10-13 09:27:21,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | INFO     | sum of square deviations: 73882315.5
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | INFO     | sum of deviations: -2365874874.0
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | INFO     | mean x: 1760345600.5
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | INFO     | mean y: 2531655.0967741935
[2025-10-13 11:28:04] 2025-10-13 09:27:21,038 | INFO     | -- intersect: 56372684615.170044
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | intersect: 56372684615.170044
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | chi2: 0.026211588310392407
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | -- intersect: 56372684615.170044
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | current memory leak: -32.02 B/s (using 62 data points, chi2=0.03)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | could have reported an average CPU frequency of 3651 MHz (6 samples)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | ..............................
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . Timing measurements:
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . get job = 0 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . initial setup = 1 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . payload setup = 3 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . stage-in = 0 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . payload execution = 4198 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . stage-out = 0 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | . log creation = 0 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,039 | INFO     | ..............................
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | 
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | job summary report
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | --------------------------------------------------
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | PanDA job id: 6839988531
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | task id: 46676269
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | errors: (none)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | pilot state: finished 
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | transexitcode: 0
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | exeerrorcode: 0
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | exeerrordiag: 
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | exitcode: 0
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | exitmsg: OK
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | cpuconsumptiontime: 15803 s
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | nevents: 400
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | neventsw: 0
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | pid: 2119062
[2025-10-13 11:28:04] 2025-10-13 09:27:21,078 | INFO     | pgrp: 2119062
[2025-10-13 11:28:04] 2025-10-13 09:27:21,079 | INFO     | corecount: 4
[2025-10-13 11:28:04] 2025-10-13 09:27:21,079 | INFO     | event service: False
[2025-10-13 11:28:04] 2025-10-13 09:27:21,079 | INFO     | sizes: {0: 2348688, 1: 2348887, 4: 2349149, 11: 2349177, 4205: 2375366, 4206: 2375365, 4207: 2384553, 4208: 2384609, 4214: 2384803}
[2025-10-13 11:28:04] 2025-10-13 09:27:21,079 | INFO     | --------------------------------------------------
[2025-10-13 11:28:04] 2025-10-13 09:27:21,079 | INFO     | 
[2025-10-13 11:28:04] 2025-10-13 09:27:21,079 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:28:04] 2025-10-13 09:27:21,096 | INFO     | job 6839988531 has completed (purged errors)
[2025-10-13 11:28:04] 2025-10-13 09:27:21,096 | INFO     | overall cleanup function is called
[2025-10-13 11:28:04] 2025-10-13 09:27:22,102 | INFO     | --- collectZombieJob: --- 10, [2119062]
[2025-10-13 11:28:04] 2025-10-13 09:27:22,103 | INFO     | zombie collector waiting for pid 2119062
[2025-10-13 11:28:04] 2025-10-13 09:27:22,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:28:04] 2025-10-13 09:27:22,103 | INFO     | collected zombie processes
[2025-10-13 11:28:04] 2025-10-13 09:27:22,103 | INFO     | will attempt to kill all subprocesses of pid=2119062
[2025-10-13 11:28:04] 2025-10-13 09:27:22,154 | INFO     | process IDs to be killed: [2119062] (in reverse order)
[2025-10-13 11:28:04] 2025-10-13 09:27:22,188 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:28:04] 2025-10-13 09:27:22,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:28:04] 2025-10-13 09:27:22,190 | INFO     | did not find any defunct processes belonging to 2119062
[2025-10-13 11:28:04] 2025-10-13 09:27:22,192 | INFO     | did not find any defunct processes belonging to 2119062
[2025-10-13 11:28:04] 2025-10-13 09:27:22,192 | INFO     | ready for new job
[2025-10-13 11:28:04] 2025-10-13 09:27:22,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:28:04] 2025-10-13 09:27:22,193 | INFO     | ***************************************
[2025-10-13 11:28:04] 2025-10-13 09:27:22,193 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:28:04] 2025-10-13 09:27:22,193 | INFO     | ***************************************
[2025-10-13 11:28:04] 2025-10-13 09:27:22,193 | INFO     | 
[2025-10-13 11:28:04] 2025-10-13 09:27:22,193 | INFO     | architecture information:
[2025-10-13 11:28:04] 2025-10-13 09:27:22,193 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:28:04] 2025-10-13 09:27:22,205 | INFO     | cat /etc/os-release:
[2025-10-13 11:28:04] NAME="CentOS Linux"
[2025-10-13 11:28:04] VERSION="7 (Core)"
[2025-10-13 11:28:04] ID="centos"
[2025-10-13 11:28:04] ID_LIKE="rhel fedora"
[2025-10-13 11:28:04] VERSION_ID="7"
[2025-10-13 11:28:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:28:04] ANSI_COLOR="0;31"
[2025-10-13 11:28:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:28:04] HOME_URL="https://www.centos.org/"
[2025-10-13 11:28:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:28:04] 
[2025-10-13 11:28:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:28:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:28:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:28:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:28:04] 
[2025-10-13 11:28:04] 2025-10-13 09:27:22,205 | INFO     | ***************************************
[2025-10-13 11:28:04] 2025-10-13 09:27:22,708 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:28:04] 2025-10-13 09:27:22,722 | INFO     | sufficient remaining disk space (229472468992 B)
[2025-10-13 11:28:04] 2025-10-13 09:27:22,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:28:04] 2025-10-13 09:27:22,723 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:28:04] 2025-10-13 09:27:22,723 | INFO     | update_server=False
[2025-10-13 11:28:04] 2025-10-13 09:27:22,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:28:04] 2025-10-13 09:27:22,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:28:04] 2025-10-13 09:27:22,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:28:04] 2025-10-13 09:27:22,832 | INFO     | all payload control threads have been joined
[2025-10-13 11:28:04] 2025-10-13 09:27:23,022 | INFO     | all job control threads have been joined
[2025-10-13 11:28:04] 2025-10-13 09:27:23,214 | INFO     | all data control threads have been joined
[2025-10-13 11:28:04] 2025-10-13 09:27:23,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:28:04] 2025-10-13 09:27:23,505 | INFO     | aborting loop
[2025-10-13 11:28:04] 2025-10-13 09:27:23,727 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:23,728 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:23,739 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:23,838 | INFO     | [payload] control thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,027 | INFO     | [job] control thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,057 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,219 | INFO     | [data] control thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,510 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,630 | INFO     | [job] validate thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,729 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,733 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,801 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,801 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:24,818 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:25,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:28:04] 2025-10-13 09:27:29,614 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:33,562 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:28:04] 2025-10-13 09:27:34,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:28:04] 2025-10-13 09:27:53,275 | INFO     | PID=2112481 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:28:04] 2025-10-13 09:27:53,275 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:28:04] 2025-10-13 09:27:53,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:28:04] 2025-10-13 09:27:53,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:28:04] 2025-10-13 09:27:58,611 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:28:04] 2025-10-13 09:27:59,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979455473472)>', '<ExcThread(monitor, started 139978688427776)>']
[2025-10-13 11:28:04] 2025-10-13 09:28:00,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:28:04] 2025-10-13 09:28:00,311 | INFO     | [monitor] control thread has ended
[2025-10-13 11:28:04] 2025-10-13 09:28:04,623 | INFO     | all workflow threads have been joined
[2025-10-13 11:28:04] 2025-10-13 09:28:04,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:28:04] 2025-10-13 09:28:04,623 | INFO     | traces error code: 0
[2025-10-13 11:28:04] 2025-10-13 09:28:04,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:28:04] 2025-10-13 09:28:04,689 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:28:04] 2025-10-13 09:28:04,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:28:04] 2025-10-13 09:28:04,696 [wrapper] pilotpid: 2112481
[2025-10-13 11:28:04] 2025-10-13 09:28:04,699 [wrapper] Pilot exit status: 0
[2025-10-13 11:28:04] 2025-10-13 09:28:04,710 [wrapper] pandaids: 6839988531
[2025-10-13 11:28:04] 2025-10-13 09:28:04,731 [wrapper] cleanup supervisor_pilot 2131181 2112482
[2025-10-13 11:28:04] 2025-10-13 09:28:04,735 [wrapper] Test setup, not cleaning
[2025-10-13 11:28:04] 2025-10-13 09:28:04,738 [wrapper] apfmon messages muted
[2025-10-13 11:28:04] 2025-10-13 09:28:04,742 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:28:04] 2025-10-13 09:28:04,745 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:28:04]  *** Error codes and diagnostics ***
[2025-10-13 11:28:04]     "exeErrorCode": 0,
[2025-10-13 11:28:04]     "exeErrorDiag": "",
[2025-10-13 11:28:04]     "pilotErrorCode": 0,
[2025-10-13 11:28:04]     "pilotErrorDiag": "",
[2025-10-13 11:28:04]  *** Listing of results directory ***
[2025-10-13 11:28:04] total 414288
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 11:28:04] -rwx------ 1 boinc boinc     36292 Oct 12 14:50 runpilot2-wrapper.sh
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:50 queuedata.json
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:28:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:16 run_atlas
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:16 job.xml
[2025-10-13 11:28:04] -rw-r--r-- 2 boinc boinc 223250519 Oct 13 10:16 EVNT.46676267._003814.pool.root.1
[2025-10-13 11:28:04] -rw-r--r-- 2 boinc boinc    569681 Oct 13 10:16 input.tar.gz
[2025-10-13 11:28:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:16 start_atlas.sh
[2025-10-13 11:28:04] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:16 shared
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:16 boinc_setup_complete
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc      6368 Oct 13 10:16 init_data.xml
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:16 boinc_lockfile
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc      2549 Oct 13 10:16 pandaJob.out
[2025-10-13 11:28:04] -rw------- 1 boinc boinc    972849 Oct 13 10:16 agis_schedconf.cvmfs.json
[2025-10-13 11:28:04] -rw------- 1 boinc boinc   1560580 Oct 13 10:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:28:04] drwx------ 5 boinc boinc      4096 Oct 13 10:16 pilot3
[2025-10-13 11:28:04] -rw------- 1 boinc boinc 195290521 Oct 13 11:26 HITS.46676269._078624.pool.root.1
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:27 boinc_task_state.xml
[2025-10-13 11:28:04] -rw------- 1 boinc boinc      1022 Oct 13 11:27 memory_monitor_summary.json
[2025-10-13 11:28:04] -rw------- 1 boinc boinc    263375 Oct 13 11:27 log.46676269._078624.job.log.tgz.1
[2025-10-13 11:28:04] -rw------- 1 boinc boinc        95 Oct 13 11:27 pilot_heartbeat.json
[2025-10-13 11:28:04] -rw------- 1 boinc boinc      7761 Oct 13 11:27 heartbeat.json
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:27 wrapper_checkpoint.txt
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:27 boinc_mmap_file
[2025-10-13 11:28:04] -rw------- 1 boinc boinc      4824 Oct 13 11:28 pilotlog.txt
[2025-10-13 11:28:04] -rw------- 1 boinc boinc    628932 Oct 13 11:28 log.46676269._078624.job.log.1
[2025-10-13 11:28:04] -rw------- 1 boinc boinc       357 Oct 13 11:28 output.list
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:28 runtime_log
[2025-10-13 11:28:04] -rw------- 1 boinc boinc    911360 Oct 13 11:28 result.tar.gz
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc      8777 Oct 13 11:28 runtime_log.err
[2025-10-13 11:28:04] -rw------- 1 boinc boinc       658 Oct 13 11:28 oCNLDm3hAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKsjNDmUfGuEo.diag
[2025-10-13 11:28:04] -rw-r--r-- 1 boinc boinc     22119 Oct 13 11:28 stderr.txt
[2025-10-13 11:28:04] HITS file was successfully produced:
[2025-10-13 11:28:04] -rw------- 1 boinc boinc 195290521 Oct 13 11:26 shared/HITS.pool.root.1
[2025-10-13 11:28:04]  *** Contents of shared directory: ***
[2025-10-13 11:28:04] total 410212
[2025-10-13 11:28:04] -rw-r--r-- 2 boinc boinc 223250519 Oct 13 10:16 ATLAS.root_0
[2025-10-13 11:28:04] -rw-r--r-- 2 boinc boinc    569681 Oct 13 10:16 input.tar.gz
[2025-10-13 11:28:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:16 start_atlas.sh
[2025-10-13 11:28:04] -rw------- 1 boinc boinc 195290521 Oct 13 11:26 HITS.pool.root.1
[2025-10-13 11:28:04] -rw------- 1 boinc boinc    911360 Oct 13 11:28 result.tar.gz
11:28:06 (2108686): run_atlas exited; CPU time 15818.527953
11:28:06 (2108686): called boinc_finish(0)

</stderr_txt>
]]>

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