Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:16:53 (7470): wrapper (7.7.26015): starting
12:16:53 (7470): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:16:53] Arguments: --nthreads 12
[2025-10-12 12:16:53] Threads: 12
[2025-10-12 12:16:53] Checking for CVMFS
[2025-10-12 12:16:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:16:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:16:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:16:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:16:54] 2.11.2.0 3009 8377 87480 151625 3 57 18545890 20275201 1 130560 0 7930788 99.993 279866 43511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:16:54] CVMFS is ok
[2025-10-12 12:16:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:16:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:16:54] Further information can be found at the LHC@home message board.
[2025-10-12 12:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:16:54] Checking for apptainer binary...
[2025-10-12 12:16:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:16:54] Running /usr/bin/apptainer --version
[2025-10-12 12:16:54] apptainer version 1.3.2-1.el7
[2025-10-12 12:16:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:16:55] c-115-42.aglt2.org
[2025-10-12 12:16:55] apptainer works
[2025-10-12 12:16:55] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:16:55] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:16:55] Starting ATLAS job with PandaID=6839989817
[2025-10-12 12:16:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:23:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:23:22]  replicas=None
[2025-10-12 13:23:22]  scope=mc23_13p6TeV
[2025-10-12 13:23:22]  status=None
[2025-10-12 13:23:22]  status_code=0
[2025-10-12 13:23:22]  storage_token=
[2025-10-12 13:23:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839989817/log.46676269._079149.job.log.tgz.1
[2025-10-12 13:23:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/ba/log.46676269._079149.job.log.tgz.1
[2025-10-12 13:23:22]  workdir=None
[2025-10-12 13:23:22] ]
[2025-10-12 13:23:22] 2025-10-12 17:22:14,371 | INFO     | transferring file log.46676269._079149.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839989817/log.46676269._079149.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 13:23:22] 2025-10-12 17:22:14,371 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839989817/log.46676269._079149.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._079149.job
[2025-10-12 13:23:22] 2025-10-12 17:22:14,395 | INFO     | adding to output.list: log.46676269._079149.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/ba/log.46676269._079149.job.log.tg
[2025-10-12 13:23:22] 2025-10-12 17:22:14,395 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 13:23:22] 2025-10-12 17:22:14,396 | INFO     | summary of transferred files:
[2025-10-12 13:23:22] 2025-10-12 17:22:14,396 | INFO     |  -- lfn=log.46676269._079149.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 13:23:22] 2025-10-12 17:22:14,396 | INFO     | stage-out finished correctly
[2025-10-12 13:23:22] 2025-10-12 17:22:15,084 | INFO     | time since job start (3906s) is within the limit (172800.0s)
[2025-10-12 13:23:22] 2025-10-12 17:22:17,089 | INFO     | time since job start (3908s) is within the limit (172800.0s)
[2025-10-12 13:23:22] 2025-10-12 17:22:17,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 13:23:22] 2025-10-12 17:22:18,285 | WARNING  | process 17605 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 13:23:22] 2025-10-12 17:22:18,285 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989817/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:23:22] 2025-10-12 17:22:18,377 | INFO     | number of running child processes to parent process 17605: 1
[2025-10-12 13:23:22] 2025-10-12 17:22:18,377 | INFO     | maximum number of monitored processes: 6
[2025-10-12 13:23:22] 2025-10-12 17:22:18,842 | INFO     | job 6839989817 has state=finished
[2025-10-12 13:23:22] 2025-10-12 17:22:18,842 | INFO     | preparing for final server update for job 6839989817 in state='finished'
[2025-10-12 13:23:22] 2025-10-12 17:22:18,843 | INFO     | this job has now completed (state=finished)
[2025-10-12 13:23:22] 2025-10-12 17:22:18,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 13:23:22] 2025-10-12 17:22:18,843 | INFO     | log transfer has been attempted: DONE
[2025-10-12 13:23:22] 2025-10-12 17:22:18,843 | INFO     | job 6839989817 has finished - writing final server update
[2025-10-12 13:23:22] 2025-10-12 17:22:18,844 | INFO     | total number of processed events: 400 (read)
[2025-10-12 13:23:22] 2025-10-12 17:22:18,845 | INFO     | executing command: lscpu
[2025-10-12 13:23:22] 2025-10-12 17:22:18,870 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 13:23:22] 2025-10-12 17:22:19,095 | INFO     | time since job start (3910s) is within the limit (172800.0s)
[2025-10-12 13:23:22] 2025-10-12 17:22:20,880 | INFO     | monitor loop #292: job 0:6839989817 is in state 'finished'
[2025-10-12 13:23:22] 2025-10-12 17:22:20,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:23:22] 2025-10-12 17:22:21,101 | INFO     | time since job start (3912s) is within the limit (172800.0s)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,106 | INFO     | time since job start (3914s) is within the limit (172800.0s)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,351 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 13:23:22] 2025-10-12 17:22:23,355 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-12 13:23:22] 2025-10-12 17:22:23,361 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989817/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,362 | INFO     | extracted standard info from prmon json
[2025-10-12 13:23:22] 2025-10-12 17:22:23,362 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:23:22] 2025-10-12 17:22:23,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:23:22] 2025-10-12 17:22:23,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:23:22] 2025-10-12 17:22:23,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:23:22] 2025-10-12 17:22:23,365 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | sum of square deviations: 57407588.0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | sum of deviations: -2202057300.0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | mean x: 1760287871.0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | mean y: 2728514.49122807
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | -- intersect: 67524373152.07831
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | intersect: 67524373152.07831
[2025-10-12 13:23:22] 2025-10-12 17:22:23,366 | INFO     | chi2: 0.061615615762821936
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | -- intersect: 67524373152.07831
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | current memory leak: -38.36 B/s (using 57 data points, chi2=0.06)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | could have reported an average CPU frequency of 2150 MHz (6 samples)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | ..............................
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | . Timing measurements:
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | . get job = 0 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,367 | INFO     | . initial setup = 2 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,368 | INFO     | . payload setup = 6 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,368 | INFO     | . stage-in = 0 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,368 | INFO     | . payload execution = 3877 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,368 | INFO     | . stage-out = 0 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,368 | INFO     | . log creation = 0 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,368 | INFO     | ..............................
[2025-10-12 13:23:22] 2025-10-12 17:22:23,442 | INFO     | 
[2025-10-12 13:23:22] 2025-10-12 17:22:23,443 | INFO     | job summary report
[2025-10-12 13:23:22] 2025-10-12 17:22:23,443 | INFO     | --------------------------------------------------
[2025-10-12 13:23:22] 2025-10-12 17:22:23,443 | INFO     | PanDA job id: 6839989817
[2025-10-12 13:23:22] 2025-10-12 17:22:23,443 | INFO     | task id: 46676269
[2025-10-12 13:23:22] 2025-10-12 17:22:23,443 | INFO     | errors: (none)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:23:22] 2025-10-12 17:22:23,444 | INFO     | pilot state: finished 
[2025-10-12 13:23:22] 2025-10-12 17:22:23,444 | INFO     | transexitcode: 0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,444 | INFO     | exeerrorcode: 0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,444 | INFO     | exeerrordiag: 
[2025-10-12 13:23:22] 2025-10-12 17:22:23,444 | INFO     | exitcode: 0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,444 | INFO     | exitmsg: OK
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | cpuconsumptiontime: 41439 s
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | nevents: 400
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | neventsw: 0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | pid: 17605
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | pgrp: 17605
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | corecount: 12
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | event service: False
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | sizes: {0: 2348629, 1: 2348884, 5: 2349146, 12: 2349202, 3888: 2374987, 3889: 2383985, 3892: 2384169, 3898: 2384363}
[2025-10-12 13:23:22] 2025-10-12 17:22:23,445 | INFO     | --------------------------------------------------
[2025-10-12 13:23:22] 2025-10-12 17:22:23,446 | INFO     | 
[2025-10-12 13:23:22] 2025-10-12 17:22:23,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:23:22] 2025-10-12 17:22:23,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,469 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:23:22] 2025-10-12 17:22:23,471 | INFO     | job 6839989817 has completed (purged errors)
[2025-10-12 13:23:22] 2025-10-12 17:22:23,471 | INFO     | overall cleanup function is called
[2025-10-12 13:23:22] 2025-10-12 17:22:24,479 | INFO     | --- collectZombieJob: --- 10, [17605]
[2025-10-12 13:23:22] 2025-10-12 17:22:24,479 | INFO     | zombie collector waiting for pid 17605
[2025-10-12 13:23:22] 2025-10-12 17:22:24,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:23:22] 2025-10-12 17:22:24,479 | INFO     | collected zombie processes
[2025-10-12 13:23:22] 2025-10-12 17:22:24,480 | INFO     | will attempt to kill all subprocesses of pid=17605
[2025-10-12 13:23:22] 2025-10-12 17:22:24,567 | INFO     | process IDs to be killed: [17605] (in reverse order)
[2025-10-12 13:23:22] 2025-10-12 17:22:24,617 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:23:22] 2025-10-12 17:22:24,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:23:22] 2025-10-12 17:22:24,621 | INFO     | did not find any defunct processes belonging to 17605
[2025-10-12 13:23:22] 2025-10-12 17:22:24,625 | INFO     | did not find any defunct processes belonging to 17605
[2025-10-12 13:23:22] 2025-10-12 17:22:24,625 | INFO     | ready for new job
[2025-10-12 13:23:22] 2025-10-12 17:22:24,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:23:22] 2025-10-12 17:22:24,627 | INFO     | ***************************************
[2025-10-12 13:23:22] 2025-10-12 17:22:24,627 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:23:22] 2025-10-12 17:22:24,627 | INFO     | ***************************************
[2025-10-12 13:23:22] 2025-10-12 17:22:24,627 | INFO     | 
[2025-10-12 13:23:22] 2025-10-12 17:22:24,628 | INFO     | architecture information:
[2025-10-12 13:23:22] 2025-10-12 17:22:24,628 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:23:22] 2025-10-12 17:22:24,642 | INFO     | cat /etc/os-release:
[2025-10-12 13:23:22] NAME="CentOS Linux"
[2025-10-12 13:23:22] VERSION="7 (Core)"
[2025-10-12 13:23:22] ID="centos"
[2025-10-12 13:23:22] ID_LIKE="rhel fedora"
[2025-10-12 13:23:22] VERSION_ID="7"
[2025-10-12 13:23:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:23:22] ANSI_COLOR="0;31"
[2025-10-12 13:23:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:23:22] HOME_URL="https://www.centos.org/"
[2025-10-12 13:23:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:23:22] 
[2025-10-12 13:23:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:23:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:23:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:23:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:23:22] 
[2025-10-12 13:23:22] 2025-10-12 17:22:24,642 | INFO     | ***************************************
[2025-10-12 13:23:22] 2025-10-12 17:22:25,145 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:23:22] 2025-10-12 17:22:25,162 | INFO     | sufficient remaining disk space (18588106752 B)
[2025-10-12 13:23:22] 2025-10-12 17:22:25,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:23:22] 2025-10-12 17:22:25,162 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:23:22] 2025-10-12 17:22:25,162 | INFO     | update_server=False
[2025-10-12 13:23:22] 2025-10-12 17:22:25,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:23:22] 2025-10-12 17:22:25,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:23:22] 2025-10-12 17:22:25,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:23:22] 2025-10-12 17:22:25,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:23:22] 2025-10-12 17:22:25,164 | INFO     | aborting loop
[2025-10-12 13:23:22] 2025-10-12 17:22:25,830 | INFO     | all data control threads have been joined
[2025-10-12 13:23:22] 2025-10-12 17:22:25,909 | INFO     | all payload control threads have been joined
[2025-10-12 13:23:22] 2025-10-12 17:22:26,167 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:26,168 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:26,168 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:26,169 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:26,294 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:26,391 | INFO     | all job control threads have been joined
[2025-10-12 13:23:22] 2025-10-12 17:22:26,835 | INFO     | [data] control thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:26,914 | INFO     | [payload] control thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,113 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,169 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,182 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,292 | INFO     | [job] validate thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,306 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,363 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,397 | INFO     | [job] control thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,473 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:27,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:23:22] 2025-10-12 17:22:31,913 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:23:22] 2025-10-12 17:22:56,298 | INFO     | PID=11244 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:23:22] 2025-10-12 17:22:56,298 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:23:22] 2025-10-12 17:22:56,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:23:22] 2025-10-12 17:22:56,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:23:22] 2025-10-12 17:23:15,609 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:23:22] 2025-10-12 17:23:17,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635109893952)>', '<ExcThread(monitor, started 140634518177536)>']
[2025-10-12 13:23:22] 2025-10-12 17:23:17,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:23:22] 2025-10-12 17:23:17,398 | INFO     | [monitor] control thread has ended
[2025-10-12 13:23:22] 2025-10-12 17:23:22,153 | INFO     | all workflow threads have been joined
[2025-10-12 13:23:22] 2025-10-12 17:23:22,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:23:22] 2025-10-12 17:23:22,154 | INFO     | traces error code: 0
[2025-10-12 13:23:22] 2025-10-12 17:23:22,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:23:22] 2025-10-12 17:23:22,243 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:23:22] 2025-10-12 17:23:22,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:23:22] 2025-10-12 17:23:22,250 [wrapper] pilotpid: 11244
[2025-10-12 13:23:22] 2025-10-12 17:23:22,254 [wrapper] Pilot exit status: 0
[2025-10-12 13:23:22] 2025-10-12 17:23:22,268 [wrapper] pandaids: 6839989817
[2025-10-12 13:23:22] 2025-10-12 17:23:22,313 [wrapper] cleanup supervisor_pilot 15369 11245
[2025-10-12 13:23:22] 2025-10-12 17:23:22,317 [wrapper] Test setup, not cleaning
[2025-10-12 13:23:22] 2025-10-12 17:23:22,320 [wrapper] apfmon messages muted
[2025-10-12 13:23:22] 2025-10-12 17:23:22,324 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:23:22] 2025-10-12 17:23:22,329 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:23:22]  *** Error codes and diagnostics ***
[2025-10-12 13:23:22]     "exeErrorCode": 0,
[2025-10-12 13:23:22]     "exeErrorDiag": "",
[2025-10-12 13:23:22]     "pilotErrorCode": 0,
[2025-10-12 13:23:22]     "pilotErrorDiag": "",
[2025-10-12 13:23:22]  *** Listing of results directory ***
[2025-10-12 13:23:22] total 409824
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:05 queuedata.json
[2025-10-12 13:23:22] -rwx------ 1 boincer umatlas     36292 Oct 12 09:05 runpilot2-wrapper.sh
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:23:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:16 run_atlas
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:16 job.xml
[2025-10-12 13:23:22] -rw-r--r-- 2 boincer umatlas 220828865 Oct 12 12:16 EVNT.46676267._003853.pool.root.1
[2025-10-12 13:23:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:16 start_atlas.sh
[2025-10-12 13:23:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:16 shared
[2025-10-12 13:23:22] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 12:16 input.tar.gz
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:16 boinc_lockfile
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 12:16 pandaJob.out
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas    975528 Oct 12 12:17 agis_schedconf.cvmfs.json
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas   1560580 Oct 12 12:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:23:22] drwx------ 5 boincer umatlas      4096 Oct 12 12:17 pilot3
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas      5954 Oct 12 13:19 init_data.xml
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas 193006312 Oct 12 13:21 HITS.46676269._079149.pool.root.1
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas        95 Oct 12 13:21 pilot_heartbeat.json
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas       529 Oct 12 13:21 boinc_task_state.xml
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas      1049 Oct 12 13:22 memory_monitor_summary.json
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas    384196 Oct 12 13:22 log.46676269._079149.job.log.tgz.1
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas      7852 Oct 12 13:22 heartbeat.json
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:23 boinc_mmap_file
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas        27 Oct 12 13:23 wrapper_checkpoint.txt
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas      4746 Oct 12 13:23 pilotlog.txt
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas    575942 Oct 12 13:23 log.46676269._079149.job.log.1
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas       357 Oct 12 13:23 output.list
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:23 runtime_log
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas    983040 Oct 12 13:23 result.tar.gz
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 13:23 runtime_log.err
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas       659 Oct 12 13:23 AAzKDmtwAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3xTMDmZwlGNm.diag
[2025-10-12 13:23:22] -rw-r--r-- 1 boincer umatlas     21845 Oct 12 13:23 stderr.txt
[2025-10-12 13:23:22] HITS file was successfully produced:
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas 193006312 Oct 12 13:21 shared/HITS.pool.root.1
[2025-10-12 13:23:22]  *** Contents of shared directory: ***
[2025-10-12 13:23:22] total 405680
[2025-10-12 13:23:22] -rw-r--r-- 2 boincer umatlas 220828865 Oct 12 12:16 ATLAS.root_0
[2025-10-12 13:23:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:16 start_atlas.sh
[2025-10-12 13:23:22] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 12:16 input.tar.gz
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas 193006312 Oct 12 13:21 HITS.pool.root.1
[2025-10-12 13:23:22] -rw------- 1 boincer umatlas    983040 Oct 12 13:23 result.tar.gz
13:23:23 (7470): run_atlas exited; CPU time 41434.384228
13:23:23 (7470): called boinc_finish(0)

</stderr_txt>
]]>

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