Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:49:08 (3203857): wrapper (7.7.26015): starting
05:49:08 (3203857): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 05:49:08] Arguments: --nthreads 4
[2025-10-14 05:49:08] Threads: 4
[2025-10-14 05:49:08] Checking for CVMFS
[2025-10-14 05:49:08] No cvmfs_config command found, will try listing directly
[2025-10-14 05:49:08] CVMFS is ok
[2025-10-14 05:49:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 05:49:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 05:49:08] Further information can be found at the LHC@home message board.
[2025-10-14 05:49:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:49:08] Checking for apptainer binary...
[2025-10-14 05:49:08] which: no apptainer in ((null))
[2025-10-14 05:49:08] apptainer is not installed, using version from CVMFS
[2025-10-14 05:49:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:49:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-14 05:49:08] apptainer works
[2025-10-14 05:49:08] Set ATHENA_PROC_NUMBER=4
[2025-10-14 05:49:08] Set ATHENA_CORE_NUMBER=4
[2025-10-14 05:49:08] Starting ATLAS job with PandaID=6839588772
[2025-10-14 05:49:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 08:40:26]  *** The last 200 lines of the pilot log: ***
[2025-10-14 08:40:26] 2025-10-14 06:37:43,250 | INFO     | time since job start (10100s) is within the limit (172800.0s)
[2025-10-14 08:40:26] 2025-10-14 06:37:44,977 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 08:40:26] 2025-10-14 06:37:44,998 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2702.4009531250013
[2025-10-14 08:40:26] 2025-10-14 06:37:45,024 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6839588772/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,024 | INFO     | extracted standard info from prmon json
[2025-10-14 08:40:26] 2025-10-14 06:37:45,024 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 08:40:26] 2025-10-14 06:37:45,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 08:40:26] 2025-10-14 06:37:45,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 08:40:26] 2025-10-14 06:37:45,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 08:40:26] 2025-10-14 06:37:45,028 | INFO     | fitting pss+swap vs Time
[2025-10-14 08:40:26] 2025-10-14 06:37:45,028 | INFO     | sum of square deviations: 1392881930.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,029 | INFO     | sum of deviations: 22388325713.000004
[2025-10-14 08:40:26] 2025-10-14 06:37:45,029 | INFO     | mean x: 1760418801.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,029 | INFO     | mean y: 2314122.4242424243
[2025-10-14 08:40:26] 2025-10-14 06:37:45,029 | INFO     | -- intersect: -28293572742.93048
[2025-10-14 08:40:26] 2025-10-14 06:37:45,030 | INFO     | intersect: -28293572742.93048
[2025-10-14 08:40:26] 2025-10-14 06:37:45,030 | INFO     | chi2: 1.348763278566249
[2025-10-14 08:40:26] 2025-10-14 06:37:45,030 | INFO     | sum of square deviations: 1270051720.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,031 | INFO     | sum of deviations: 21055652735.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,031 | INFO     | mean x: 1760418648.5
[2025-10-14 08:40:26] 2025-10-14 06:37:45,031 | INFO     | mean y: 2312472.1375
[2025-10-14 08:40:26] 2025-10-14 06:37:45,031 | INFO     | -- intersect: -29182927110.88832
[2025-10-14 08:40:26] 2025-10-14 06:37:45,031 | INFO     | intersect: -29182927110.88832
[2025-10-14 08:40:26] 2025-10-14 06:37:45,032 | INFO     | chi2: 1.3497567564624249
[2025-10-14 08:40:26] 2025-10-14 06:37:45,032 | INFO     | current chi2=1.3497567564624249 (change=-0.07365843302258836 %)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,032 | INFO     | right removable region: 159
[2025-10-14 08:40:26] 2025-10-14 06:37:45,032 | INFO     | sum of square deviations: 1270051720.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,033 | INFO     | sum of deviations: 1406347527.5
[2025-10-14 08:40:26] 2025-10-14 06:37:45,033 | INFO     | mean x: 1760418953.5
[2025-10-14 08:40:26] 2025-10-14 06:37:45,033 | INFO     | mean y: 2339753.46875
[2025-10-14 08:40:26] 2025-10-14 06:37:45,033 | INFO     | -- intersect: -1946998847.1819878
[2025-10-14 08:40:26] 2025-10-14 06:37:45,034 | INFO     | intersect: -1946998847.1819878
[2025-10-14 08:40:26] 2025-10-14 06:37:45,034 | INFO     | chi2: 0.004701677680646993
[2025-10-14 08:40:26] 2025-10-14 06:37:45,034 | INFO     | current chi2=0.004701677680646993 (change=99.65140823780101 %)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,034 | INFO     | sum of square deviations: 1154663510.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,035 | INFO     | sum of deviations: 1600208241.9999998
[2025-10-14 08:40:26] 2025-10-14 06:37:45,035 | INFO     | mean x: 1760419106.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,035 | INFO     | mean y: 2339490.606451613
[2025-10-14 08:40:26] 2025-10-14 06:37:45,036 | INFO     | -- intersect: -2437364491.028398
[2025-10-14 08:40:26] 2025-10-14 06:37:45,036 | INFO     | intersect: -2437364491.028398
[2025-10-14 08:40:26] 2025-10-14 06:37:45,036 | INFO     | chi2: 0.004398575792736789
[2025-10-14 08:40:26] 2025-10-14 06:37:45,036 | INFO     | current chi2=0.004398575792736789 (change=6.446675176348863 %)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,036 | INFO     | left removable region: 20
[2025-10-14 08:40:26] 2025-10-14 06:37:45,036 | INFO     | sum of square deviations: 832722590.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,037 | INFO     | sum of deviations: 2310283744.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,037 | INFO     | mean x: 1760419228.0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,037 | INFO     | mean y: 2336205.179856115
[2025-10-14 08:40:26] 2025-10-14 06:37:45,037 | INFO     | -- intersect: -4881724794.142175
[2025-10-14 08:40:26] 2025-10-14 06:37:45,037 | INFO     | intersect: -4881724794.142175
[2025-10-14 08:40:26] 2025-10-14 06:37:45,038 | INFO     | chi2: 0.0002396099993843748
[2025-10-14 08:40:26] 2025-10-14 06:37:45,038 | INFO     | -- intersect: -4881724794.142175
[2025-10-14 08:40:26] 2025-10-14 06:37:45,038 | INFO     | current memory leak: 2.77 B/s (using 139 data points, chi2=0.00)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,038 | INFO     | could have reported an average CPU frequency of 2720 MHz (9 samples)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,038 | INFO     | ..............................
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . Timing measurements:
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . get job = 0 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . initial setup = 1 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . payload setup = 9 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . stage-in = 0 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . payload execution = 10056 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . stage-out = 0 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | . log creation = 0 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,039 | INFO     | ..............................
[2025-10-14 08:40:26] 2025-10-14 06:37:45,132 | INFO     | 
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | job summary report
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | --------------------------------------------------
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | PanDA job id: 6839588772
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | task id: 46676269
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | errors: (none)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | pilot state: finished 
[2025-10-14 08:40:26] 2025-10-14 06:37:45,133 | INFO     | transexitcode: 0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | exeerrorcode: 0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | exeerrordiag: 
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | exitcode: 0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | exitmsg: OK
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | cpuconsumptiontime: 39090 s
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | nevents: 400
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | neventsw: 0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | pid: 3246207
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | pgrp: 3246207
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | corecount: 4
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | event service: False
[2025-10-14 08:40:26] 2025-10-14 06:37:45,134 | INFO     | sizes: {0: 2348698, 1: 2348897, 8: 2349159, 11: 2349187, 10069: 2378295, 10071: 2387317, 10073: 2387501, 10083: 2387759}
[2025-10-14 08:40:26] 2025-10-14 06:37:45,135 | INFO     | --------------------------------------------------
[2025-10-14 08:40:26] 2025-10-14 06:37:45,135 | INFO     | 
[2025-10-14 08:40:26] 2025-10-14 06:37:45,135 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-14 08:40:26] 2025-10-14 06:37:45,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 08:40:26] 2025-10-14 06:37:45,167 | INFO     | job 6839588772 has completed (purged errors)
[2025-10-14 08:40:26] 2025-10-14 06:37:45,168 | INFO     | overall cleanup function is called
[2025-10-14 08:40:26] 2025-10-14 06:37:46,177 | INFO     | --- collectZombieJob: --- 10, [3246207]
[2025-10-14 08:40:26] 2025-10-14 06:37:46,178 | INFO     | zombie collector waiting for pid 3246207
[2025-10-14 08:40:26] 2025-10-14 06:37:46,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 08:40:26] 2025-10-14 06:37:46,178 | INFO     | collected zombie processes
[2025-10-14 08:40:26] 2025-10-14 06:37:46,178 | INFO     | will attempt to kill all subprocesses of pid=3246207
[2025-10-14 08:40:26] 2025-10-14 06:37:47,047 | INFO     | process IDs to be killed: [3246207] (in reverse order)
[2025-10-14 08:40:26] 2025-10-14 06:37:47,302 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 08:40:26] 2025-10-14 06:37:47,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 08:40:26] 2025-10-14 06:37:47,338 | INFO     | did not find any defunct processes belonging to 3246207
[2025-10-14 08:40:26] 2025-10-14 06:37:47,370 | INFO     | did not find any defunct processes belonging to 3246207
[2025-10-14 08:40:26] 2025-10-14 06:37:47,371 | INFO     | ready for new job
[2025-10-14 08:40:26] 2025-10-14 06:37:47,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 08:40:26] 2025-10-14 06:37:47,374 | INFO     | ***************************************
[2025-10-14 08:40:26] 2025-10-14 06:37:47,374 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 08:40:26] 2025-10-14 06:37:47,374 | INFO     | ***************************************
[2025-10-14 08:40:26] 2025-10-14 06:37:47,374 | INFO     | 
[2025-10-14 08:40:26] 2025-10-14 06:37:47,382 | INFO     | architecture information:
[2025-10-14 08:40:26] 2025-10-14 06:37:47,383 | INFO     | executing command: cat /etc/os-release
[2025-10-14 08:40:26] 2025-10-14 06:37:47,409 | INFO     | cat /etc/os-release:
[2025-10-14 08:40:26] NAME="CentOS Linux"
[2025-10-14 08:40:26] VERSION="7 (Core)"
[2025-10-14 08:40:26] ID="centos"
[2025-10-14 08:40:26] ID_LIKE="rhel fedora"
[2025-10-14 08:40:26] VERSION_ID="7"
[2025-10-14 08:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 08:40:26] ANSI_COLOR="0;31"
[2025-10-14 08:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 08:40:26] HOME_URL="https://www.centos.org/"
[2025-10-14 08:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 08:40:26] 
[2025-10-14 08:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 08:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 08:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 08:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 08:40:26] 
[2025-10-14 08:40:26] 2025-10-14 06:37:47,409 | INFO     | ***************************************
[2025-10-14 08:40:26] 2025-10-14 06:37:47,912 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-14 08:40:26] 2025-10-14 06:37:47,940 | INFO     | sufficient remaining disk space (3202993881088 B)
[2025-10-14 08:40:26] 2025-10-14 06:37:47,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 08:40:26] 2025-10-14 06:37:47,943 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 08:40:26] 2025-10-14 06:37:47,943 | INFO     | update_server=False
[2025-10-14 08:40:26] 2025-10-14 06:37:47,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 08:40:26] 2025-10-14 06:37:48,095 | INFO     | all data control threads have been joined
[2025-10-14 08:40:26] 2025-10-14 06:37:48,208 | INFO     | all payload control threads have been joined
[2025-10-14 08:40:26] 2025-10-14 06:37:48,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 08:40:26] 2025-10-14 06:37:48,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 08:40:26] 2025-10-14 06:37:48,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 08:40:26] 2025-10-14 06:37:48,245 | INFO     | will abort loop
[2025-10-14 08:40:26] 2025-10-14 06:37:48,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 08:40:26] 2025-10-14 06:37:48,948 | INFO     | [job] retrieve thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:49,100 | INFO     | [data] control thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:49,213 | INFO     | [payload] control thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:49,217 | INFO     | [job] validate thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:49,249 | INFO     | [job] job monitor thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:49,291 | INFO     | all job control threads have been joined
[2025-10-14 08:40:26] 2025-10-14 06:37:49,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:49,567 | INFO     | [data] copytool_in thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,138 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,138 | INFO     | [payload] validate_post thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 08:40:26] 2025-10-14 06:37:50,143 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 08:40:26] 2025-10-14 06:37:50,296 | INFO     | [job] control thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,324 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,482 | INFO     | [payload] failed_post thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:50,803 | INFO     | [data] copytool_out thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:51,147 | INFO     | [job] queue monitor thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:37:54,165 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 08:40:26] 2025-10-14 06:38:17,338 | INFO     | PID=3215804 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 08:40:26] 2025-10-14 06:38:17,338 | INFO     | .. there are 2 such processes running
[2025-10-14 08:40:26] 2025-10-14 06:38:17,339 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 08:40:26] 2025-10-14 06:38:17,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 08:40:26] 2025-10-14 06:38:17,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 08:40:26] 2025-10-14 06:38:39,927 | INFO     | [monitor] cgroup control has ended
[2025-10-14 08:40:26] 2025-10-14 06:38:40,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23082508502848)>', '<ExcThread(monitor, started 23082269898496)>']
[2025-10-14 08:40:26] 2025-10-14 06:38:40,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 08:40:26] 2025-10-14 06:38:40,537 | INFO     | [monitor] control thread has ended
[2025-10-14 08:40:26] 2025-10-14 06:38:45,442 | INFO     | all workflow threads have been joined
[2025-10-14 08:40:26] 2025-10-14 06:38:45,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 08:40:26] 2025-10-14 06:38:45,443 | INFO     | traces error code: 0
[2025-10-14 08:40:26] 2025-10-14 06:38:45,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 08:40:26] 2025-10-14 06:38:45,687 [wrapper] ==== pilot stdout END ====
[2025-10-14 08:40:26] 2025-10-14 06:38:45,692 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 08:40:26] 2025-10-14 06:38:45,696 [wrapper] pilotpid: 3215804
[2025-10-14 08:40:26] 2025-10-14 06:38:45,700 [wrapper] Pilot exit status: 0
[2025-10-14 08:40:26] 2025-10-14 06:38:45,716 [wrapper] pandaids: 6839588772
[2025-10-14 08:40:26] 2025-10-14 06:38:45,913 [wrapper] cleanup supervisor_pilot 3592139 3215805
[2025-10-14 08:40:26] 2025-10-14 06:38:45,918 [wrapper] Test setup, not cleaning
[2025-10-14 08:40:26] 2025-10-14 06:38:45,923 [wrapper] apfmon messages muted
[2025-10-14 08:40:26] 2025-10-14 06:38:45,926 [wrapper] ==== wrapper stdout END ====
[2025-10-14 08:40:26] 2025-10-14 06:38:45,930 [wrapper] ==== wrapper stderr END ====
[2025-10-14 08:40:26]  *** Error codes and diagnostics ***
[2025-10-14 08:40:26]     "exeErrorCode": 0,
[2025-10-14 08:40:26]     "exeErrorDiag": "",
[2025-10-14 08:40:26]     "pilotErrorCode": 0,
[2025-10-14 08:40:26]     "pilotErrorDiag": "",
[2025-10-14 08:40:26]  *** Listing of results directory ***
[2025-10-14 08:40:26] total 413732
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 07:26 pilot3.tar.gz
[2025-10-14 08:40:26] -rwx------ 1 boinc boinc     36292 Oct 12 07:28 runpilot2-wrapper.sh
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 07:28 queuedata.json
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc       100 Oct 14 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 08:40:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 05:49 run_atlas
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc       105 Oct 14 05:49 job.xml
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc      6688 Oct 14 05:49 init_data.xml
[2025-10-14 08:40:26] -rw-r--r-- 2 boinc boinc 220517988 Oct 14 05:49 EVNT.46676267._004321.pool.root.1
[2025-10-14 08:40:26] -rw-r--r-- 2 boinc boinc     15120 Oct 14 05:49 start_atlas.sh
[2025-10-14 08:40:26] drwxrwx--x 2 boinc boinc      4096 Oct 14 05:49 shared
[2025-10-14 08:40:26] -rw-r--r-- 2 boinc boinc    569675 Oct 14 05:49 input.tar.gz
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc         0 Oct 14 05:49 boinc_lockfile
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc      2550 Oct 14 05:49 pandaJob.out
[2025-10-14 08:40:26] -rw------- 1 boinc boinc    972807 Oct 14 05:49 agis_schedconf.cvmfs.json
[2025-10-14 08:40:26] -rw------- 1 boinc boinc   1560580 Oct 14 05:49 agis_ddmendpoints.agis.ALL.json
[2025-10-14 08:40:26] drwx------ 5 boinc boinc      4096 Oct 14 05:49 pilot3
[2025-10-14 08:40:26] -rw------- 1 boinc boinc 195733809 Oct 14 08:36 HITS.46676269._071964.pool.root.1
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc       528 Oct 14 08:37 boinc_task_state.xml
[2025-10-14 08:40:26] -rw------- 1 boinc boinc      1035 Oct 14 08:37 memory_monitor_summary.json
[2025-10-14 08:40:26] -rw------- 1 boinc boinc    353254 Oct 14 08:37 log.46676269._071964.job.log.tgz.1
[2025-10-14 08:40:26] -rw------- 1 boinc boinc      7790 Oct 14 08:37 heartbeat.json
[2025-10-14 08:40:26] -rw------- 1 boinc boinc        95 Oct 14 08:38 pilot_heartbeat.json
[2025-10-14 08:40:26] -rw------- 1 boinc boinc      5021 Oct 14 08:38 pilotlog.txt
[2025-10-14 08:40:26] -rw------- 1 boinc boinc   1409485 Oct 14 08:38 log.46676269._071964.job.log.1
[2025-10-14 08:40:26] -rw------- 1 boinc boinc       357 Oct 14 08:38 output.list
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc       620 Oct 14 08:38 runtime_log
[2025-10-14 08:40:26] -rw------- 1 boinc boinc   1781760 Oct 14 08:38 result.tar.gz
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc      9085 Oct 14 08:38 runtime_log.err
[2025-10-14 08:40:26] -rw------- 1 boinc boinc       666 Oct 14 08:38 RdSNDmyn3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTkiNDmaSHdxm.diag
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc        26 Oct 14 08:40 wrapper_checkpoint.txt
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc      8192 Oct 14 08:40 boinc_mmap_file
[2025-10-14 08:40:26] -rw-r--r-- 1 boinc boinc      1895 Oct 14 08:40 stderr.txt
[2025-10-14 08:40:26] HITS file was successfully produced:
[2025-10-14 08:40:26] -rw------- 1 boinc boinc 195733809 Oct 14 08:36 shared/HITS.pool.root.1
[2025-10-14 08:40:26]  *** Contents of shared directory: ***
[2025-10-14 08:40:26] total 408824
[2025-10-14 08:40:26] -rw-r--r-- 2 boinc boinc 220517988 Oct 14 05:49 ATLAS.root_0
[2025-10-14 08:40:26] -rw-r--r-- 2 boinc boinc     15120 Oct 14 05:49 start_atlas.sh
[2025-10-14 08:40:26] -rw-r--r-- 2 boinc boinc    569675 Oct 14 05:49 input.tar.gz
[2025-10-14 08:40:26] -rw------- 1 boinc boinc 195733809 Oct 14 08:36 HITS.pool.root.1
[2025-10-14 08:40:26] -rw------- 1 boinc boinc   1781760 Oct 14 08:38 result.tar.gz
08:40:27 (3203857): run_atlas exited; CPU time 39743.770204
08:40:27 (3203857): called boinc_finish(0)

</stderr_txt>
]]>

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