Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:40 (882466): wrapper (7.7.26015): starting
12:19:40 (882466): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:19:40] Arguments: --nthreads 12
[2025-10-12 12:19:40] Threads: 12
[2025-10-12 12:19:40] Checking for CVMFS
[2025-10-12 12:19:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:19:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:19:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:19:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:19:41] 2.13.2.0 3683012 13019 148364 151625 1 195 37505665 40960001 5793 16776704 0 148519299 99.862 55079827 32592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 12:19:41] CVMFS is ok
[2025-10-12 12:19:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:19:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:19:41] Further information can be found at the LHC@home message board.
[2025-10-12 12:19:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:19:41] Checking for apptainer binary...
[2025-10-12 12:19:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:19:41] Running /usr/bin/apptainer --version
[2025-10-12 12:19:41] apptainer version 1.4.3-1.el9
[2025-10-12 12:19:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:19:41] c8-7-4.aglt2.org
[2025-10-12 12:19:41] apptainer works
[2025-10-12 12:19:41] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:19:41] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:19:41] Starting ATLAS job with PandaID=6839592078
[2025-10-12 12:19:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:50:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:50:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839592078/log.46676269._073180.job.log.tgz.1
[2025-10-12 12:50:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/8b/log.46676269._073180.job.log.tgz.1
[2025-10-12 12:50:22]  workdir=None
[2025-10-12 12:50:22] ]
[2025-10-12 12:50:22] 2025-10-12 16:49:39,708 | INFO     | transferring file log.46676269._073180.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839592078/log.46676269._073180.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:50:22] 2025-10-12 16:49:39,708 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839592078/log.46676269._073180.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._073180.job
[2025-10-12 12:50:22] 2025-10-12 16:49:39,718 | INFO     | adding to output.list: log.46676269._073180.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a5/8b/log.46676269._073180.job.log.tg
[2025-10-12 12:50:22] 2025-10-12 16:49:39,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:50:22] 2025-10-12 16:49:39,719 | INFO     | summary of transferred files:
[2025-10-12 12:50:22] 2025-10-12 16:49:39,719 | INFO     |  -- lfn=log.46676269._073180.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:50:22] 2025-10-12 16:49:39,719 | INFO     | stage-out finished correctly
[2025-10-12 12:50:22] 2025-10-12 16:49:39,891 | INFO     | time since job start (1791s) is within the limit (172800.0s)
[2025-10-12 12:50:22] 2025-10-12 16:49:41,897 | INFO     | time since job start (1793s) is within the limit (172800.0s)
[2025-10-12 12:50:22] 2025-10-12 16:49:43,152 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:50:22] 2025-10-12 16:49:43,323 | WARNING  | process 893789 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:50:22] 2025-10-12 16:49:43,323 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839592078/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:50:22] 2025-10-12 16:49:43,532 | INFO     | number of running child processes to parent process 893789: 1
[2025-10-12 12:50:22] 2025-10-12 16:49:43,532 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:50:22] 2025-10-12 16:49:43,902 | INFO     | time since job start (1795s) is within the limit (172800.0s)
[2025-10-12 12:50:22] 2025-10-12 16:49:45,508 [wrapper] supervise_pilot (15 min periods counter: 3)
[2025-10-12 12:50:22] 2025-10-12 16:49:45,631 | INFO     | job 6839592078 has state=finished
[2025-10-12 12:50:22] 2025-10-12 16:49:45,631 | INFO     | preparing for final server update for job 6839592078 in state='finished'
[2025-10-12 12:50:22] 2025-10-12 16:49:45,632 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:50:22] 2025-10-12 16:49:45,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:50:22] 2025-10-12 16:49:45,632 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:50:22] 2025-10-12 16:49:45,632 | INFO     | job 6839592078 has finished - writing final server update
[2025-10-12 12:50:22] 2025-10-12 16:49:45,632 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:50:22] 2025-10-12 16:49:45,632 | INFO     | executing command: lscpu
[2025-10-12 12:50:22] 2025-10-12 16:49:45,685 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:50:22] 2025-10-12 16:49:45,908 | INFO     | time since job start (1797s) is within the limit (172800.0s)
[2025-10-12 12:50:22] 2025-10-12 16:49:46,034 | INFO     | monitor loop #136: job 0:6839592078 is in state 'finished'
[2025-10-12 12:50:22] 2025-10-12 16:49:46,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:50:22] 2025-10-12 16:49:47,914 | INFO     | time since job start (1799s) is within the limit (172800.0s)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,414 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 12:50:22] 2025-10-12 16:49:48,432 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3516.5770312499926
[2025-10-12 12:50:22] 2025-10-12 16:49:48,458 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839592078/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,458 | INFO     | extracted standard info from prmon json
[2025-10-12 12:50:22] 2025-10-12 16:49:48,458 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:50:22] 2025-10-12 16:49:48,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:50:22] 2025-10-12 16:49:48,458 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:50:22] 2025-10-12 16:49:48,458 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | sum of square deviations: 3294945.5
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | sum of deviations: -162992640.5
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | mean x: 1760286954.5
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | mean y: 2385841.3181818184
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | -- intersect: 87079340149.56345
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | intersect: 87079340149.56345
[2025-10-12 12:50:22] 2025-10-12 16:49:48,459 | INFO     | chi2: 0.0029542311370015346
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | -- intersect: 87079340149.56345
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | current memory leak: -49.47 B/s (using 22 data points, chi2=0.00)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | could have reported an average CPU frequency of 3523 MHz (4 samples)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | ..............................
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . Timing measurements:
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . get job = 0 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . initial setup = 3 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . payload setup = 3 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . stage-in = 0 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . payload execution = 1769 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . stage-out = 0 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | . log creation = 0 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,460 | INFO     | ..............................
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | 
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | job summary report
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | --------------------------------------------------
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | PanDA job id: 6839592078
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | task id: 46676269
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | errors: (none)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | pilot state: finished 
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | transexitcode: 0
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | exeerrorcode: 0
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | exeerrordiag: 
[2025-10-12 12:50:22] 2025-10-12 16:49:48,516 | INFO     | exitcode: 0
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | exitmsg: OK
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | cpuconsumptiontime: 19127 s
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | nevents: 400
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | neventsw: 0
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | pid: 893789
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | pgrp: 893789
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | corecount: 12
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | event service: False
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | sizes: {0: 2348743, 3: 2349119, 11: 2349147, 1776: 2374042, 1777: 2383040, 1780: 2383096, 1786: 2383418}
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | --------------------------------------------------
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | 
[2025-10-12 12:50:22] 2025-10-12 16:49:48,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:50:22] 2025-10-12 16:49:48,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | job 6839592078 has completed (purged errors)
[2025-10-12 12:50:22] 2025-10-12 16:49:48,534 | INFO     | overall cleanup function is called
[2025-10-12 12:50:22] 2025-10-12 16:49:49,343 | INFO     | PID=886265 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:50:22] 2025-10-12 16:49:49,344 | INFO     | .. there are 10 such processes running
[2025-10-12 12:50:22] 2025-10-12 16:49:49,541 | INFO     | --- collectZombieJob: --- 10, [893789]
[2025-10-12 12:50:22] 2025-10-12 16:49:49,541 | INFO     | zombie collector waiting for pid 893789
[2025-10-12 12:50:22] 2025-10-12 16:49:49,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:50:22] 2025-10-12 16:49:49,541 | INFO     | collected zombie processes
[2025-10-12 12:50:22] 2025-10-12 16:49:49,541 | INFO     | will attempt to kill all subprocesses of pid=893789
[2025-10-12 12:50:22] 2025-10-12 16:49:49,752 | INFO     | process IDs to be killed: [893789] (in reverse order)
[2025-10-12 12:50:22] 2025-10-12 16:49:49,841 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:50:22] 2025-10-12 16:49:49,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:50:22] 2025-10-12 16:49:49,853 | INFO     | did not find any defunct processes belonging to 893789
[2025-10-12 12:50:22] 2025-10-12 16:49:49,861 | INFO     | did not find any defunct processes belonging to 893789
[2025-10-12 12:50:22] 2025-10-12 16:49:49,861 | INFO     | ready for new job
[2025-10-12 12:50:22] 2025-10-12 16:49:49,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:50:22] 2025-10-12 16:49:49,862 | INFO     | ***************************************
[2025-10-12 12:50:22] 2025-10-12 16:49:49,862 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:50:22] 2025-10-12 16:49:49,862 | INFO     | ***************************************
[2025-10-12 12:50:22] 2025-10-12 16:49:49,862 | INFO     | 
[2025-10-12 12:50:22] 2025-10-12 16:49:49,877 | INFO     | architecture information:
[2025-10-12 12:50:22] 2025-10-12 16:49:49,877 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:50:22] 2025-10-12 16:49:49,888 | INFO     | cat /etc/os-release:
[2025-10-12 12:50:22] NAME="CentOS Linux"
[2025-10-12 12:50:22] VERSION="7 (Core)"
[2025-10-12 12:50:22] ID="centos"
[2025-10-12 12:50:22] ID_LIKE="rhel fedora"
[2025-10-12 12:50:22] VERSION_ID="7"
[2025-10-12 12:50:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:50:22] ANSI_COLOR="0;31"
[2025-10-12 12:50:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:50:22] HOME_URL="https://www.centos.org/"
[2025-10-12 12:50:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:50:22] 
[2025-10-12 12:50:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:50:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:50:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:50:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:50:22] 
[2025-10-12 12:50:22] 2025-10-12 16:49:49,888 | INFO     | ***************************************
[2025-10-12 12:50:22] 2025-10-12 16:49:50,391 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:50:22] 2025-10-12 16:49:50,400 | INFO     | sufficient remaining disk space (167476461568 B)
[2025-10-12 12:50:22] 2025-10-12 16:49:50,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:50:22] 2025-10-12 16:49:50,400 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:50:22] 2025-10-12 16:49:50,400 | INFO     | update_server=False
[2025-10-12 12:50:22] 2025-10-12 16:49:50,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:50:22] 2025-10-12 16:49:50,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:50:22] 2025-10-12 16:49:50,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:50:22] 2025-10-12 16:49:50,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:50:22] 2025-10-12 16:49:50,401 | INFO     | aborting loop
[2025-10-12 12:50:22] 2025-10-12 16:49:50,918 | INFO     | all payload control threads have been joined
[2025-10-12 12:50:22] 2025-10-12 16:49:50,925 | INFO     | all job control threads have been joined
[2025-10-12 12:50:22] 2025-10-12 16:49:50,931 | INFO     | all data control threads have been joined
[2025-10-12 12:50:22] 2025-10-12 16:49:51,161 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:50:22] 2025-10-12 16:49:51,406 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,407 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,407 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,611 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,654 | INFO     | [job] validate thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,701 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,751 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,885 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,923 | INFO     | [payload] control thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,931 | INFO     | [job] control thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:51,936 | INFO     | [data] control thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:52,407 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:52,469 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:52,978 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:49:53,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:50:22] 2025-10-12 16:49:57,717 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:50:01,349 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:50:22] 2025-10-12 16:50:02,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:50:22] 2025-10-12 16:50:02,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134698084160)>', '<ExcThread(monitor, started 140133743441664)>']
[2025-10-12 12:50:22] 2025-10-12 16:50:07,740 | INFO     | all workflow threads have been joined
[2025-10-12 12:50:22] 2025-10-12 16:50:07,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:50:22] 2025-10-12 16:50:07,741 | INFO     | traces error code: 0
[2025-10-12 12:50:22] 2025-10-12 16:50:07,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | INFO     | PID=886265 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | INFO     | .. there are 9 such processes running
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:50:22] 2025-10-12 16:50:21,853 | INFO     | [monitor] control thread has ended
[2025-10-12 12:50:22] 2025-10-12 16:50:21,938 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:50:22] 2025-10-12 16:50:21,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:50:22] 2025-10-12 16:50:21,942 [wrapper] pilotpid: 886265
[2025-10-12 12:50:22] 2025-10-12 16:50:21,944 [wrapper] Pilot exit status: 0
[2025-10-12 12:50:22] 2025-10-12 16:50:21,949 [wrapper] pandaids: 6839592078
[2025-10-12 12:50:22] 2025-10-12 16:50:22,012 [wrapper] cleanup supervisor_pilot 1095866 886266
[2025-10-12 12:50:22] 2025-10-12 16:50:22,014 [wrapper] Test setup, not cleaning
[2025-10-12 12:50:22] 2025-10-12 16:50:22,016 [wrapper] apfmon messages muted
[2025-10-12 12:50:22] 2025-10-12 16:50:22,018 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:50:22] 2025-10-12 16:50:22,020 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:50:22]  *** Error codes and diagnostics ***
[2025-10-12 12:50:22]     "exeErrorCode": 0,
[2025-10-12 12:50:22]     "exeErrorDiag": "",
[2025-10-12 12:50:22]     "pilotErrorCode": 0,
[2025-10-12 12:50:22]     "pilotErrorDiag": "",
[2025-10-12 12:50:22]  *** Listing of results directory ***
[2025-10-12 12:50:22] total 418180
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:44 pilot3.tar.gz
[2025-10-12 12:50:22] -rwx------. 1 boincer umatlas     36292 Oct 12 02:52 runpilot2-wrapper.sh
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:52 queuedata.json
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:50:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:19 run_atlas
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:19 job.xml
[2025-10-12 12:50:22] -rw-r--r--. 2 boincer umatlas 219541246 Oct 12 12:19 EVNT.46676267._002401.pool.root.1
[2025-10-12 12:50:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:19 start_atlas.sh
[2025-10-12 12:50:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:19 shared
[2025-10-12 12:50:22] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 12:19 input.tar.gz
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:19 boinc_lockfile
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 12:19 pandaJob.out
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas    975528 Oct 12 12:19 agis_schedconf.cvmfs.json
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:50:22] drwx------. 5 boincer umatlas      4096 Oct 12 12:19 pilot3
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas      7164 Oct 12 12:47 init_data.xml
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas 203505243 Oct 12 12:49 HITS.46676269._073180.pool.root.1
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas       529 Oct 12 12:49 boinc_task_state.xml
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas        95 Oct 12 12:49 pilot_heartbeat.json
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas      1029 Oct 12 12:49 memory_monitor_summary.json
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas    342356 Oct 12 12:49 log.46676269._073180.job.log.tgz.1
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas      7769 Oct 12 12:49 heartbeat.json
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas        27 Oct 12 12:50 wrapper_checkpoint.txt
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:50 boinc_mmap_file
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas       821 Oct 12 12:50 pilotlog.txt
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas    295141 Oct 12 12:50 log.46676269._073180.job.log.1
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas       357 Oct 12 12:50 output.list
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:50 runtime_log
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas    655360 Oct 12 12:50 result.tar.gz
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas       649 Oct 12 12:50 zlzNDmn74R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcPTMDmoNs1So.diag
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 12:50 runtime_log.err
[2025-10-12 12:50:22] -rw-r--r--. 1 boincer umatlas     22292 Oct 12 12:50 stderr.txt
[2025-10-12 12:50:22] HITS file was successfully produced:
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas 203505243 Oct 12 12:49 shared/HITS.pool.root.1
[2025-10-12 12:50:22]  *** Contents of shared directory: ***
[2025-10-12 12:50:22] total 414352
[2025-10-12 12:50:22] -rw-r--r--. 2 boincer umatlas 219541246 Oct 12 12:19 ATLAS.root_0
[2025-10-12 12:50:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:19 start_atlas.sh
[2025-10-12 12:50:22] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 12:19 input.tar.gz
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas 203505243 Oct 12 12:49 HITS.pool.root.1
[2025-10-12 12:50:22] -rw-------. 1 boincer umatlas    655360 Oct 12 12:50 result.tar.gz
12:50:24 (882466): run_atlas exited; CPU time 19158.576757
12:50:24 (882466): called boinc_finish(0)

</stderr_txt>
]]>

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