Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:58:53 (436581): wrapper (7.7.26015): starting
11:58:53 (436581): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:58:53] Arguments: --nthreads 8
[2025-10-12 11:58:53] Threads: 8
[2025-10-12 11:58:53] Checking for CVMFS
[2025-10-12 11:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:58:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:58:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:58:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:58:54] 2.13.2.0 1602499 124019 172844 151625 2 675 23095209 40960000 27876 16776704 0 304611166 99.733 202666810 35264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:58:54] CVMFS is ok
[2025-10-12 11:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:58:54] Further information can be found at the LHC@home message board.
[2025-10-12 11:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:58:54] Checking for apptainer binary...
[2025-10-12 11:58:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:58:54] Running /usr/bin/apptainer --version
[2025-10-12 11:58:54] apptainer version 1.4.3-1.el9
[2025-10-12 11:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:58:54] c-212-17.aglt2.org
[2025-10-12 11:58:54] apptainer works
[2025-10-12 11:58:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:58:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:58:55] Starting ATLAS job with PandaID=6839988407
[2025-10-12 11:58:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:42:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:42:06] 2025-10-12 20:41:05,682 | INFO     | current chi2=0.3912738151948439 (change=62.049889042066006 %)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,683 | INFO     | sum of square deviations: 5202427998.984375
[2025-10-12 16:42:06] 2025-10-12 20:41:05,684 | INFO     | sum of deviations: 10635085806.007812
[2025-10-12 16:42:06] 2025-10-12 20:41:05,684 | INFO     | mean x: 1760293825.7578125
[2025-10-12 16:42:06] 2025-10-12 20:41:05,684 | INFO     | mean y: 2498176.87109375
[2025-10-12 16:42:06] 2025-10-12 20:41:05,684 | INFO     | -- intersect: -3595990045.2388163
[2025-10-12 16:42:06] 2025-10-12 20:41:05,684 | INFO     | intersect: -3595990045.2388163
[2025-10-12 16:42:06] 2025-10-12 20:41:05,685 | INFO     | chi2: 0.18663672328428946
[2025-10-12 16:42:06] 2025-10-12 20:41:05,685 | INFO     | current chi2=0.18663672328428946 (change=52.30022658394624 %)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,685 | INFO     | sum of square deviations: 4903515676.16733
[2025-10-12 16:42:06] 2025-10-12 20:41:05,694 | INFO     | sum of deviations: -392989837.98405993
[2025-10-12 16:42:06] 2025-10-12 20:41:05,694 | INFO     | mean x: 1760293978.258964
[2025-10-12 16:42:06] 2025-10-12 20:41:05,695 | INFO     | mean y: 2503798.215139442
[2025-10-12 16:42:06] 2025-10-12 20:41:05,695 | INFO     | -- intersect: 143581688.24464816
[2025-10-12 16:42:06] 2025-10-12 20:41:05,695 | INFO     | intersect: 143581688.24464816
[2025-10-12 16:42:06] 2025-10-12 20:41:05,695 | INFO     | chi2: 0.1213155419723311
[2025-10-12 16:42:06] 2025-10-12 20:41:05,695 | INFO     | current chi2=0.1213155419723311 (change=34.99910422905335 %)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,695 | INFO     | sum of square deviations: 4616262558.325226
[2025-10-12 16:42:06] 2025-10-12 20:41:05,706 | INFO     | sum of deviations: -11453864392.999996
[2025-10-12 16:42:06] 2025-10-12 20:41:05,706 | INFO     | mean x: 1760294130.7642276
[2025-10-12 16:42:06] 2025-10-12 20:41:05,706 | INFO     | mean y: 2509678.5
[2025-10-12 16:42:06] 2025-10-12 20:41:05,706 | INFO     | -- intersect: 4370149086.0994835
[2025-10-12 16:42:06] 2025-10-12 20:41:05,706 | INFO     | intersect: 4370149086.0994835
[2025-10-12 16:42:06] 2025-10-12 20:41:05,706 | INFO     | chi2: 0.04635837091705024
[2025-10-12 16:42:06] 2025-10-12 20:41:05,707 | INFO     | current chi2=0.04635837091705024 (change=61.786948182102364 %)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,707 | INFO     | sum of square deviations: 4340451515.468897
[2025-10-12 16:42:06] 2025-10-12 20:41:05,708 | INFO     | sum of deviations: -14787581006.651466
[2025-10-12 16:42:06] 2025-10-12 20:41:05,708 | INFO     | mean x: 1760294283.2697096
[2025-10-12 16:42:06] 2025-10-12 20:41:05,708 | INFO     | mean y: 2511493.979253112
[2025-10-12 16:42:06] 2025-10-12 20:41:05,708 | INFO     | -- intersect: 5999697320.528971
[2025-10-12 16:42:06] 2025-10-12 20:41:05,708 | INFO     | intersect: 5999697320.528971
[2025-10-12 16:42:06] 2025-10-12 20:41:05,709 | INFO     | chi2: 0.020146377468467615
[2025-10-12 16:42:06] 2025-10-12 20:41:05,709 | INFO     | current chi2=0.020146377468467615 (change=56.54209354225185 %)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,709 | INFO     | sum of square deviations: 4075849985.097479
[2025-10-12 16:42:06] 2025-10-12 20:41:05,718 | INFO     | sum of deviations: -13751578770.203392
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | mean x: 1760294435.7754238
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | mean y: 2510895.033898305
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | -- intersect: 5941597878.31931
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | intersect: 5941597878.31931
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | chi2: 0.020092477981873937
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | current chi2=0.020092477981873937 (change=0.26753934635663257 %)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,719 | INFO     | left removable region: 80
[2025-10-12 16:42:06] 2025-10-12 20:41:05,720 | INFO     | sum of square deviations: 2126831747.2684214
[2025-10-12 16:42:06] 2025-10-12 20:41:05,720 | INFO     | sum of deviations: 551018075.6052626
[2025-10-12 16:42:06] 2025-10-12 20:41:05,720 | INFO     | mean x: 1760295472.7736843
[2025-10-12 16:42:06] 2025-10-12 20:41:05,721 | INFO     | mean y: 2500584.9210526315
[2025-10-12 16:42:06] 2025-10-12 20:41:05,721 | INFO     | -- intersect: -453555530.0726062
[2025-10-12 16:42:06] 2025-10-12 20:41:05,721 | INFO     | intersect: -453555530.0726062
[2025-10-12 16:42:06] 2025-10-12 20:41:05,721 | INFO     | chi2: 0.0007664567863151519
[2025-10-12 16:42:06] 2025-10-12 20:41:05,721 | INFO     | -- intersect: -453555530.0726062
[2025-10-12 16:42:06] 2025-10-12 20:41:05,721 | INFO     | current memory leak: 0.26 B/s (using 190 data points, chi2=0.00)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,730 | INFO     | could have reported an average CPU frequency of 3129 MHz (13 samples)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | ..............................
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . Timing measurements:
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . get job = 0 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . initial setup = 5 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . payload setup = 12 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . stage-in = 0 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . payload execution = 16825 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . stage-out = 5 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | . log creation = 0 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,731 | INFO     | ..............................
[2025-10-12 16:42:06] 2025-10-12 20:41:05,890 | INFO     | 
[2025-10-12 16:42:06] 2025-10-12 20:41:05,891 | INFO     | job summary report
[2025-10-12 16:42:06] 2025-10-12 20:41:05,891 | INFO     | --------------------------------------------------
[2025-10-12 16:42:06] 2025-10-12 20:41:05,891 | INFO     | PanDA job id: 6839988407
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | task id: 46676269
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | errors: (none)
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | pilot state: finished 
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | transexitcode: 0
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | exeerrorcode: 0
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | exeerrordiag: 
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | exitcode: 0
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | exitmsg: OK
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | cpuconsumptiontime: 37075 s
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | nevents: 400
[2025-10-12 16:42:06] 2025-10-12 20:41:05,892 | INFO     | neventsw: 0
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | pid: 449874
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | pgrp: 449874
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | corecount: 8
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | event service: False
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | sizes: {0: 2348857, 11: 2348857, 12: 2349147, 22: 2349175, 16843: 2381203, 16844: 2381202, 16850: 2390384, 16853: 2390440, 16862: 2390634}
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | --------------------------------------------------
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | 
[2025-10-12 16:42:06] 2025-10-12 20:41:05,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 16:42:06] 2025-10-12 20:41:05,975 | INFO     | time since job start (16897s) is within the limit (172800.0s)
[2025-10-12 16:42:06] 2025-10-12 20:41:06,009 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | job 6839988407 has completed (purged errors)
[2025-10-12 16:42:06] 2025-10-12 20:41:06,011 | INFO     | overall cleanup function is called
[2025-10-12 16:42:06] 2025-10-12 20:41:07,060 | INFO     | --- collectZombieJob: --- 10, [449874]
[2025-10-12 16:42:06] 2025-10-12 20:41:07,060 | INFO     | zombie collector waiting for pid 449874
[2025-10-12 16:42:06] 2025-10-12 20:41:07,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:42:06] 2025-10-12 20:41:07,061 | INFO     | collected zombie processes
[2025-10-12 16:42:06] 2025-10-12 20:41:07,061 | INFO     | will attempt to kill all subprocesses of pid=449874
[2025-10-12 16:42:06] 2025-10-12 20:41:08,421 | INFO     | process IDs to be killed: [449874] (in reverse order)
[2025-10-12 16:42:06] 2025-10-12 20:41:08,571 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:42:06] 2025-10-12 20:41:08,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:42:06] 2025-10-12 20:41:08,594 | INFO     | did not find any defunct processes belonging to 449874
[2025-10-12 16:42:06] 2025-10-12 20:41:08,621 | INFO     | did not find any defunct processes belonging to 449874
[2025-10-12 16:42:06] 2025-10-12 20:41:08,621 | INFO     | ready for new job
[2025-10-12 16:42:06] 2025-10-12 20:41:08,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:42:06] 2025-10-12 20:41:08,648 | INFO     | ***************************************
[2025-10-12 16:42:06] 2025-10-12 20:41:08,648 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:42:06] 2025-10-12 20:41:08,648 | INFO     | ***************************************
[2025-10-12 16:42:06] 2025-10-12 20:41:08,648 | INFO     | 
[2025-10-12 16:42:06] 2025-10-12 20:41:08,696 | INFO     | architecture information:
[2025-10-12 16:42:06] 2025-10-12 20:41:08,701 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:42:06] 2025-10-12 20:41:08,753 | INFO     | cat /etc/os-release:
[2025-10-12 16:42:06] NAME="CentOS Linux"
[2025-10-12 16:42:06] VERSION="7 (Core)"
[2025-10-12 16:42:06] ID="centos"
[2025-10-12 16:42:06] ID_LIKE="rhel fedora"
[2025-10-12 16:42:06] VERSION_ID="7"
[2025-10-12 16:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:42:06] ANSI_COLOR="0;31"
[2025-10-12 16:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:42:06] HOME_URL="https://www.centos.org/"
[2025-10-12 16:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:42:06] 
[2025-10-12 16:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:42:06] 
[2025-10-12 16:42:06] 2025-10-12 20:41:08,753 | INFO     | ***************************************
[2025-10-12 16:42:06] 2025-10-12 20:41:09,257 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 16:42:06] 2025-10-12 20:41:09,291 | INFO     | sufficient remaining disk space (127356895232 B)
[2025-10-12 16:42:06] 2025-10-12 20:41:09,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:42:06] 2025-10-12 20:41:09,292 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:42:06] 2025-10-12 20:41:09,292 | INFO     | update_server=False
[2025-10-12 16:42:06] 2025-10-12 20:41:09,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:42:06] 2025-10-12 20:41:09,294 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:42:06] 2025-10-12 20:41:09,295 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:42:06] 2025-10-12 20:41:09,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:42:06] 2025-10-12 20:41:09,295 | INFO     | will abort loop
[2025-10-12 16:42:06] 2025-10-12 20:41:09,501 | INFO     | all job control threads have been joined
[2025-10-12 16:42:06] 2025-10-12 20:41:09,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:42:06] 2025-10-12 20:41:09,902 | INFO     | all payload control threads have been joined
[2025-10-12 16:42:06] 2025-10-12 20:41:10,242 | INFO     | all data control threads have been joined
[2025-10-12 16:42:06] 2025-10-12 20:41:10,298 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,301 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,387 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,509 | INFO     | [job] control thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,756 | INFO     | [job] validate thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,795 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,796 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,801 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,804 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,909 | INFO     | [payload] control thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:10,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:42:06] 2025-10-12 20:41:11,265 | INFO     | [data] control thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:11,571 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:11,720 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:11,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:42:06] 2025-10-12 20:41:11,922 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:15,835 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:42:06] 2025-10-12 20:41:40,144 | INFO     | PID=440400 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 16:42:06] 2025-10-12 20:41:40,144 | INFO     | .. there are 24 such processes running
[2025-10-12 16:42:06] 2025-10-12 20:41:40,144 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:42:06] 2025-10-12 20:41:40,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:42:06] 2025-10-12 20:41:40,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:42:06] 2025-10-12 20:41:57,558 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:42:06] 2025-10-12 20:41:59,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711361607488)>', '<ExcThread(monitor, started 140710560913152)>']
[2025-10-12 16:42:06] 2025-10-12 20:42:00,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:42:06] 2025-10-12 20:42:00,284 | INFO     | [monitor] control thread has ended
[2025-10-12 16:42:06] 2025-10-12 20:42:04,475 | INFO     | all workflow threads have been joined
[2025-10-12 16:42:06] 2025-10-12 20:42:04,475 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:42:06] 2025-10-12 20:42:04,475 | INFO     | traces error code: 0
[2025-10-12 16:42:06] 2025-10-12 20:42:04,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:42:06] 2025-10-12 20:42:06,301 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:42:06] 2025-10-12 20:42:06,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:42:06] 2025-10-12 20:42:06,307 [wrapper] pilotpid: 440400
[2025-10-12 16:42:06] 2025-10-12 20:42:06,310 [wrapper] Pilot exit status: 0
[2025-10-12 16:42:06] 2025-10-12 20:42:06,324 [wrapper] pandaids: 6839988407
[2025-10-12 16:42:06] 2025-10-12 20:42:06,406 [wrapper] cleanup supervisor_pilot 1083128 440401
[2025-10-12 16:42:06] 2025-10-12 20:42:06,411 [wrapper] Test setup, not cleaning
[2025-10-12 16:42:06] 2025-10-12 20:42:06,414 [wrapper] apfmon messages muted
[2025-10-12 16:42:06] 2025-10-12 20:42:06,416 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:42:06] 2025-10-12 20:42:06,419 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:42:06]  *** Error codes and diagnostics ***
[2025-10-12 16:42:06]     "exeErrorCode": 0,
[2025-10-12 16:42:06]     "exeErrorDiag": "",
[2025-10-12 16:42:06]     "pilotErrorCode": 0,
[2025-10-12 16:42:06]     "pilotErrorDiag": "",
[2025-10-12 16:42:06]  *** Listing of results directory ***
[2025-10-12 16:42:06] total 406812
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:41 queuedata.json
[2025-10-12 16:42:06] -rwx------. 1 boincer umatlas     36292 Oct 12 08:42 runpilot2-wrapper.sh
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:42:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:58 run_atlas
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:58 job.xml
[2025-10-12 16:42:06] -rw-r--r--. 2 boincer umatlas 222903735 Oct 12 11:58 EVNT.46676267._003809.pool.root.1
[2025-10-12 16:42:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:58 start_atlas.sh
[2025-10-12 16:42:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:58 shared
[2025-10-12 16:42:06] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 11:58 input.tar.gz
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:58 boinc_lockfile
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 11:58 pandaJob.out
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas    975528 Oct 12 11:59 agis_schedconf.cvmfs.json
[2025-10-12 16:42:06] drwx------. 5 boincer umatlas      4096 Oct 12 11:59 pilot3
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas      6948 Oct 12 16:38 init_data.xml
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas 184253529 Oct 12 16:40 HITS.46676269._078500.pool.root.1
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas       530 Oct 12 16:40 boinc_task_state.xml
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas      1046 Oct 12 16:40 memory_monitor_summary.json
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas        95 Oct 12 16:40 pilot_heartbeat.json
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas    511335 Oct 12 16:40 log.46676269._078500.job.log.tgz.1
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas      7805 Oct 12 16:41 heartbeat.json
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:42 wrapper_checkpoint.txt
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas      5010 Oct 12 16:42 pilotlog.txt
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:42 boinc_mmap_file
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas   2248223 Oct 12 16:42 log.46676269._078500.job.log.1
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas       357 Oct 12 16:42 output.list
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:42 runtime_log
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas   2775040 Oct 12 16:42 result.tar.gz
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 16:42 runtime_log.err
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas       660 Oct 12 16:42 237NDm3ZAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmztTMDmQfhwUn.diag
[2025-10-12 16:42:06] -rw-r--r--. 1 boincer umatlas     21121 Oct 12 16:42 stderr.txt
[2025-10-12 16:42:06] HITS file was successfully produced:
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas 184253529 Oct 12 16:40 shared/HITS.pool.root.1
[2025-10-12 16:42:06]  *** Contents of shared directory: ***
[2025-10-12 16:42:06] total 400912
[2025-10-12 16:42:06] -rw-r--r--. 2 boincer umatlas 222903735 Oct 12 11:58 ATLAS.root_0
[2025-10-12 16:42:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:58 start_atlas.sh
[2025-10-12 16:42:06] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 11:58 input.tar.gz
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas 184253529 Oct 12 16:40 HITS.pool.root.1
[2025-10-12 16:42:06] -rw-------. 1 boincer umatlas   2775040 Oct 12 16:42 result.tar.gz
16:42:08 (436581): run_atlas exited; CPU time 37551.619754
16:42:08 (436581): called boinc_finish(0)

</stderr_txt>
]]>

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