Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:57:46 (19611): wrapper (7.7.26015): starting
11:57:46 (19611): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:57:46] Arguments: --nthreads 8
[2025-10-12 11:57:46] Threads: 8
[2025-10-12 11:57:46] Checking for CVMFS
[2025-10-12 11:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:57:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:57:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:57:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:57:47] 2.11.2.0 3643 1293 65268 151625 3 188 9827949 18432001 1833 130560 0 2084966 99.996 42406 32445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:57:47] CVMFS is ok
[2025-10-12 11:57:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:57:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:57:47] Further information can be found at the LHC@home message board.
[2025-10-12 11:57:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:57:47] Checking for apptainer binary...
[2025-10-12 11:57:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:57:47] Running /usr/bin/apptainer --version
[2025-10-12 11:57:47] apptainer version 1.3.2-1.el7
[2025-10-12 11:57:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:57:47] c-206-15.aglt2.org
[2025-10-12 11:57:47] apptainer works
[2025-10-12 11:57:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:57:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:57:47] Starting ATLAS job with PandaID=6839988037
[2025-10-12 11:57:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:05:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:05:23] 2025-10-12 19:04:22,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:05:23] 2025-10-12 19:04:22,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:05:23] 2025-10-12 19:04:22,704 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:05:23] 2025-10-12 19:04:22,704 | INFO     | sum of square deviations: 1900284932.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,705 | INFO     | sum of deviations: 26722305990.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,705 | INFO     | mean x: 1760290255.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,705 | INFO     | mean y: 2464930.5519125685
[2025-10-12 15:05:23] 2025-10-12 19:04:22,705 | INFO     | -- intersect: -24751199129.615
[2025-10-12 15:05:23] 2025-10-12 19:04:22,706 | INFO     | intersect: -24751199129.615
[2025-10-12 15:05:23] 2025-10-12 19:04:22,706 | INFO     | chi2: 1.4601160735444294
[2025-10-12 15:05:23] 2025-10-12 19:04:22,706 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 15:05:23] 2025-10-12 19:04:22,707 | INFO     | sum of deviations: 25760410958.999996
[2025-10-12 15:05:23] 2025-10-12 19:04:22,707 | INFO     | mean x: 1760290102.5
[2025-10-12 15:05:23] 2025-10-12 19:04:22,707 | INFO     | mean y: 2463962.6741573033
[2025-10-12 15:05:23] 2025-10-12 19:04:22,707 | INFO     | -- intersect: -25928120792.63571
[2025-10-12 15:05:23] 2025-10-12 19:04:22,707 | INFO     | intersect: -25928120792.63571
[2025-10-12 15:05:23] 2025-10-12 19:04:22,709 | INFO     | chi2: 1.4611872359045872
[2025-10-12 15:05:23] 2025-10-12 19:04:22,710 | INFO     | current chi2=1.4611872359045872 (change=-0.07336145252874055 %)
[2025-10-12 15:05:23] 2025-10-12 19:04:22,710 | INFO     | right removable region: 177
[2025-10-12 15:05:23] 2025-10-12 19:04:22,710 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 15:05:23] 2025-10-12 19:04:22,711 | INFO     | sum of deviations: -1499208773.0000002
[2025-10-12 15:05:23] 2025-10-12 19:04:22,711 | INFO     | mean x: 1760290407.5
[2025-10-12 15:05:23] 2025-10-12 19:04:22,711 | INFO     | mean y: 2493004.6853932585
[2025-10-12 15:05:23] 2025-10-12 19:04:22,711 | INFO     | -- intersect: 1511605842.6702838
[2025-10-12 15:05:23] 2025-10-12 19:04:22,711 | INFO     | intersect: 1511605842.6702838
[2025-10-12 15:05:23] 2025-10-12 19:04:22,712 | INFO     | chi2: 0.03718688493214492
[2025-10-12 15:05:23] 2025-10-12 19:04:22,712 | INFO     | current chi2=0.03718688493214492 (change=97.45315556715475 %)
[2025-10-12 15:05:23] 2025-10-12 19:04:22,712 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,713 | INFO     | sum of deviations: -4189073008.0000005
[2025-10-12 15:05:23] 2025-10-12 19:04:22,713 | INFO     | mean x: 1760290560.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,713 | INFO     | mean y: 2495816.768786127
[2025-10-12 15:05:23] 2025-10-12 19:04:22,713 | INFO     | -- intersect: 4595534118.726031
[2025-10-12 15:05:23] 2025-10-12 19:04:22,713 | INFO     | intersect: 4595534118.726031
[2025-10-12 15:05:23] 2025-10-12 19:04:22,714 | INFO     | chi2: 0.014121569612888074
[2025-10-12 15:05:23] 2025-10-12 19:04:22,714 | INFO     | current chi2=0.014121569612888074 (change=62.02540320692156 %)
[2025-10-12 15:05:23] 2025-10-12 19:04:22,714 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,715 | INFO     | sum of deviations: -3161512117.5
[2025-10-12 15:05:23] 2025-10-12 19:04:22,715 | INFO     | mean x: 1760290712.5
[2025-10-12 15:05:23] 2025-10-12 19:04:22,715 | INFO     | mean y: 2494653.625
[2025-10-12 15:05:23] 2025-10-12 19:04:22,715 | INFO     | -- intersect: 3787690604.6026263
[2025-10-12 15:05:23] 2025-10-12 19:04:22,715 | INFO     | intersect: 3787690604.6026263
[2025-10-12 15:05:23] 2025-10-12 19:04:22,715 | INFO     | chi2: 0.01348218649093876
[2025-10-12 15:05:23] 2025-10-12 19:04:22,716 | INFO     | current chi2=0.01348218649093876 (change=4.527705768385546 %)
[2025-10-12 15:05:23] 2025-10-12 19:04:22,716 | INFO     | left removable region: 30
[2025-10-12 15:05:23] 2025-10-12 19:04:22,716 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | sum of deviations: 1782706028.9999998
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | mean x: 1760290987.0
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | mean y: 2487454.7278911564
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | -- intersect: -3183571947.120478
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | intersect: -3183571947.120478
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | chi2: 0.00145582801170645
[2025-10-12 15:05:23] 2025-10-12 19:04:22,717 | INFO     | -- intersect: -3183571947.120478
[2025-10-12 15:05:23] 2025-10-12 19:04:22,718 | INFO     | current memory leak: 1.81 B/s (using 147 data points, chi2=0.00)
[2025-10-12 15:05:23] 2025-10-12 19:04:22,718 | INFO     | could have reported an average CPU frequency of 2487 MHz (10 samples)
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | ..............................
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . Timing measurements:
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . get job = 0 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . initial setup = 2 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . payload setup = 4 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . stage-in = 0 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . payload execution = 11147 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . stage-out = 1 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | . log creation = 0 s
[2025-10-12 15:05:23] 2025-10-12 19:04:22,719 | INFO     | ..............................
[2025-10-12 15:05:23] 2025-10-12 19:04:23,271 | INFO     | 
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | job summary report
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | --------------------------------------------------
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | PanDA job id: 6839988037
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | task id: 46676269
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | errors: (none)
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | pilot state: finished 
[2025-10-12 15:05:23] 2025-10-12 19:04:23,272 | INFO     | transexitcode: 0
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | exeerrorcode: 0
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | exeerrordiag: 
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | exitcode: 0
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | exitmsg: OK
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | cpuconsumptiontime: 84185 s
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | nevents: 400
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | neventsw: 0
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | pid: 29764
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | pgrp: 29764
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | corecount: 8
[2025-10-12 15:05:23] 2025-10-12 19:04:23,273 | INFO     | event service: False
[2025-10-12 15:05:23] 2025-10-12 19:04:23,274 | INFO     | sizes: {0: 2348624, 1: 2348879, 2: 2348879, 4: 2349169, 12: 2349197, 11156: 2378452, 11159: 2387450, 11162: 2387506, 11168: 2387700}
[2025-10-12 15:05:23] 2025-10-12 19:04:23,274 | INFO     | --------------------------------------------------
[2025-10-12 15:05:23] 2025-10-12 19:04:23,274 | INFO     | 
[2025-10-12 15:05:23] 2025-10-12 19:04:23,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 15:05:23] 2025-10-12 19:04:23,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:05:23] 2025-10-12 19:04:23,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,292 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:05:23] 2025-10-12 19:04:23,292 | INFO     | job 6839988037 has completed (purged errors)
[2025-10-12 15:05:23] 2025-10-12 19:04:23,292 | INFO     | overall cleanup function is called
[2025-10-12 15:05:23] 2025-10-12 19:04:24,551 | INFO     | --- collectZombieJob: --- 10, [29764]
[2025-10-12 15:05:23] 2025-10-12 19:04:24,551 | INFO     | zombie collector waiting for pid 29764
[2025-10-12 15:05:23] 2025-10-12 19:04:24,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:05:23] 2025-10-12 19:04:24,551 | INFO     | collected zombie processes
[2025-10-12 15:05:23] 2025-10-12 19:04:24,551 | INFO     | will attempt to kill all subprocesses of pid=29764
[2025-10-12 15:05:23] 2025-10-12 19:04:24,661 | INFO     | process IDs to be killed: [29764] (in reverse order)
[2025-10-12 15:05:23] 2025-10-12 19:04:24,697 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:05:23] 2025-10-12 19:04:24,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:05:23] 2025-10-12 19:04:24,700 | INFO     | did not find any defunct processes belonging to 29764
[2025-10-12 15:05:23] 2025-10-12 19:04:24,702 | INFO     | did not find any defunct processes belonging to 29764
[2025-10-12 15:05:23] 2025-10-12 19:04:24,702 | INFO     | ready for new job
[2025-10-12 15:05:23] 2025-10-12 19:04:24,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:05:23] 2025-10-12 19:04:24,704 | INFO     | ***************************************
[2025-10-12 15:05:23] 2025-10-12 19:04:24,704 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:05:23] 2025-10-12 19:04:24,704 | INFO     | ***************************************
[2025-10-12 15:05:23] 2025-10-12 19:04:24,704 | INFO     | 
[2025-10-12 15:05:23] 2025-10-12 19:04:24,705 | INFO     | architecture information:
[2025-10-12 15:05:23] 2025-10-12 19:04:24,705 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:05:23] 2025-10-12 19:04:24,714 | INFO     | cat /etc/os-release:
[2025-10-12 15:05:23] NAME="CentOS Linux"
[2025-10-12 15:05:23] VERSION="7 (Core)"
[2025-10-12 15:05:23] ID="centos"
[2025-10-12 15:05:23] ID_LIKE="rhel fedora"
[2025-10-12 15:05:23] VERSION_ID="7"
[2025-10-12 15:05:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:05:23] ANSI_COLOR="0;31"
[2025-10-12 15:05:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:05:23] HOME_URL="https://www.centos.org/"
[2025-10-12 15:05:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:05:23] 
[2025-10-12 15:05:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:05:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:05:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:05:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:05:23] 
[2025-10-12 15:05:23] 2025-10-12 19:04:24,715 | INFO     | ***************************************
[2025-10-12 15:05:23] 2025-10-12 19:04:25,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 15:05:23] 2025-10-12 19:04:25,229 | INFO     | sufficient remaining disk space (27877441536 B)
[2025-10-12 15:05:23] 2025-10-12 19:04:25,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:05:23] 2025-10-12 19:04:25,229 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:05:23] 2025-10-12 19:04:25,230 | INFO     | update_server=False
[2025-10-12 15:05:23] 2025-10-12 19:04:25,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:05:23] 2025-10-12 19:04:25,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:05:23] 2025-10-12 19:04:25,230 | INFO     | aborting loop
[2025-10-12 15:05:23] 2025-10-12 19:04:25,947 | INFO     | all job control threads have been joined
[2025-10-12 15:05:23] 2025-10-12 19:04:26,024 | INFO     | all data control threads have been joined
[2025-10-12 15:05:23] 2025-10-12 19:04:26,235 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,235 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,294 | INFO     | [job] validate thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,334 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,390 | INFO     | all payload control threads have been joined
[2025-10-12 15:05:23] 2025-10-12 19:04:26,568 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:05:23] 2025-10-12 19:04:26,766 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,870 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,953 | INFO     | [job] control thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:26,976 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:27,029 | INFO     | [data] control thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:27,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:05:23] 2025-10-12 19:04:27,395 | INFO     | [payload] control thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:27,510 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:27,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:05:23] 2025-10-12 19:04:28,706 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:28,818 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:31,226 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:35,338 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:05:23] 2025-10-12 19:04:36,344 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:05:23] 2025-10-12 19:04:55,565 | INFO     | PID=23313 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:05:23] 2025-10-12 19:04:55,565 | INFO     | .. there are 3 such processes running
[2025-10-12 15:05:23] 2025-10-12 19:04:55,566 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:05:23] 2025-10-12 19:04:55,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:05:23] 2025-10-12 19:04:55,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:05:23] 2025-10-12 19:05:17,033 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:05:23] 2025-10-12 19:05:17,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523491628864)>', '<ExcThread(monitor, started 140523033569024)>']
[2025-10-12 15:05:23] 2025-10-12 19:05:18,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:05:23] 2025-10-12 19:05:18,675 | INFO     | [monitor] control thread has ended
[2025-10-12 15:05:23] 2025-10-12 19:05:22,928 | INFO     | all workflow threads have been joined
[2025-10-12 15:05:23] 2025-10-12 19:05:22,929 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:05:23] 2025-10-12 19:05:22,929 | INFO     | traces error code: 0
[2025-10-12 15:05:23] 2025-10-12 19:05:22,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:05:23] 2025-10-12 19:05:23,027 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:05:23] 2025-10-12 19:05:23,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:05:23] 2025-10-12 19:05:23,032 [wrapper] pilotpid: 23313
[2025-10-12 15:05:23] 2025-10-12 19:05:23,034 [wrapper] Pilot exit status: 0
[2025-10-12 15:05:23] 2025-10-12 19:05:23,043 [wrapper] pandaids: 6839988037
[2025-10-12 15:05:23] 2025-10-12 19:05:23,074 [wrapper] cleanup supervisor_pilot 28008 23314
[2025-10-12 15:05:23] 2025-10-12 19:05:23,076 [wrapper] Test setup, not cleaning
[2025-10-12 15:05:23] 2025-10-12 19:05:23,078 [wrapper] apfmon messages muted
[2025-10-12 15:05:23] 2025-10-12 19:05:23,080 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:05:23] 2025-10-12 19:05:23,082 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:05:23]  *** Error codes and diagnostics ***
[2025-10-12 15:05:23]     "exeErrorCode": 0,
[2025-10-12 15:05:23]     "exeErrorDiag": "",
[2025-10-12 15:05:23]     "pilotErrorCode": 0,
[2025-10-12 15:05:23]     "pilotErrorDiag": "",
[2025-10-12 15:05:23]  *** Listing of results directory ***
[2025-10-12 15:05:23] total 416692
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 15:05:23] -rwx------ 1 boincer umatlas     36292 Oct 12 08:40 runpilot2-wrapper.sh
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:40 queuedata.json
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:05:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:57 run_atlas
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:57 job.xml
[2025-10-12 15:05:23] -rw-r--r-- 2 boincer umatlas 221161628 Oct 12 11:57 EVNT.46676267._003799.pool.root.1
[2025-10-12 15:05:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:57 start_atlas.sh
[2025-10-12 15:05:23] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:57 shared
[2025-10-12 15:05:23] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 11:57 input.tar.gz
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:57 boinc_lockfile
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 11:57 pandaJob.out
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas    975528 Oct 12 11:57 agis_schedconf.cvmfs.json
[2025-10-12 15:05:23] drwx------ 5 boincer umatlas      4096 Oct 12 11:57 pilot3
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas 197672303 Oct 12 15:03 HITS.46676269._078380.pool.root.1
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:03 boinc_task_state.xml
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas      1067 Oct 12 15:04 memory_monitor_summary.json
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas   1560580 Oct 12 15:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas    407418 Oct 12 15:04 log.46676269._078380.job.log.tgz.1
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas      7853 Oct 12 15:04 heartbeat.json
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 15:04 init_data.xml
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas        95 Oct 12 15:04 pilot_heartbeat.json
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:04 boinc_mmap_file
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:04 wrapper_checkpoint.txt
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas      4893 Oct 12 15:05 pilotlog.txt
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas   1571334 Oct 12 15:05 log.46676269._078380.job.log.1
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas       357 Oct 12 15:05 output.list
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:05 runtime_log
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas   1996800 Oct 12 15:05 result.tar.gz
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 15:05 runtime_log.err
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas       661 Oct 12 15:05 8sfMDm6XAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxojNDmQjixqm.diag
[2025-10-12 15:05:23] -rw-r--r-- 1 boincer umatlas     20878 Oct 12 15:05 stderr.txt
[2025-10-12 15:05:23] HITS file was successfully produced:
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas 197672303 Oct 12 15:03 shared/HITS.pool.root.1
[2025-10-12 15:05:23]  *** Contents of shared directory: ***
[2025-10-12 15:05:23] total 411552
[2025-10-12 15:05:23] -rw-r--r-- 2 boincer umatlas 221161628 Oct 12 11:57 ATLAS.root_0
[2025-10-12 15:05:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:57 start_atlas.sh
[2025-10-12 15:05:23] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 11:57 input.tar.gz
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas 197672303 Oct 12 15:03 HITS.pool.root.1
[2025-10-12 15:05:23] -rw------- 1 boincer umatlas   1996800 Oct 12 15:05 result.tar.gz
15:05:25 (19611): run_atlas exited; CPU time 84320.336322
15:05:25 (19611): called boinc_finish(0)

</stderr_txt>
]]>

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