Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:01:08 (3252009): wrapper (7.7.26015): starting
19:01:08 (3252009): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 19:01:08] Arguments: --nthreads 2
[2025-10-12 19:01:08] Threads: 2
[2025-10-12 19:01:08] Checking for CVMFS
[2025-10-12 19:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:01:14] 2.11.0.0 3252211 0 30232 151627 3 1 2383787 4194304 0 130560 0 0 0.000 1291 620 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 19:01:14] CVMFS is ok
[2025-10-12 19:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:01:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 19:01:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 19:01:14] Further information can be found at the LHC@home message board.
[2025-10-12 19:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:01:14] Checking for apptainer binary...
[2025-10-12 19:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:01:14] Running /usr/bin/apptainer --version
[2025-10-12 19:01:14] apptainer version 1.2.2-1.el8
[2025-10-12 19:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:01:15] bottom
[2025-10-12 19:01:15] apptainer works
[2025-10-12 19:01:15] Set ATHENA_PROC_NUMBER=2
[2025-10-12 19:01:15] Set ATHENA_CORE_NUMBER=2
[2025-10-12 19:01:15] Starting ATLAS job with PandaID=6839989472
[2025-10-12 19:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:09:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | INFO     | memory summary dictionary not yet available
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | could have reported an average CPU frequency of 1885 MHz (4 samples)
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | ..............................
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . Timing measurements:
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . get job = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . initial setup = 3 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . payload setup = 11 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . stage-in = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . payload execution = 183 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . stage-out = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . log creation = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | ..............................
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 19:09:06] 2025-10-12 17:08:33,937 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6839989472/pilotlog.txt
[2025-10-12 19:09:06] 2025-10-12 17:08:33,955 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 19:09:06] - Log from pilotlog.txt -
[2025-10-12 19:09:06] 2025-10-12 17:08:33,819 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 19:09:06] 2025-10-12 17:08:33,919 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-12 19:09:06] 2025-10-12 17:08:33,932 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1556.425
[2025-10-12 19:09:06] 2025-10-12 17:08:33,933 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6839989472/memory_monitor_output.txt
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | INFO     | memory summary dictionary not yet available
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | could have reported an average CPU frequency of 1885 MHz (4 samples)
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | ..............................
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . Timing measurements:
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . get job = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . initial setup = 3 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . payload setup = 11 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . stage-in = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . payload execution = 183 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . stage-out = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . log creation = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | ..............................
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 19:09:06] 2025-10-12 17:08:33,937 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6839989472/pilotlog.txt
[2025-10-12 19:09:06] 2025-10-12 17:08:33,955 | WARNING  | 
[2025-10-12 19:09:06] [begin log extracts]
[2025-10-12 19:09:06] - Log from pilotlog.txt -
[2025-10-12 19:09:06] 2025-10-12 17:08:33,819 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 19:09:06] 2025-10-12 17:08:33,919 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-12 19:09:06] 2025-10-12 17:08:33,932 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1556.425
[2025-10-12 19:09:06] 2025-10-12 17:08:33,933 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6839989472/memory_monitor_output.txt
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | INFO     | memory summary dictionary not yet available
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:09:06] 2025-10-12 17:08:33,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | could have reported an average CPU frequency of 1885 MHz (4 samples)
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | ..............................
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . Timing measurements:
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . get job = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,935 | INFO     | . initial setup = 3 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . payload setup = 11 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . stage-in = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . payload execution = 183 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . stage-out = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | . log creation = 0 s
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | ..............................
[2025-10-12 19:09:06] 2025-10-12 17:08:33,936 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 19:09:06] 2025-10-12 17:08:33,937 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6839989472/pilotlog.txt
[2025-10-12 19:09:06] [end log extracts]
[2025-10-12 19:09:06] 2025-10-12 17:08:33,956 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 19:09:06] 2025-10-12 17:08:33,957 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-12 19:09:06] 2025-10-12 17:08:34,076 | INFO     | 
[2025-10-12 19:09:06] 2025-10-12 17:08:34,077 | INFO     | job summary report
[2025-10-12 19:09:06] 2025-10-12 17:08:34,077 | INFO     | --------------------------------------------------
[2025-10-12 19:09:06] 2025-10-12 17:08:34,077 | INFO     | PanDA job id: 6839989472
[2025-10-12 19:09:06] 2025-10-12 17:08:34,077 | INFO     | task id: 46676269
[2025-10-12 19:09:06] 2025-10-12 17:08:34,077 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 19:05:14,390 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 19:09:06] 2025-10-12 17:08:34,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | pilot state: failed 
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | transexitcode: 65
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | exeerrorcode: 65
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | exitcode: 65
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | cpuconsumptiontime: 153 s
[2025-10-12 19:09:06] 2025-10-12 17:08:34,078 | INFO     | nevents: 0
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | neventsw: 0
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | pid: 3262679
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | pgrp: 3262679
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | corecount: 2
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | event service: False
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 12: 2349175, 259: 2372524, 261: 2376819, 263: 2377003, 389: 2377197}
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | --------------------------------------------------
[2025-10-12 19:09:06] 2025-10-12 17:08:34,079 | INFO     | 
[2025-10-12 19:09:06] 2025-10-12 17:08:34,080 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 19:09:06] 2025-10-12 17:08:34,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,106 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,106 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:09:06] 2025-10-12 17:08:34,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:09:06] 2025-10-12 17:08:34,109 | INFO     | job 6839989472 has completed (purged errors)
[2025-10-12 19:09:06] 2025-10-12 17:08:34,109 | INFO     | overall cleanup function is called
[2025-10-12 19:09:06] 2025-10-12 17:08:35,137 | INFO     | --- collectZombieJob: --- 10, [3262679]
[2025-10-12 19:09:06] 2025-10-12 17:08:35,138 | INFO     | zombie collector waiting for pid 3262679
[2025-10-12 19:09:06] 2025-10-12 17:08:35,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:09:06] 2025-10-12 17:08:35,138 | INFO     | collected zombie processes
[2025-10-12 19:09:06] 2025-10-12 17:08:35,138 | INFO     | will attempt to kill all subprocesses of pid=3262679
[2025-10-12 19:09:06] 2025-10-12 17:08:35,211 | INFO     | process IDs to be killed: [3262679] (in reverse order)
[2025-10-12 19:09:06] 2025-10-12 17:08:35,257 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:09:06] 2025-10-12 17:08:35,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:09:06] 2025-10-12 17:08:35,261 | INFO     | did not find any defunct processes belonging to 3262679
[2025-10-12 19:09:06] 2025-10-12 17:08:35,264 | INFO     | did not find any defunct processes belonging to 3262679
[2025-10-12 19:09:06] 2025-10-12 17:08:35,265 | INFO     | ready for new job
[2025-10-12 19:09:06] 2025-10-12 17:08:35,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:09:06] 2025-10-12 17:08:35,266 | INFO     | ***************************************
[2025-10-12 19:09:06] 2025-10-12 17:08:35,267 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:09:06] 2025-10-12 17:08:35,267 | INFO     | ***************************************
[2025-10-12 19:09:06] 2025-10-12 17:08:35,267 | INFO     | 
[2025-10-12 19:09:06] 2025-10-12 17:08:35,279 | INFO     | architecture information:
[2025-10-12 19:09:06] 2025-10-12 17:08:35,279 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:09:06] 2025-10-12 17:08:35,298 | INFO     | cat /etc/os-release:
[2025-10-12 19:09:06] NAME="CentOS Linux"
[2025-10-12 19:09:06] VERSION="7 (Core)"
[2025-10-12 19:09:06] ID="centos"
[2025-10-12 19:09:06] ID_LIKE="rhel fedora"
[2025-10-12 19:09:06] VERSION_ID="7"
[2025-10-12 19:09:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:09:06] ANSI_COLOR="0;31"
[2025-10-12 19:09:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:09:06] HOME_URL="https://www.centos.org/"
[2025-10-12 19:09:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:09:06] 
[2025-10-12 19:09:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:09:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:09:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:09:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:09:06] 
[2025-10-12 19:09:06] 2025-10-12 17:08:35,298 | INFO     | ***************************************
[2025-10-12 19:09:06] 2025-10-12 17:08:35,801 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 19:09:06] 2025-10-12 17:08:35,821 | INFO     | sufficient remaining disk space (214604709888 B)
[2025-10-12 19:09:06] 2025-10-12 17:08:35,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:09:06] 2025-10-12 17:08:35,822 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:09:06] 2025-10-12 17:08:35,822 | INFO     | update_server=False
[2025-10-12 19:09:06] 2025-10-12 17:08:35,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:09:06] 2025-10-12 17:08:35,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:09:06] 2025-10-12 17:08:35,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:09:06] 2025-10-12 17:08:36,253 | INFO     | all data control threads have been joined
[2025-10-12 19:09:06] 2025-10-12 17:08:36,289 | INFO     | all payload control threads have been joined
[2025-10-12 19:09:06] 2025-10-12 17:08:36,321 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:09:06] 2025-10-12 17:08:36,322 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:09:06] 2025-10-12 17:08:36,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:09:06] 2025-10-12 17:08:36,322 | INFO     | will abort loop
[2025-10-12 19:09:06] 2025-10-12 17:08:36,404 | INFO     | all job control threads have been joined
[2025-10-12 19:09:06] 2025-10-12 17:08:36,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:09:06] 2025-10-12 17:08:36,828 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:36,828 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:36,839 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,193 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,259 | INFO     | [data] control thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,260 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,294 | INFO     | [payload] control thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,327 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,409 | INFO     | [job] control thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,835 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,871 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:37,965 | INFO     | [job] validate thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:38,258 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:38,792 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:39,826 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:09:06] 2025-10-12 17:08:46,392 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:09:06] 2025-10-12 17:08:47,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037593356096)>', '<ExcThread(monitor, started 140037073139456)>']
[2025-10-12 19:09:06] 2025-10-12 17:08:52,797 | INFO     | all workflow threads have been joined
[2025-10-12 19:09:06] 2025-10-12 17:08:52,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:09:06] 2025-10-12 17:08:52,798 | INFO     | traces error code: 0
[2025-10-12 19:09:06] 2025-10-12 17:08:52,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:09:06] 2025-10-12 17:09:05,525 | INFO     | PID=3256182 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:09:06] 2025-10-12 17:09:05,526 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:09:06] 2025-10-12 17:09:05,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:09:06] 2025-10-12 17:09:05,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:09:06] 2025-10-12 17:09:05,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:09:06] 2025-10-12 17:09:05,527 | INFO     | [monitor] control thread has ended
[2025-10-12 19:09:06] 2025-10-12 17:09:05,680 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:09:06] 2025-10-12 17:09:05,683 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:09:06] 2025-10-12 17:09:05,687 [wrapper] pilotpid: 3256182
[2025-10-12 19:09:06] 2025-10-12 17:09:05,691 [wrapper] Pilot exit status: 0
[2025-10-12 19:09:06] 2025-10-12 17:09:05,804 [wrapper] pandaids: 6839989472
[2025-10-12 19:09:06] 2025-10-12 17:09:05,830 [wrapper] cleanup supervisor_pilot 3256188 3256183
[2025-10-12 19:09:06] 2025-10-12 17:09:05,835 [wrapper] Test setup, not cleaning
[2025-10-12 19:09:06] 2025-10-12 17:09:05,839 [wrapper] apfmon messages muted
[2025-10-12 19:09:06] 2025-10-12 17:09:05,843 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:09:06] 2025-10-12 17:09:05,846 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:09:06]  *** Error codes and diagnostics ***
[2025-10-12 19:09:06]     "exeErrorCode": 65,
[2025-10-12 19:09:06]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-12 19:09:06]     "pilotErrorCode": 1305,
[2025-10-12 19:09:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-12 19:09:06]  *** Listing of results directory ***
[2025-10-12 19:09:06] total 218704
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-12 19:09:06] -rwx------ 1 boinc boinc     36292 Oct 12 14:52 runpilot2-wrapper.sh
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:52 queuedata.json
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:09:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:01 run_atlas
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:01 job.xml
[2025-10-12 19:09:06] -rw-r--r-- 2 boinc boinc 219666343 Oct 12 19:01 EVNT.46676267._003833.pool.root.1
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc      5984 Oct 12 19:01 init_data.xml
[2025-10-12 19:09:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:01 start_atlas.sh
[2025-10-12 19:09:06] drwxrwx--x 2 boinc boinc        68 Oct 12 19:01 shared
[2025-10-12 19:09:06] -rw-r--r-- 2 boinc boinc    569681 Oct 12 19:01 input.tar.gz
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:01 boinc_lockfile
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc      2550 Oct 12 19:01 pandaJob.out
[2025-10-12 19:09:06] -rw------- 1 boinc boinc    975528 Oct 12 19:01 agis_schedconf.cvmfs.json
[2025-10-12 19:09:06] -rw------- 1 boinc boinc   1560580 Oct 12 19:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:09:06] drwx------ 5 boinc boinc      4096 Oct 12 19:01 pilot3
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc       524 Oct 12 19:04 boinc_task_state.xml
[2025-10-12 19:09:06] -rw------- 1 boinc boinc     47705 Oct 12 19:06 log.46676269._078845.job.log.tgz.1
[2025-10-12 19:09:06] -rw------- 1 boinc boinc      8058 Oct 12 19:08 heartbeat.json
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:09 boinc_mmap_file
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc        23 Oct 12 19:09 wrapper_checkpoint.txt
[2025-10-12 19:09:06] -rw------- 1 boinc boinc        95 Oct 12 19:09 pilot_heartbeat.json
[2025-10-12 19:09:06] -rw------- 1 boinc boinc       747 Oct 12 19:09 pilotlog.txt
[2025-10-12 19:09:06] -rw------- 1 boinc boinc    154481 Oct 12 19:09 log.46676269._078845.job.log.1
[2025-10-12 19:09:06] -rw------- 1 boinc boinc       188 Oct 12 19:09 output.list
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:09 runtime_log
[2025-10-12 19:09:06] -rw------- 1 boinc boinc    225280 Oct 12 19:09 result.tar.gz
[2025-10-12 19:09:06] -rw------- 1 boinc boinc       640 Oct 12 19:09 wKkKDmDkAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmvTMDmbuSoTm.diag
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc      8505 Oct 12 19:09 runtime_log.err
[2025-10-12 19:09:06] -rw-r--r-- 1 boinc boinc     21872 Oct 12 19:09 stderr.txt
[2025-10-12 19:09:06] No HITS result produced
[2025-10-12 19:09:06]  *** Contents of shared directory: ***
[2025-10-12 19:09:06] total 215316
[2025-10-12 19:09:06] -rw-r--r-- 2 boinc boinc 219666343 Oct 12 19:01 ATLAS.root_0
[2025-10-12 19:09:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:01 start_atlas.sh
[2025-10-12 19:09:06] -rw-r--r-- 2 boinc boinc    569681 Oct 12 19:01 input.tar.gz
[2025-10-12 19:09:06] -rw------- 1 boinc boinc    225280 Oct 12 19:09 result.tar.gz
19:09:08 (3252009): run_atlas exited; CPU time 135.231974
19:09:08 (3252009): called boinc_finish(0)

</stderr_txt>
]]>

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