Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:24:55 (3127655): wrapper (7.7.26015): starting
04:24:55 (3127655): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 04:24:55] Arguments: --nthreads 3
[2025-10-13 04:24:55] Threads: 3
[2025-10-13 04:24:55] Checking for CVMFS
[2025-10-13 04:24:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:24:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:24:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:24:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:24:55] 2.9.2.0 1621947 5041 87288 151645 1 57 24332837 36864000 0 130560 0 3932435 99.987 302459 1177 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 04:24:55] CVMFS is ok
[2025-10-13 04:24:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:24:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:24:55] Further information can be found at the LHC@home message board.
[2025-10-13 04:24:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:24:55] Checking for apptainer binary...
[2025-10-13 04:24:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:24:55] Running /usr/bin/apptainer --version
[2025-10-13 04:24:55] apptainer version 1.4.1-1.1
[2025-10-13 04:24:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:24:55] thA305
[2025-10-13 04:24:55] apptainer works
[2025-10-13 04:24:55] Set ATHENA_PROC_NUMBER=3
[2025-10-13 04:24:55] Set ATHENA_CORE_NUMBER=3
[2025-10-13 04:24:55] Starting ATLAS job with PandaID=6839867474
[2025-10-13 04:24:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:50:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:50:14] 2025-10-13 03:49:56,234 | INFO     | cat /etc/os-release:
[2025-10-13 05:50:14] NAME="CentOS Linux"
[2025-10-13 05:50:14] VERSION="7 (Core)"
[2025-10-13 05:50:14] ID="centos"
[2025-10-13 05:50:14] ID_LIKE="rhel fedora"
[2025-10-13 05:50:14] VERSION_ID="7"
[2025-10-13 05:50:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:50:14] ANSI_COLOR="0;31"
[2025-10-13 05:50:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:50:14] HOME_URL="https://www.centos.org/"
[2025-10-13 05:50:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:50:14] 
[2025-10-13 05:50:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:50:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:50:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:50:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:50:14] 
[2025-10-13 05:50:14] 2025-10-13 03:49:56,235 | INFO     | ***************************************
[2025-10-13 05:50:14] 2025-10-13 03:49:56,736 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:50:14] 2025-10-13 03:49:56,749 | INFO     | sufficient remaining disk space (235295211520 B)
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | INFO     | update_server=False
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:50:14] 2025-10-13 03:49:56,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 03:49:56,933 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:50:14] 2025-10-13 03:49:56,933 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:50:14] 2025-10-13 03:49:56,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 03:49:56,933 | INFO     | will abort loop
[2025-10-13 05:50:14] 2025-10-13 03:49:57,066 | INFO     | all job control threads have been joined
[2025-10-13 05:50:14] 2025-10-13 03:49:57,360 | INFO     | all data control threads have been joined
[2025-10-13 05:50:14] 2025-10-13 03:49:57,474 | INFO     | all payload control threads have been joined
[2025-10-13 05:50:14] 2025-10-13 03:49:57,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 03:49:57,756 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:57,766 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:57,939 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,045 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,072 | INFO     | [job] control thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,366 | INFO     | [data] control thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,479 | INFO     | [payload] control thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,569 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,669 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:58,756 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:59,199 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:59,201 | INFO     | [job] validate thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:59,201 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:49:59,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:50:14] 2025-10-13 03:50:00,729 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:50:01,662 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:50:07,099 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:50:14] 2025-10-13 03:50:07,497 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:50:14] 2025-10-13 03:50:08,498 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:50:14] 2025-10-13 03:50:09,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139642049173312)>', '<ExcThread(monitor, started 139641692858112)>']
[2025-10-13 05:50:14] 2025-10-13 03:50:09,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:50:14] 2025-10-13 03:50:09,820 | INFO     | [monitor] control thread has ended
[2025-10-13 05:50:14] 2025-10-13 03:50:14,101 | INFO     | all workflow threads have been joined
[2025-10-13 05:50:14] 2025-10-13 03:50:14,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:50:14] 2025-10-13 03:50:14,102 | INFO     | traces error code: 0
[2025-10-13 05:50:14] 2025-10-13 03:50:14,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:50:14] 2025-10-13 03:50:14,155 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:50:14] 2025-10-13 03:50:14,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:50:14] 2025-10-13 03:50:14,160 [wrapper] pilotpid: 3131369
[2025-10-13 05:50:14] 2025-10-13 03:50:14,162 [wrapper] Pilot exit status: 0
[2025-10-13 05:50:14] 2025-10-13 03:50:14,169 [wrapper] pandaids: 6839867474
[2025-10-13 05:50:14] 2025-10-13 03:50:14,187 [wrapper] cleanup supervisor_pilot 3149692 3131370
[2025-10-13 05:50:14] 2025-10-13 03:50:14,189 [wrapper] Test setup, not cleaning
[2025-10-13 05:50:14] 2025-10-13 03:50:14,191 [wrapper] apfmon messages muted
[2025-10-13 05:50:14] 2025-10-13 03:50:14,193 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:50:14] 2025-10-13 03:50:14,195 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:50:14]  *** Error codes and diagnostics ***
[2025-10-13 05:50:14]     "exeErrorCode": 0,
[2025-10-13 05:50:14]     "exeErrorDiag": "",
[2025-10-13 05:50:14]     "pilotErrorCode": 0,
[2025-10-13 05:50:14]     "pilotErrorDiag": "",
[2025-10-13 05:50:14]  *** Listing of results directory ***
[2025-10-13 05:50:14] total 412896
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:38 pilot3.tar.gz
[2025-10-13 05:50:14] -rwx------ 1 boinc boinc     36292 Oct 12 12:53 runpilot2-wrapper.sh
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:53 queuedata.json
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:50:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:24 run_atlas
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:24 job.xml
[2025-10-13 05:50:14] -rw-r--r-- 2 boinc boinc 219497559 Oct 13 04:24 EVNT.46676267._003633.pool.root.1
[2025-10-13 05:50:14] -rw-r--r-- 2 boinc boinc    569676 Oct 13 04:24 input.tar.gz
[2025-10-13 05:50:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:24 start_atlas.sh
[2025-10-13 05:50:14] drwxrwx--x 2 boinc boinc      4096 Oct 13 04:24 shared
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:24 boinc_setup_complete
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc      6439 Oct 13 04:24 init_data.xml
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:24 boinc_lockfile
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc      2550 Oct 13 04:24 pandaJob.out
[2025-10-13 05:50:14] -rw------- 1 boinc boinc    974373 Oct 13 04:25 agis_schedconf.cvmfs.json
[2025-10-13 05:50:14] -rw------- 1 boinc boinc   1560580 Oct 13 04:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:50:14] drwx------ 5 boinc boinc      4096 Oct 13 04:25 pilot3
[2025-10-13 05:50:14] -rw------- 1 boinc boinc 197408598 Oct 13 05:49 HITS.46676269._076353.pool.root.1
[2025-10-13 05:50:14] -rw------- 1 boinc boinc        95 Oct 13 05:49 pilot_heartbeat.json
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:49 boinc_task_state.xml
[2025-10-13 05:50:14] -rw------- 1 boinc boinc      1023 Oct 13 05:49 memory_monitor_summary.json
[2025-10-13 05:50:14] -rw------- 1 boinc boinc    255322 Oct 13 05:49 log.46676269._076353.job.log.tgz.1
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:49 boinc_mmap_file
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:49 wrapper_checkpoint.txt
[2025-10-13 05:50:14] -rw------- 1 boinc boinc      7767 Oct 13 05:49 heartbeat.json
[2025-10-13 05:50:14] -rw------- 1 boinc boinc      4814 Oct 13 05:50 pilotlog.txt
[2025-10-13 05:50:14] -rw------- 1 boinc boinc    746299 Oct 13 05:50 log.46676269._076353.job.log.1
[2025-10-13 05:50:14] -rw------- 1 boinc boinc       357 Oct 13 05:50 output.list
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:50 runtime_log
[2025-10-13 05:50:14] -rw------- 1 boinc boinc   1024000 Oct 13 05:50 result.tar.gz
[2025-10-13 05:50:14] -rw------- 1 boinc boinc       658 Oct 13 05:50 wXcNDm3s8R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsfTMDmkV3v7n.diag
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc      8777 Oct 13 05:50 runtime_log.err
[2025-10-13 05:50:14] -rw-r--r-- 1 boinc boinc      9033 Oct 13 05:50 stderr.txt
[2025-10-13 05:50:14] HITS file was successfully produced:
[2025-10-13 05:50:14] -rw------- 1 boinc boinc 197408598 Oct 13 05:49 shared/HITS.pool.root.1
[2025-10-13 05:50:14]  *** Contents of shared directory: ***
[2025-10-13 05:50:14] total 408724
[2025-10-13 05:50:14] -rw-r--r-- 2 boinc boinc 219497559 Oct 13 04:24 ATLAS.root_0
[2025-10-13 05:50:14] -rw-r--r-- 2 boinc boinc    569676 Oct 13 04:24 input.tar.gz
[2025-10-13 05:50:14] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:24 start_atlas.sh
[2025-10-13 05:50:14] -rw------- 1 boinc boinc 197408598 Oct 13 05:49 HITS.pool.root.1
[2025-10-13 05:50:14] -rw------- 1 boinc boinc   1024000 Oct 13 05:50 result.tar.gz
05:50:15 (3127655): run_atlas exited; CPU time 14431.150617
05:50:15 (3127655): called boinc_finish(0)

</stderr_txt>
]]>

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