Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:09 (3617973): wrapper (7.7.26015): starting
02:51:09 (3617973): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:51:09] Arguments: --nthreads 4
[2025-10-13 02:51:09] Threads: 4
[2025-10-13 02:51:09] Checking for CVMFS
[2025-10-13 02:51:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:51:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:51:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:51:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:51:09] 2.9.2.0 1850263 5088 97484 151642 1 57 28975972 36864001 0 130560 0 4519571 99.992 174711 700 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 02:51:09] CVMFS is ok
[2025-10-13 02:51:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:51:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:51:09] Further information can be found at the LHC@home message board.
[2025-10-13 02:51:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:51:09] Checking for apptainer binary...
[2025-10-13 02:51:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:51:09] Running /usr/bin/apptainer --version
[2025-10-13 02:51:09] apptainer version 1.4.1-1.1
[2025-10-13 02:51:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:51:09] thA309
[2025-10-13 02:51:09] apptainer works
[2025-10-13 02:51:09] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:51:09] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:51:09] Starting ATLAS job with PandaID=6840182199
[2025-10-13 02:51:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:03:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:03:38] 2025-10-13 02:03:07,616 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:03:38] 2025-10-13 02:03:07,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:03:38] 2025-10-13 02:03:07,618 | INFO     | did not find any defunct processes belonging to 3628329
[2025-10-13 04:03:38] 2025-10-13 02:03:07,620 | INFO     | did not find any defunct processes belonging to 3628329
[2025-10-13 04:03:38] 2025-10-13 02:03:07,620 | INFO     | ready for new job
[2025-10-13 04:03:38] 2025-10-13 02:03:07,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:03:38] 2025-10-13 02:03:07,621 | INFO     | ***************************************
[2025-10-13 04:03:38] 2025-10-13 02:03:07,621 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:03:38] 2025-10-13 02:03:07,621 | INFO     | ***************************************
[2025-10-13 04:03:38] 2025-10-13 02:03:07,621 | INFO     | 
[2025-10-13 04:03:38] 2025-10-13 02:03:07,621 | INFO     | architecture information:
[2025-10-13 04:03:38] 2025-10-13 02:03:07,622 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:03:38] 2025-10-13 02:03:07,636 | INFO     | cat /etc/os-release:
[2025-10-13 04:03:38] NAME="CentOS Linux"
[2025-10-13 04:03:38] VERSION="7 (Core)"
[2025-10-13 04:03:38] ID="centos"
[2025-10-13 04:03:38] ID_LIKE="rhel fedora"
[2025-10-13 04:03:38] VERSION_ID="7"
[2025-10-13 04:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:03:38] ANSI_COLOR="0;31"
[2025-10-13 04:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:03:38] HOME_URL="https://www.centos.org/"
[2025-10-13 04:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:03:38] 
[2025-10-13 04:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:03:38] 
[2025-10-13 04:03:38] 2025-10-13 02:03:07,637 | INFO     | ***************************************
[2025-10-13 04:03:38] 2025-10-13 02:03:08,140 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | INFO     | sufficient remaining disk space (230332301312 B)
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | INFO     | update_server=False
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:03:38] 2025-10-13 02:03:08,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:03:38] 2025-10-13 02:03:08,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:03:38] 2025-10-13 02:03:08,382 | INFO     | aborting loop
[2025-10-13 04:03:38] 2025-10-13 02:03:08,522 | INFO     | all job control threads have been joined
[2025-10-13 04:03:38] 2025-10-13 02:03:08,951 | INFO     | all data control threads have been joined
[2025-10-13 04:03:38] 2025-10-13 02:03:09,165 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,165 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,239 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,252 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,373 | INFO     | all payload control threads have been joined
[2025-10-13 04:03:38] 2025-10-13 02:03:09,388 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,527 | INFO     | [job] control thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,827 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,955 | INFO     | [job] validate thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:09,957 | INFO     | [data] control thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:10,082 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:10,166 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:10,174 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:10,379 | INFO     | [payload] control thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:10,395 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:10,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:03:38] 2025-10-13 02:03:14,656 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:18,831 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:03:38] 2025-10-13 02:03:19,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:03:38] 2025-10-13 02:03:22,386 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:03:38] 2025-10-13 02:03:23,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096468567872)>', '<ExcThread(monitor, started 140095290062592)>']
[2025-10-13 04:03:38] 2025-10-13 02:03:28,099 | INFO     | all workflow threads have been joined
[2025-10-13 04:03:38] 2025-10-13 02:03:28,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:03:38] 2025-10-13 02:03:28,099 | INFO     | traces error code: 0
[2025-10-13 04:03:38] 2025-10-13 02:03:28,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:03:38] 2025-10-13 02:03:38,030 | INFO     | PID=3621753 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:03:38] 2025-10-13 02:03:38,030 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:03:38] 2025-10-13 02:03:38,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:03:38] 2025-10-13 02:03:38,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:03:38] 2025-10-13 02:03:38,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:03:38] 2025-10-13 02:03:38,030 | INFO     | [monitor] control thread has ended
[2025-10-13 04:03:38] 2025-10-13 02:03:38,109 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:03:38] 2025-10-13 02:03:38,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:03:38] 2025-10-13 02:03:38,117 [wrapper] pilotpid: 3621753
[2025-10-13 04:03:38] 2025-10-13 02:03:38,121 [wrapper] Pilot exit status: 0
[2025-10-13 04:03:38] 2025-10-13 02:03:38,133 [wrapper] pandaids: 6840182199
[2025-10-13 04:03:38] 2025-10-13 02:03:38,156 [wrapper] cleanup supervisor_pilot 3638281 3621754
[2025-10-13 04:03:38] 2025-10-13 02:03:38,160 [wrapper] Test setup, not cleaning
[2025-10-13 04:03:38] 2025-10-13 02:03:38,164 [wrapper] apfmon messages muted
[2025-10-13 04:03:38] 2025-10-13 02:03:38,168 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:03:38] 2025-10-13 02:03:38,172 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:03:38]  *** Error codes and diagnostics ***
[2025-10-13 04:03:38]     "exeErrorCode": 0,
[2025-10-13 04:03:38]     "exeErrorDiag": "",
[2025-10-13 04:03:38]     "pilotErrorCode": 0,
[2025-10-13 04:03:38]     "pilotErrorDiag": "",
[2025-10-13 04:03:38]  *** Listing of results directory ***
[2025-10-13 04:03:38] total 405440
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:37 queuedata.json
[2025-10-13 04:03:38] -rwx------ 1 boinc boinc     36292 Oct 12 16:39 runpilot2-wrapper.sh
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:03:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:51 run_atlas
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:51 job.xml
[2025-10-13 04:03:38] -rw-r--r-- 2 boinc boinc 219371237 Oct 13 02:51 EVNT.46676267._004353.pool.root.1
[2025-10-13 04:03:38] -rw-r--r-- 2 boinc boinc    569681 Oct 13 02:51 input.tar.gz
[2025-10-13 04:03:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:51 start_atlas.sh
[2025-10-13 04:03:38] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:51 shared
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:51 boinc_setup_complete
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc      6377 Oct 13 02:51 init_data.xml
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:51 boinc_lockfile
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:51 pandaJob.out
[2025-10-13 04:03:38] -rw------- 1 boinc boinc    975603 Oct 13 02:51 agis_schedconf.cvmfs.json
[2025-10-13 04:03:38] -rw------- 1 boinc boinc   1560580 Oct 13 02:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:03:38] drwx------ 5 boinc boinc      4096 Oct 13 02:51 pilot3
[2025-10-13 04:03:38] -rw------- 1 boinc boinc 190105313 Oct 13 04:02 HITS.46676269._081049.pool.root.1
[2025-10-13 04:03:38] -rw------- 1 boinc boinc        95 Oct 13 04:02 pilot_heartbeat.json
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:02 boinc_task_state.xml
[2025-10-13 04:03:38] -rw------- 1 boinc boinc      1024 Oct 13 04:02 memory_monitor_summary.json
[2025-10-13 04:03:38] -rw------- 1 boinc boinc    260937 Oct 13 04:02 log.46676269._081049.job.log.tgz.1
[2025-10-13 04:03:38] -rw------- 1 boinc boinc      7766 Oct 13 04:03 heartbeat.json
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:03 boinc_mmap_file
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:03 wrapper_checkpoint.txt
[2025-10-13 04:03:38] -rw------- 1 boinc boinc       747 Oct 13 04:03 pilotlog.txt
[2025-10-13 04:03:38] -rw------- 1 boinc boinc    639271 Oct 13 04:03 log.46676269._081049.job.log.1
[2025-10-13 04:03:38] -rw------- 1 boinc boinc       357 Oct 13 04:03 output.list
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:03 runtime_log
[2025-10-13 04:03:38] -rw------- 1 boinc boinc    921600 Oct 13 04:03 result.tar.gz
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc      8777 Oct 13 04:03 runtime_log.err
[2025-10-13 04:03:38] -rw------- 1 boinc boinc       658 Oct 13 04:03 aKlMDmePCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoHkNDmswG9Xn.diag
[2025-10-13 04:03:38] -rw-r--r-- 1 boinc boinc     10063 Oct 13 04:03 stderr.txt
[2025-10-13 04:03:38] HITS file was successfully produced:
[2025-10-13 04:03:38] -rw------- 1 boinc boinc 190105313 Oct 13 04:02 shared/HITS.pool.root.1
[2025-10-13 04:03:38]  *** Contents of shared directory: ***
[2025-10-13 04:03:38] total 401368
[2025-10-13 04:03:38] -rw-r--r-- 2 boinc boinc 219371237 Oct 13 02:51 ATLAS.root_0
[2025-10-13 04:03:38] -rw-r--r-- 2 boinc boinc    569681 Oct 13 02:51 input.tar.gz
[2025-10-13 04:03:38] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:51 start_atlas.sh
[2025-10-13 04:03:38] -rw------- 1 boinc boinc 190105313 Oct 13 04:02 HITS.pool.root.1
[2025-10-13 04:03:38] -rw------- 1 boinc boinc    921600 Oct 13 04:03 result.tar.gz
04:03:40 (3617973): run_atlas exited; CPU time 16133.811676
04:03:40 (3617973): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN