Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:06 (21778): wrapper (7.7.26015): starting
12:15:06 (21778): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:15:06] Arguments: --nthreads 12
[2025-10-12 12:15:06] Threads: 12
[2025-10-12 12:15:06] Checking for CVMFS
[2025-10-12 12:15:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:15:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:15:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:15:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:15:07] 2.11.2.0 2984 223062 97644 151625 2 57 14636882 20275200 1 130560 1 110030607 99.984 13375796 12627 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:15:07] CVMFS is ok
[2025-10-12 12:15:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:15:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:15:07] Further information can be found at the LHC@home message board.
[2025-10-12 12:15:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:15:07] Checking for apptainer binary...
[2025-10-12 12:15:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:15:07] Running /usr/bin/apptainer --version
[2025-10-12 12:15:07] apptainer version 1.3.2-1.el7
[2025-10-12 12:15:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:15:08] c-205-26.aglt2.org
[2025-10-12 12:15:08] apptainer works
[2025-10-12 12:15:08] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:15:08] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:15:08] Starting ATLAS job with PandaID=6839988462
[2025-10-12 12:15:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:29:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:29:37]  replicas=None
[2025-10-12 13:29:37]  scope=mc23_13p6TeV
[2025-10-12 13:29:37]  status=None
[2025-10-12 13:29:37]  status_code=0
[2025-10-12 13:29:37]  storage_token=
[2025-10-12 13:29:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839988462/log.46676269._078555.job.log.tgz.1
[2025-10-12 13:29:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/e0/log.46676269._078555.job.log.tgz.1
[2025-10-12 13:29:37]  workdir=None
[2025-10-12 13:29:37] ]
[2025-10-12 13:29:37] 2025-10-12 17:28:27,634 | INFO     | transferring file log.46676269._078555.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839988462/log.46676269._078555.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 13:29:37] 2025-10-12 17:28:27,634 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839988462/log.46676269._078555.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._078555.job
[2025-10-12 13:29:37] 2025-10-12 17:28:27,657 | INFO     | adding to output.list: log.46676269._078555.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/e0/log.46676269._078555.job.log.tg
[2025-10-12 13:29:37] 2025-10-12 17:28:27,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 13:29:37] 2025-10-12 17:28:27,658 | INFO     | summary of transferred files:
[2025-10-12 13:29:37] 2025-10-12 17:28:27,658 | INFO     |  -- lfn=log.46676269._078555.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 13:29:37] 2025-10-12 17:28:27,658 | INFO     | stage-out finished correctly
[2025-10-12 13:29:37] 2025-10-12 17:28:28,142 | INFO     | time since job start (4385s) is within the limit (172800.0s)
[2025-10-12 13:29:37] 2025-10-12 17:28:28,795 | INFO     | monitor loop #327: job 0:6839988462 is in state 'finished'
[2025-10-12 13:29:37] 2025-10-12 17:28:28,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:29:37] 2025-10-12 17:28:29,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 13:29:37] 2025-10-12 17:28:29,931 | INFO     | job 6839988462 has state=finished
[2025-10-12 13:29:37] 2025-10-12 17:28:29,931 | INFO     | preparing for final server update for job 6839988462 in state='finished'
[2025-10-12 13:29:37] 2025-10-12 17:28:29,932 | INFO     | this job has now completed (state=finished)
[2025-10-12 13:29:37] 2025-10-12 17:28:29,932 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 13:29:37] 2025-10-12 17:28:29,932 | INFO     | log transfer has been attempted: DONE
[2025-10-12 13:29:37] 2025-10-12 17:28:29,932 | INFO     | job 6839988462 has finished - writing final server update
[2025-10-12 13:29:37] 2025-10-12 17:28:29,933 | INFO     | total number of processed events: 400 (read)
[2025-10-12 13:29:37] 2025-10-12 17:28:29,934 | INFO     | executing command: lscpu
[2025-10-12 13:29:37] 2025-10-12 17:28:29,960 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 13:29:37] 2025-10-12 17:28:30,148 | INFO     | time since job start (4387s) is within the limit (172800.0s)
[2025-10-12 13:29:37] 2025-10-12 17:28:31,298 | INFO     | monitor loop #328: job 0:6839988462 is in state 'finished'
[2025-10-12 13:29:37] 2025-10-12 17:28:31,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:29:37] 2025-10-12 17:28:32,154 | INFO     | time since job start (4389s) is within the limit (172800.0s)
[2025-10-12 13:29:37] 2025-10-12 17:28:33,801 | INFO     | monitor loop #329: job 0:6839988462 is in state 'finished'
[2025-10-12 13:29:37] 2025-10-12 17:28:33,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:29:37] 2025-10-12 17:28:34,159 | INFO     | time since job start (4391s) is within the limit (172800.0s)
[2025-10-12 13:29:37] 2025-10-12 17:28:34,893 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 13:29:37] 2025-10-12 17:28:34,896 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 13:29:37] 2025-10-12 17:28:34,898 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839988462/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:29:37] 2025-10-12 17:28:34,899 | INFO     | extracted standard info from prmon json
[2025-10-12 13:29:37] 2025-10-12 17:28:34,899 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:29:37] 2025-10-12 17:28:34,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:29:37] 2025-10-12 17:28:34,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:29:37] 2025-10-12 17:28:34,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:29:37] 2025-10-12 17:28:34,901 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:29:37] 2025-10-12 17:28:34,901 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 13:29:37] 2025-10-12 17:28:34,901 | INFO     | sum of deviations: -2077640235.9999998
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | mean x: 1760288009.0
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | mean y: 2701562.046153846
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | -- intersect: 42960141127.867165
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | intersect: 42960141127.867165
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | chi2: 0.06031081607313029
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | -- intersect: 42960141127.867165
[2025-10-12 13:29:37] 2025-10-12 17:28:34,902 | INFO     | current memory leak: -24.40 B/s (using 65 data points, chi2=0.06)
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | ..............................
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | . Timing measurements:
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | . get job = 0 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | . initial setup = 2 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | . payload setup = 7 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | . stage-in = 0 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,903 | INFO     | . payload execution = 4356 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,904 | INFO     | . stage-out = 0 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,904 | INFO     | . log creation = 0 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,904 | INFO     | ..............................
[2025-10-12 13:29:37] 2025-10-12 17:28:34,986 | INFO     | 
[2025-10-12 13:29:37] 2025-10-12 17:28:34,987 | INFO     | job summary report
[2025-10-12 13:29:37] 2025-10-12 17:28:34,987 | INFO     | --------------------------------------------------
[2025-10-12 13:29:37] 2025-10-12 17:28:34,987 | INFO     | PanDA job id: 6839988462
[2025-10-12 13:29:37] 2025-10-12 17:28:34,987 | INFO     | task id: 46676269
[2025-10-12 13:29:37] 2025-10-12 17:28:34,987 | INFO     | errors: (none)
[2025-10-12 13:29:37] 2025-10-12 17:28:34,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | pilot state: finished 
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | transexitcode: 0
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | exeerrorcode: 0
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | exeerrordiag: 
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | exitcode: 0
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | exitmsg: OK
[2025-10-12 13:29:37] 2025-10-12 17:28:34,988 | INFO     | cpuconsumptiontime: 47304 s
[2025-10-12 13:29:37] 2025-10-12 17:28:34,989 | INFO     | nevents: 400
[2025-10-12 13:29:37] 2025-10-12 17:28:34,989 | INFO     | neventsw: 0
[2025-10-12 13:29:37] 2025-10-12 17:28:34,989 | INFO     | pid: 32704
[2025-10-12 13:29:37] 2025-10-12 17:28:34,989 | INFO     | pgrp: 32704
[2025-10-12 13:29:37] 2025-10-12 17:28:34,989 | INFO     | corecount: 12
[2025-10-12 13:29:37] 2025-10-12 17:28:34,989 | INFO     | event service: False
[2025-10-12 13:29:37] 2025-10-12 17:28:34,990 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4367: 2375252, 4368: 2384250, 4369: 2384306, 4375: 2384628}
[2025-10-12 13:29:37] 2025-10-12 17:28:34,990 | INFO     | --------------------------------------------------
[2025-10-12 13:29:37] 2025-10-12 17:28:34,990 | INFO     | 
[2025-10-12 13:29:37] 2025-10-12 17:28:34,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:29:37] 2025-10-12 17:28:35,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:29:37] 2025-10-12 17:28:35,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:29:37] 2025-10-12 17:28:35,016 | INFO     | job 6839988462 has completed (purged errors)
[2025-10-12 13:29:37] 2025-10-12 17:28:35,016 | INFO     | overall cleanup function is called
[2025-10-12 13:29:37] 2025-10-12 17:28:36,067 | INFO     | --- collectZombieJob: --- 10, [32704]
[2025-10-12 13:29:37] 2025-10-12 17:28:36,067 | INFO     | zombie collector waiting for pid 32704
[2025-10-12 13:29:37] 2025-10-12 17:28:36,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:29:37] 2025-10-12 17:28:36,077 | INFO     | collected zombie processes
[2025-10-12 13:29:37] 2025-10-12 17:28:36,077 | INFO     | will attempt to kill all subprocesses of pid=32704
[2025-10-12 13:29:37] 2025-10-12 17:28:36,165 | INFO     | process IDs to be killed: [32704] (in reverse order)
[2025-10-12 13:29:37] 2025-10-12 17:28:36,218 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:29:37] 2025-10-12 17:28:36,218 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:29:37] 2025-10-12 17:28:36,222 | INFO     | did not find any defunct processes belonging to 32704
[2025-10-12 13:29:37] 2025-10-12 17:28:36,226 | INFO     | did not find any defunct processes belonging to 32704
[2025-10-12 13:29:37] 2025-10-12 17:28:36,226 | INFO     | ready for new job
[2025-10-12 13:29:37] 2025-10-12 17:28:36,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:29:37] 2025-10-12 17:28:36,227 | INFO     | ***************************************
[2025-10-12 13:29:37] 2025-10-12 17:28:36,227 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:29:37] 2025-10-12 17:28:36,227 | INFO     | ***************************************
[2025-10-12 13:29:37] 2025-10-12 17:28:36,227 | INFO     | 
[2025-10-12 13:29:37] 2025-10-12 17:28:36,228 | INFO     | architecture information:
[2025-10-12 13:29:37] 2025-10-12 17:28:36,228 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:29:37] 2025-10-12 17:28:36,243 | INFO     | cat /etc/os-release:
[2025-10-12 13:29:37] NAME="CentOS Linux"
[2025-10-12 13:29:37] VERSION="7 (Core)"
[2025-10-12 13:29:37] ID="centos"
[2025-10-12 13:29:37] ID_LIKE="rhel fedora"
[2025-10-12 13:29:37] VERSION_ID="7"
[2025-10-12 13:29:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:29:37] ANSI_COLOR="0;31"
[2025-10-12 13:29:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:29:37] HOME_URL="https://www.centos.org/"
[2025-10-12 13:29:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:29:37] 
[2025-10-12 13:29:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:29:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:29:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:29:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:29:37] 
[2025-10-12 13:29:37] 2025-10-12 17:28:36,243 | INFO     | ***************************************
[2025-10-12 13:29:37] 2025-10-12 17:28:36,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:29:37] 2025-10-12 17:28:36,762 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-10-12 13:29:37] 2025-10-12 17:28:36,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:29:37] 2025-10-12 17:28:36,762 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:29:37] 2025-10-12 17:28:36,763 | INFO     | update_server=False
[2025-10-12 13:29:37] 2025-10-12 17:28:36,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:29:37] 2025-10-12 17:28:36,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:29:37] 2025-10-12 17:28:36,763 | INFO     | all job control threads have been joined
[2025-10-12 13:29:37] 2025-10-12 17:28:37,235 | INFO     | all payload control threads have been joined
[2025-10-12 13:29:37] 2025-10-12 17:28:37,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:29:37] 2025-10-12 17:28:37,310 | INFO     | aborting loop
[2025-10-12 13:29:37] 2025-10-12 17:28:37,706 | INFO     | all data control threads have been joined
[2025-10-12 13:29:37] 2025-10-12 17:28:37,768 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:37,769 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:37,769 | INFO     | [job] control thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,219 | INFO     | [job] validate thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,241 | INFO     | [payload] control thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:29:37] 2025-10-12 17:28:38,303 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,316 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,696 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,711 | INFO     | [data] control thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,776 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,782 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:38,835 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:39,087 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:39,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:29:37] 2025-10-12 17:28:40,261 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:43,922 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:28:46,982 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:29:37] 2025-10-12 17:28:47,983 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:29:37] 2025-10-12 17:29:07,359 | INFO     | PID=25475 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:29:37] 2025-10-12 17:29:07,359 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:29:37] 2025-10-12 17:29:07,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:29:37] 2025-10-12 17:29:07,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:29:37] 2025-10-12 17:29:30,144 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:29:37] 2025-10-12 17:29:32,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618306455360)>', '<ExcThread(monitor, started 140617338308352)>']
[2025-10-12 13:29:37] 2025-10-12 17:29:32,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:29:37] 2025-10-12 17:29:32,486 | INFO     | [monitor] control thread has ended
[2025-10-12 13:29:37] 2025-10-12 17:29:37,105 | INFO     | all workflow threads have been joined
[2025-10-12 13:29:37] 2025-10-12 17:29:37,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:29:37] 2025-10-12 17:29:37,108 | INFO     | traces error code: 0
[2025-10-12 13:29:37] 2025-10-12 17:29:37,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:29:37] 2025-10-12 17:29:37,216 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:29:37] 2025-10-12 17:29:37,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:29:37] 2025-10-12 17:29:37,224 [wrapper] pilotpid: 25475
[2025-10-12 13:29:37] 2025-10-12 17:29:37,227 [wrapper] Pilot exit status: 0
[2025-10-12 13:29:37] 2025-10-12 17:29:37,243 [wrapper] pandaids: 6839988462
[2025-10-12 13:29:37] 2025-10-12 17:29:37,290 [wrapper] cleanup supervisor_pilot  7635 25476
[2025-10-12 13:29:37] 2025-10-12 17:29:37,294 [wrapper] Test setup, not cleaning
[2025-10-12 13:29:37] 2025-10-12 17:29:37,298 [wrapper] apfmon messages muted
[2025-10-12 13:29:37] 2025-10-12 17:29:37,301 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:29:37] 2025-10-12 17:29:37,304 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:29:37]  *** Error codes and diagnostics ***
[2025-10-12 13:29:37]     "exeErrorCode": 0,
[2025-10-12 13:29:37]     "exeErrorDiag": "",
[2025-10-12 13:29:37]     "pilotErrorCode": 0,
[2025-10-12 13:29:37]     "pilotErrorDiag": "",
[2025-10-12 13:29:37]  *** Listing of results directory ***
[2025-10-12 13:29:37] total 420032
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 13:29:37] -rwx------ 1 boincer umatlas     36292 Oct 12 08:45 runpilot2-wrapper.sh
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:45 queuedata.json
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:29:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:15 run_atlas
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:15 job.xml
[2025-10-12 13:29:37] -rw-r--r-- 2 boincer umatlas 222810893 Oct 12 12:15 EVNT.46676267._003811.pool.root.1
[2025-10-12 13:29:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:15 start_atlas.sh
[2025-10-12 13:29:37] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:15 shared
[2025-10-12 13:29:37] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 12:15 input.tar.gz
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:15 boinc_lockfile
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 12:15 pandaJob.out
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas    975528 Oct 12 12:15 agis_schedconf.cvmfs.json
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas   1560580 Oct 12 12:15 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:29:37] drwx------ 5 boincer umatlas      4096 Oct 12 12:15 pilot3
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas 201329935 Oct 12 13:27 HITS.46676269._078555.pool.root.1
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas       530 Oct 12 13:28 boinc_task_state.xml
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas        95 Oct 12 13:28 pilot_heartbeat.json
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas      1050 Oct 12 13:28 memory_monitor_summary.json
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas    395870 Oct 12 13:28 log.46676269._078555.job.log.tgz.1
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 13:28 init_data.xml
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas      7853 Oct 12 13:28 heartbeat.json
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:29 boinc_mmap_file
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas        27 Oct 12 13:29 wrapper_checkpoint.txt
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas      4818 Oct 12 13:29 pilotlog.txt
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas    638607 Oct 12 13:29 log.46676269._078555.job.log.1
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas       357 Oct 12 13:29 output.list
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:29 runtime_log
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas   1054720 Oct 12 13:29 result.tar.gz
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 13:29 runtime_log.err
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas       659 Oct 12 13:29 JIdLDmAdAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7qjNDmPTpXgn.diag
[2025-10-12 13:29:37] -rw-r--r-- 1 boincer umatlas     21811 Oct 12 13:29 stderr.txt
[2025-10-12 13:29:37] HITS file was successfully produced:
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas 201329935 Oct 12 13:27 shared/HITS.pool.root.1
[2025-10-12 13:29:37]  *** Contents of shared directory: ***
[2025-10-12 13:29:37] total 415816
[2025-10-12 13:29:37] -rw-r--r-- 2 boincer umatlas 222810893 Oct 12 12:15 ATLAS.root_0
[2025-10-12 13:29:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:15 start_atlas.sh
[2025-10-12 13:29:37] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 12:15 input.tar.gz
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas 201329935 Oct 12 13:27 HITS.pool.root.1
[2025-10-12 13:29:37] -rw------- 1 boincer umatlas   1054720 Oct 12 13:29 result.tar.gz
13:29:38 (21778): run_atlas exited; CPU time 47272.560509
13:29:38 (21778): called boinc_finish(0)

</stderr_txt>
]]>

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