Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:00:48 (3854267): wrapper (7.7.26015): starting
14:00:48 (3854267): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 14:00:48] Arguments: --nthreads 9
[2025-10-12 14:00:48] Threads: 9
[2025-10-12 14:00:48] Checking for CVMFS
[2025-10-12 14:00:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:00:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:00:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:00:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:00:50] 2.13.2.0 5986 6012 113276 151630 1 197 30329992 40960001 19723 16776704 0 14832824 99.954 1898982 30004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:00:50] CVMFS is ok
[2025-10-12 14:00:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:00:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:00:50] Further information can be found at the LHC@home message board.
[2025-10-12 14:00:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:00:50] Checking for apptainer binary...
[2025-10-12 14:00:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:00:50] Running /usr/bin/apptainer --version
[2025-10-12 14:00:50] apptainer version 1.4.3-1.el9
[2025-10-12 14:00:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:00:51] c-211-33-3.aglt2.org
[2025-10-12 14:00:51] apptainer works
[2025-10-12 14:00:51] Set ATHENA_PROC_NUMBER=9
[2025-10-12 14:00:51] Set ATHENA_CORE_NUMBER=9
[2025-10-12 14:00:51] Starting ATLAS job with PandaID=6840182399
[2025-10-12 14:00:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:35:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:35:03] 2025-10-13 03:33:54,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:35:03] 2025-10-13 03:33:54,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:35:03] 2025-10-13 03:33:54,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:35:03] 2025-10-13 03:33:54,982 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:35:03] 2025-10-13 03:33:54,983 | INFO     | sum of square deviations: 54455659324.7928
[2025-10-12 23:35:03] 2025-10-13 03:33:54,990 | INFO     | sum of deviations: 44323763872.60006
[2025-10-12 23:35:03] 2025-10-13 03:33:54,991 | INFO     | mean x: 1760309318.8464286
[2025-10-12 23:35:03] 2025-10-13 03:33:54,991 | INFO     | mean y: 2535852.6
[2025-10-12 23:35:03] 2025-10-13 03:33:54,991 | INFO     | -- intersect: -1430254339.6172426
[2025-10-12 23:35:03] 2025-10-13 03:33:54,991 | INFO     | intersect: -1430254339.6172426
[2025-10-12 23:35:03] 2025-10-13 03:33:54,992 | INFO     | chi2: 3.3941720412688436
[2025-10-12 23:35:03] 2025-10-13 03:33:54,993 | INFO     | sum of square deviations: 53010038745.884865
[2025-10-12 23:35:03] 2025-10-13 03:33:55,000 | INFO     | sum of deviations: 113962438094.3351
[2025-10-12 23:35:03] 2025-10-13 03:33:55,001 | INFO     | mean x: 1760309166.3477478
[2025-10-12 23:35:03] 2025-10-13 03:33:55,001 | INFO     | mean y: 2543157.708108108
[2025-10-12 23:35:03] 2025-10-13 03:33:55,001 | INFO     | -- intersect: -3781817864.143984
[2025-10-12 23:35:03] 2025-10-13 03:33:55,001 | INFO     | intersect: -3781817864.143984
[2025-10-12 23:35:03] 2025-10-13 03:33:55,002 | INFO     | chi2: 1.9970179684412745
[2025-10-12 23:35:03] 2025-10-13 03:33:55,002 | INFO     | current chi2=1.9970179684412745 (change=41.16332513025094 %)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,003 | INFO     | sum of square deviations: 51590266337.77444
[2025-10-12 23:35:03] 2025-10-13 03:33:55,010 | INFO     | sum of deviations: 112523543315.52359
[2025-10-12 23:35:03] 2025-10-13 03:33:55,010 | INFO     | mean x: 1760309013.850909
[2025-10-12 23:35:03] 2025-10-13 03:33:55,011 | INFO     | mean y: 2543003.152727273
[2025-10-12 23:35:03] 2025-10-13 03:33:55,011 | INFO     | -- intersect: -3836867444.389929
[2025-10-12 23:35:03] 2025-10-13 03:33:55,011 | INFO     | intersect: -3836867444.389929
[2025-10-12 23:35:03] 2025-10-13 03:33:55,012 | INFO     | chi2: 1.9972637922292076
[2025-10-12 23:35:03] 2025-10-13 03:33:55,012 | INFO     | current chi2=1.9972637922292076 (change=-0.012309543119679713 %)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,012 | INFO     | right removable region: 549
[2025-10-12 23:35:03] 2025-10-13 03:33:55,013 | INFO     | sum of square deviations: 53009954444.187416
[2025-10-12 23:35:03] 2025-10-13 03:33:55,020 | INFO     | sum of deviations: -74206068448.86127
[2025-10-12 23:35:03] 2025-10-13 03:33:55,020 | INFO     | mean x: 1760309471.3495495
[2025-10-12 23:35:03] 2025-10-13 03:33:55,020 | INFO     | mean y: 2548324.354954955
[2025-10-12 23:35:03] 2025-10-13 03:33:55,021 | INFO     | -- intersect: 2466720317.931657
[2025-10-12 23:35:03] 2025-10-13 03:33:55,021 | INFO     | intersect: 2466720317.931657
[2025-10-12 23:35:03] 2025-10-13 03:33:55,022 | INFO     | chi2: 1.4838931766599024
[2025-10-12 23:35:03] 2025-10-13 03:33:55,022 | INFO     | current chi2=1.4838931766599024 (change=56.28114430801868 %)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,023 | INFO     | sum of square deviations: 51590097611.77448
[2025-10-12 23:35:03] 2025-10-13 03:33:55,029 | INFO     | sum of deviations: -83177847134.97821
[2025-10-12 23:35:03] 2025-10-13 03:33:55,030 | INFO     | mean x: 1760309623.850909
[2025-10-12 23:35:03] 2025-10-13 03:33:55,030 | INFO     | mean y: 2549279.2563636363
[2025-10-12 23:35:03] 2025-10-13 03:33:55,030 | INFO     | -- intersect: 2840666894.47647
[2025-10-12 23:35:03] 2025-10-13 03:33:55,030 | INFO     | intersect: 2840666894.47647
[2025-10-12 23:35:03] 2025-10-13 03:33:55,031 | INFO     | chi2: 1.4410752440373091
[2025-10-12 23:35:03] 2025-10-13 03:33:55,031 | INFO     | current chi2=1.4410752440373091 (change=2.885513141786406 %)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,032 | INFO     | left removable region: 20
[2025-10-12 23:35:03] 2025-10-13 03:33:55,032 | INFO     | sum of square deviations: 45903495919.75805
[2025-10-12 23:35:03] 2025-10-13 03:33:55,040 | INFO     | sum of deviations: 2776823467.7145576
[2025-10-12 23:35:03] 2025-10-13 03:33:55,040 | INFO     | mean x: 1760309593.3591683
[2025-10-12 23:35:03] 2025-10-13 03:33:55,040 | INFO     | mean y: 2554874.5330812857
[2025-10-12 23:35:03] 2025-10-13 03:33:55,041 | INFO     | -- intersect: -103930892.86527622
[2025-10-12 23:35:03] 2025-10-13 03:33:55,041 | INFO     | intersect: -103930892.86527622
[2025-10-12 23:35:03] 2025-10-13 03:33:55,041 | INFO     | chi2: 0.009966367993672268
[2025-10-12 23:35:03] 2025-10-13 03:33:55,042 | INFO     | -- intersect: -103930892.86527622
[2025-10-12 23:35:03] 2025-10-13 03:33:55,042 | INFO     | current memory leak: 0.06 B/s (using 529 data points, chi2=0.01)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,043 | INFO     | could have reported an average CPU frequency of 2534 MHz (22 samples)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,043 | INFO     | ..............................
[2025-10-12 23:35:03] 2025-10-13 03:33:55,043 | INFO     | . Timing measurements:
[2025-10-12 23:35:03] 2025-10-13 03:33:55,043 | INFO     | . get job = 0 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,043 | INFO     | . initial setup = 3 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,044 | INFO     | . payload setup = 43 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,044 | INFO     | . stage-in = 0 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,044 | INFO     | . payload execution = 34168 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,044 | INFO     | . stage-out = 2 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,044 | INFO     | . log creation = 0 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,044 | INFO     | ..............................
[2025-10-12 23:35:03] 2025-10-13 03:33:55,649 | INFO     | 
[2025-10-12 23:35:03] 2025-10-13 03:33:55,649 | INFO     | job summary report
[2025-10-12 23:35:03] 2025-10-13 03:33:55,649 | INFO     | --------------------------------------------------
[2025-10-12 23:35:03] 2025-10-13 03:33:55,649 | INFO     | PanDA job id: 6840182399
[2025-10-12 23:35:03] 2025-10-13 03:33:55,649 | INFO     | task id: 46676269
[2025-10-12 23:35:03] 2025-10-13 03:33:55,649 | INFO     | errors: (none)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | pilot state: finished 
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | transexitcode: 0
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | exeerrorcode: 0
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | exeerrordiag: 
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | exitcode: 0
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | exitmsg: OK
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | cpuconsumptiontime: 55330 s
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | nevents: 400
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | neventsw: 0
[2025-10-12 23:35:03] 2025-10-13 03:33:55,650 | INFO     | pid: 3868891
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | pgrp: 3868891
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | corecount: 9
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | event service: False
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 23: 2348969, 34: 2348997, 36: 2349415, 46: 2349443, 34215: 2389250, 34216: 2389249, 34220: 2398303, 34222:
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | --------------------------------------------------
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | 
[2025-10-12 23:35:03] 2025-10-13 03:33:55,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:35:03] 2025-10-13 03:33:55,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:35:03] 2025-10-13 03:33:55,746 | INFO     | job 6840182399 has completed (purged errors)
[2025-10-12 23:35:03] 2025-10-13 03:33:55,747 | INFO     | overall cleanup function is called
[2025-10-12 23:35:03] 2025-10-13 03:33:56,761 | INFO     | --- collectZombieJob: --- 10, [3868891]
[2025-10-12 23:35:03] 2025-10-13 03:33:56,761 | INFO     | zombie collector waiting for pid 3868891
[2025-10-12 23:35:03] 2025-10-13 03:33:56,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:35:03] 2025-10-13 03:33:56,761 | INFO     | collected zombie processes
[2025-10-12 23:35:03] 2025-10-13 03:33:56,761 | INFO     | will attempt to kill all subprocesses of pid=3868891
[2025-10-12 23:35:03] 2025-10-13 03:33:57,469 | INFO     | process IDs to be killed: [3868891] (in reverse order)
[2025-10-12 23:35:03] 2025-10-13 03:33:57,709 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:35:03] 2025-10-13 03:33:57,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:35:03] 2025-10-13 03:33:57,734 | INFO     | did not find any defunct processes belonging to 3868891
[2025-10-12 23:35:03] 2025-10-13 03:33:57,768 | INFO     | did not find any defunct processes belonging to 3868891
[2025-10-12 23:35:03] 2025-10-13 03:33:57,769 | INFO     | ready for new job
[2025-10-12 23:35:03] 2025-10-13 03:33:57,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:35:03] 2025-10-13 03:33:57,773 | INFO     | ***************************************
[2025-10-12 23:35:03] 2025-10-13 03:33:57,773 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:35:03] 2025-10-13 03:33:57,773 | INFO     | ***************************************
[2025-10-12 23:35:03] 2025-10-13 03:33:57,773 | INFO     | 
[2025-10-12 23:35:03] 2025-10-13 03:33:57,778 | INFO     | architecture information:
[2025-10-12 23:35:03] 2025-10-13 03:33:57,778 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:35:03] 2025-10-13 03:33:57,838 | INFO     | cat /etc/os-release:
[2025-10-12 23:35:03] NAME="CentOS Linux"
[2025-10-12 23:35:03] VERSION="7 (Core)"
[2025-10-12 23:35:03] ID="centos"
[2025-10-12 23:35:03] ID_LIKE="rhel fedora"
[2025-10-12 23:35:03] VERSION_ID="7"
[2025-10-12 23:35:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:35:03] ANSI_COLOR="0;31"
[2025-10-12 23:35:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:35:03] HOME_URL="https://www.centos.org/"
[2025-10-12 23:35:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:35:03] 
[2025-10-12 23:35:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:35:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:35:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:35:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:35:03] 
[2025-10-12 23:35:03] 2025-10-13 03:33:57,839 | INFO     | ***************************************
[2025-10-12 23:35:03] 2025-10-13 03:33:58,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:35:03] 2025-10-13 03:33:58,401 | INFO     | sufficient remaining disk space (127910543360 B)
[2025-10-12 23:35:03] 2025-10-13 03:33:58,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:35:03] 2025-10-13 03:33:58,402 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:35:03] 2025-10-13 03:33:58,402 | INFO     | update_server=False
[2025-10-12 23:35:03] 2025-10-13 03:33:58,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:35:03] 2025-10-13 03:33:58,594 | INFO     | all payload control threads have been joined
[2025-10-12 23:35:03] 2025-10-13 03:33:58,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:35:03] 2025-10-13 03:33:58,717 | INFO     | aborting loop
[2025-10-12 23:35:03] 2025-10-13 03:33:58,741 | INFO     | all data control threads have been joined
[2025-10-12 23:35:03] 2025-10-13 03:33:59,408 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:33:59,600 | INFO     | [payload] control thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:33:59,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:35:03] 2025-10-13 03:33:59,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:33:59,724 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:33:59,747 | INFO     | [data] control thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:33:59,853 | INFO     | all job control threads have been joined
[2025-10-12 23:35:03] 2025-10-13 03:34:00,040 | INFO     | [job] validate thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,095 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:35:03] 2025-10-13 03:34:00,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:35:03] 2025-10-13 03:34:00,296 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,327 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,640 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,641 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,785 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:00,859 | INFO     | [job] control thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:01,183 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:01,658 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:04,142 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:35:03] 2025-10-13 03:34:28,397 | INFO     | PID=3861576 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:35:03] 2025-10-13 03:34:28,398 | INFO     | .. there are 15 such processes running
[2025-10-12 23:35:03] 2025-10-13 03:34:28,399 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:35:03] 2025-10-13 03:34:28,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:35:03] 2025-10-13 03:34:28,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:35:03] 2025-10-13 03:34:57,584 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:35:03] 2025-10-13 03:34:57,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233403606848)>', '<ExcThread(monitor, started 140232678692608)>']
[2025-10-12 23:35:03] 2025-10-13 03:34:58,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:35:03] 2025-10-13 03:34:58,581 | INFO     | [monitor] control thread has ended
[2025-10-12 23:35:03] 2025-10-13 03:35:02,658 | INFO     | all workflow threads have been joined
[2025-10-12 23:35:03] 2025-10-13 03:35:02,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:35:03] 2025-10-13 03:35:02,658 | INFO     | traces error code: 0
[2025-10-12 23:35:03] 2025-10-13 03:35:02,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:35:03] 2025-10-13 03:35:02,899 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:35:03] 2025-10-13 03:35:02,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:35:03] 2025-10-13 03:35:02,950 [wrapper] pilotpid: 3861576
[2025-10-12 23:35:03] 2025-10-13 03:35:02,955 [wrapper] Pilot exit status: 0
[2025-10-12 23:35:03] 2025-10-13 03:35:02,993 [wrapper] pandaids: 6840182399
[2025-10-12 23:35:03] 2025-10-13 03:35:03,107 [wrapper] cleanup supervisor_pilot  734478 3861577
[2025-10-12 23:35:03] 2025-10-13 03:35:03,111 [wrapper] Test setup, not cleaning
[2025-10-12 23:35:03] 2025-10-13 03:35:03,116 [wrapper] apfmon messages muted
[2025-10-12 23:35:03] 2025-10-13 03:35:03,125 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:35:03] 2025-10-13 03:35:03,130 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:35:03]  *** Error codes and diagnostics ***
[2025-10-12 23:35:03]     "exeErrorCode": 0,
[2025-10-12 23:35:03]     "exeErrorDiag": "",
[2025-10-12 23:35:03]     "pilotErrorCode": 0,
[2025-10-12 23:35:03]     "pilotErrorDiag": "",
[2025-10-12 23:35:03]  *** Listing of results directory ***
[2025-10-12 23:35:03] total 418808
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 23:35:03] -rwx------. 1 boincer umatlas     36292 Oct 12 10:49 runpilot2-wrapper.sh
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:49 queuedata.json
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:35:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:00 run_atlas
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:00 job.xml
[2025-10-12 23:35:03] -rw-r--r--. 2 boincer umatlas 220037905 Oct 12 14:00 EVNT.46676267._004535.pool.root.1
[2025-10-12 23:35:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:00 start_atlas.sh
[2025-10-12 23:35:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:00 shared
[2025-10-12 23:35:03] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 14:00 input.tar.gz
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:00 boinc_lockfile
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:00 pandaJob.out
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas    975528 Oct 12 14:01 agis_schedconf.cvmfs.json
[2025-10-12 23:35:03] drwx------. 5 boincer umatlas      4096 Oct 12 14:01 pilot3
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 23:29 init_data.xml
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas 194884692 Oct 12 23:30 HITS.46676269._081244.pool.root.1
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:30 boinc_task_state.xml
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas      1046 Oct 12 23:33 memory_monitor_summary.json
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas    728750 Oct 12 23:33 log.46676269._081244.job.log.tgz.1
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas      7833 Oct 12 23:33 heartbeat.json
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas        95 Oct 12 23:34 pilot_heartbeat.json
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:35 boinc_mmap_file
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas      4825 Oct 12 23:35 pilotlog.txt
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:35 wrapper_checkpoint.txt
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas   4287613 Oct 12 23:35 log.46676269._081244.job.log.1
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas       357 Oct 12 23:35 output.list
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:35 runtime_log
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas   5038080 Oct 12 23:35 result.tar.gz
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 23:35 runtime_log.err
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas       660 Oct 12 23:35 L7mNDmMZCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrJkNDmfugMpn.diag
[2025-10-12 23:35:03] -rw-r--r--. 1 boincer umatlas     21020 Oct 12 23:35 stderr.txt
[2025-10-12 23:35:03] HITS file was successfully produced:
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas 194884692 Oct 12 23:30 shared/HITS.pool.root.1
[2025-10-12 23:35:03]  *** Contents of shared directory: ***
[2025-10-12 23:35:03] total 410704
[2025-10-12 23:35:03] -rw-r--r--. 2 boincer umatlas 220037905 Oct 12 14:00 ATLAS.root_0
[2025-10-12 23:35:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:00 start_atlas.sh
[2025-10-12 23:35:03] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 14:00 input.tar.gz
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas 194884692 Oct 12 23:30 HITS.pool.root.1
[2025-10-12 23:35:03] -rw-------. 1 boincer umatlas   5038080 Oct 12 23:35 result.tar.gz
23:35:05 (3854267): run_atlas exited; CPU time 56824.965940
23:35:05 (3854267): called boinc_finish(0)

</stderr_txt>
]]>

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