Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:56 (30592): wrapper (7.7.26015): starting
11:55:56 (30592): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:55:56] Arguments: --nthreads 8
[2025-10-12 11:55:56] Threads: 8
[2025-10-12 11:55:56] Checking for CVMFS
[2025-10-12 11:55:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:55:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:55:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:55:56] 2.11.2.0 2866 8706 74428 151625 1 57 14695215 20275200 1 130560 0 5341714 99.989 289451 36450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:55:56] CVMFS is ok
[2025-10-12 11:55:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:55:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:55:56] Further information can be found at the LHC@home message board.
[2025-10-12 11:55:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:55:56] Checking for apptainer binary...
[2025-10-12 11:55:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:55:56] Running /usr/bin/apptainer --version
[2025-10-12 11:55:56] apptainer version 1.3.2-1.el7
[2025-10-12 11:55:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:55:58] c-204-35.aglt2.org
[2025-10-12 11:55:58] apptainer works
[2025-10-12 11:55:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:55:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:55:58] Starting ATLAS job with PandaID=6839821328
[2025-10-12 11:55:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:57:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:57:34] 2025-10-12 17:57:08,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:57:34] 2025-10-12 17:57:08,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:57:34] 2025-10-12 17:57:08,386 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:57:34] 2025-10-12 17:57:08,386 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,387 | INFO     | sum of deviations: -6031724651.999996
[2025-10-12 13:57:34] 2025-10-12 17:57:08,387 | INFO     | mean x: 1760288206.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,387 | INFO     | mean y: 2518734.151260504
[2025-10-12 13:57:34] 2025-10-12 17:57:08,387 | INFO     | -- intersect: 20323124404.289173
[2025-10-12 13:57:34] 2025-10-12 17:57:08,388 | INFO     | intersect: 20323124404.289173
[2025-10-12 13:57:34] 2025-10-12 17:57:08,388 | INFO     | chi2: 2.330847163410099
[2025-10-12 13:57:34] 2025-10-12 17:57:08,388 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:57:34] 2025-10-12 17:57:08,389 | INFO     | sum of deviations: 2157916998.500001
[2025-10-12 13:57:34] 2025-10-12 17:57:08,389 | INFO     | mean x: 1760288053.5
[2025-10-12 13:57:34] 2025-10-12 17:57:08,389 | INFO     | mean y: 2537868.903508772
[2025-10-12 13:57:34] 2025-10-12 17:57:08,389 | INFO     | -- intersect: -8266574974.443005
[2025-10-12 13:57:34] 2025-10-12 17:57:08,389 | INFO     | intersect: -8266574974.443005
[2025-10-12 13:57:34] 2025-10-12 17:57:08,390 | INFO     | chi2: 1.572826462969542
[2025-10-12 13:57:34] 2025-10-12 17:57:08,390 | INFO     | current chi2=1.572826462969542 (change=32.52125288779338 %)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,390 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,390 | INFO     | sum of deviations: 2290856707.9999986
[2025-10-12 13:57:34] 2025-10-12 17:57:08,391 | INFO     | mean x: 1760287901.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,391 | INFO     | mean y: 2538218.9449541285
[2025-10-12 13:57:34] 2025-10-12 17:57:08,391 | INFO     | -- intersect: -10040387870.05699
[2025-10-12 13:57:34] 2025-10-12 17:57:08,391 | INFO     | intersect: -10040387870.05699
[2025-10-12 13:57:34] 2025-10-12 17:57:08,391 | INFO     | chi2: 1.5748090720484471
[2025-10-12 13:57:34] 2025-10-12 17:57:08,391 | INFO     | current chi2=1.5748090720484471 (change=-0.1260538988619122 %)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,392 | INFO     | right removable region: 108
[2025-10-12 13:57:34] 2025-10-12 17:57:08,392 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:57:34] 2025-10-12 17:57:08,392 | INFO     | sum of deviations: -23212021858.5
[2025-10-12 13:57:34] 2025-10-12 17:57:08,392 | INFO     | mean x: 1760288358.5
[2025-10-12 13:57:34] 2025-10-12 17:57:08,393 | INFO     | mean y: 2559398.6578947366
[2025-10-12 13:57:34] 2025-10-12 17:57:08,393 | INFO     | -- intersect: 88950772634.36673
[2025-10-12 13:57:34] 2025-10-12 17:57:08,393 | INFO     | intersect: 88950772634.36673
[2025-10-12 13:57:34] 2025-10-12 17:57:08,393 | INFO     | chi2: 0.9251555770548823
[2025-10-12 13:57:34] 2025-10-12 17:57:08,393 | INFO     | current chi2=0.9251555770548823 (change=60.30818358328772 %)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,394 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,394 | INFO     | sum of deviations: -22286348048.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,394 | INFO     | mean x: 1760288511.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,394 | INFO     | mean y: 2556805.0733944955
[2025-10-12 13:57:34] 2025-10-12 17:57:08,395 | INFO     | -- intersect: 97704094845.21577
[2025-10-12 13:57:34] 2025-10-12 17:57:08,395 | INFO     | intersect: 97704094845.21577
[2025-10-12 13:57:34] 2025-10-12 17:57:08,395 | INFO     | chi2: 0.9066466380887143
[2025-10-12 13:57:34] 2025-10-12 17:57:08,395 | INFO     | current chi2=0.9066466380887143 (change=2.000629885958091 %)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,395 | INFO     | left removable region: 20
[2025-10-12 13:57:34] 2025-10-12 17:57:08,395 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,396 | INFO     | sum of deviations: -7227785324.0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,396 | INFO     | mean x: 1760288480.5
[2025-10-12 13:57:34] 2025-10-12 17:57:08,396 | INFO     | mean y: 2559892.727272727
[2025-10-12 13:57:34] 2025-10-12 17:57:08,396 | INFO     | -- intersect: 60219507366.67638
[2025-10-12 13:57:34] 2025-10-12 17:57:08,396 | INFO     | intersect: 60219507366.67638
[2025-10-12 13:57:34] 2025-10-12 17:57:08,397 | INFO     | chi2: 0.08668664293140699
[2025-10-12 13:57:34] 2025-10-12 17:57:08,397 | INFO     | -- intersect: 60219507366.67638
[2025-10-12 13:57:34] 2025-10-12 17:57:08,397 | INFO     | current memory leak: -34.21 B/s (using 88 data points, chi2=0.09)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,397 | INFO     | could have reported an average CPU frequency of 1962 MHz (7 samples)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,397 | INFO     | ..............................
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . Timing measurements:
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . get job = 0 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . initial setup = 2 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . payload setup = 8 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . stage-in = 0 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . payload execution = 7214 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . stage-out = 0 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,398 | INFO     | . log creation = 0 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,399 | INFO     | ..............................
[2025-10-12 13:57:34] 2025-10-12 17:57:08,409 | INFO     | time since job start (7253s) is within the limit (172800.0s)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,537 | INFO     | 
[2025-10-12 13:57:34] 2025-10-12 17:57:08,538 | INFO     | job summary report
[2025-10-12 13:57:34] 2025-10-12 17:57:08,538 | INFO     | --------------------------------------------------
[2025-10-12 13:57:34] 2025-10-12 17:57:08,538 | INFO     | PanDA job id: 6839821328
[2025-10-12 13:57:34] 2025-10-12 17:57:08,538 | INFO     | task id: 46676269
[2025-10-12 13:57:34] 2025-10-12 17:57:08,538 | INFO     | errors: (none)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:57:34] 2025-10-12 17:57:08,539 | INFO     | pilot state: finished 
[2025-10-12 13:57:34] 2025-10-12 17:57:08,539 | INFO     | transexitcode: 0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,539 | INFO     | exeerrorcode: 0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,539 | INFO     | exeerrordiag: 
[2025-10-12 13:57:34] 2025-10-12 17:57:08,539 | INFO     | exitcode: 0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,539 | INFO     | exitmsg: OK
[2025-10-12 13:57:34] 2025-10-12 17:57:08,540 | INFO     | cpuconsumptiontime: 53764 s
[2025-10-12 13:57:34] 2025-10-12 17:57:08,540 | INFO     | nevents: 400
[2025-10-12 13:57:34] 2025-10-12 17:57:08,540 | INFO     | neventsw: 0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,540 | INFO     | pid: 8484
[2025-10-12 13:57:34] 2025-10-12 17:57:08,540 | INFO     | pgrp: 8484
[2025-10-12 13:57:34] 2025-10-12 17:57:08,541 | INFO     | corecount: 8
[2025-10-12 13:57:34] 2025-10-12 17:57:08,541 | INFO     | event service: False
[2025-10-12 13:57:34] 2025-10-12 17:57:08,541 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 7226: 2376484, 7227: 2385482, 7229: 2385666, 7236: 2385860}
[2025-10-12 13:57:34] 2025-10-12 17:57:08,541 | INFO     | --------------------------------------------------
[2025-10-12 13:57:34] 2025-10-12 17:57:08,541 | INFO     | 
[2025-10-12 13:57:34] 2025-10-12 17:57:08,541 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 13:57:34] 2025-10-12 17:57:08,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:57:34] 2025-10-12 17:57:08,574 | INFO     | job 6839821328 has completed (purged errors)
[2025-10-12 13:57:34] 2025-10-12 17:57:08,574 | INFO     | overall cleanup function is called
[2025-10-12 13:57:34] 2025-10-12 17:57:09,552 | INFO     | PID=1889 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 13:57:34] 2025-10-12 17:57:09,578 | INFO     | --- collectZombieJob: --- 10, [8484]
[2025-10-12 13:57:34] 2025-10-12 17:57:09,579 | INFO     | zombie collector waiting for pid 8484
[2025-10-12 13:57:34] 2025-10-12 17:57:09,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:57:34] 2025-10-12 17:57:09,579 | INFO     | collected zombie processes
[2025-10-12 13:57:34] 2025-10-12 17:57:09,579 | INFO     | will attempt to kill all subprocesses of pid=8484
[2025-10-12 13:57:34] 2025-10-12 17:57:09,670 | INFO     | process IDs to be killed: [8484] (in reverse order)
[2025-10-12 13:57:34] 2025-10-12 17:57:09,729 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:57:34] 2025-10-12 17:57:09,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:57:34] 2025-10-12 17:57:09,733 | INFO     | did not find any defunct processes belonging to 8484
[2025-10-12 13:57:34] 2025-10-12 17:57:09,736 | INFO     | did not find any defunct processes belonging to 8484
[2025-10-12 13:57:34] 2025-10-12 17:57:09,736 | INFO     | ready for new job
[2025-10-12 13:57:34] 2025-10-12 17:57:09,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:57:34] 2025-10-12 17:57:09,738 | INFO     | ***************************************
[2025-10-12 13:57:34] 2025-10-12 17:57:09,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:57:34] 2025-10-12 17:57:09,738 | INFO     | ***************************************
[2025-10-12 13:57:34] 2025-10-12 17:57:09,738 | INFO     | 
[2025-10-12 13:57:34] 2025-10-12 17:57:09,739 | INFO     | architecture information:
[2025-10-12 13:57:34] 2025-10-12 17:57:09,739 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:57:34] 2025-10-12 17:57:09,757 | INFO     | cat /etc/os-release:
[2025-10-12 13:57:34] NAME="CentOS Linux"
[2025-10-12 13:57:34] VERSION="7 (Core)"
[2025-10-12 13:57:34] ID="centos"
[2025-10-12 13:57:34] ID_LIKE="rhel fedora"
[2025-10-12 13:57:34] VERSION_ID="7"
[2025-10-12 13:57:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:57:34] ANSI_COLOR="0;31"
[2025-10-12 13:57:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:57:34] HOME_URL="https://www.centos.org/"
[2025-10-12 13:57:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:57:34] 
[2025-10-12 13:57:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:57:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:57:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:57:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:57:34] 
[2025-10-12 13:57:34] 2025-10-12 17:57:09,758 | INFO     | ***************************************
[2025-10-12 13:57:34] 2025-10-12 17:57:10,259 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 13:57:34] 2025-10-12 17:57:10,279 | INFO     | sufficient remaining disk space (18550358016 B)
[2025-10-12 13:57:34] 2025-10-12 17:57:10,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:57:34] 2025-10-12 17:57:10,280 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:57:34] 2025-10-12 17:57:10,280 | INFO     | update_server=False
[2025-10-12 13:57:34] 2025-10-12 17:57:10,280 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:57:34] 2025-10-12 17:57:10,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:57:34] 2025-10-12 17:57:10,281 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 13:57:34] 2025-10-12 17:57:10,282 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:57:34] 2025-10-12 17:57:10,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:57:34] 2025-10-12 17:57:10,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:57:34] 2025-10-12 17:57:10,398 | INFO     | all data control threads have been joined
[2025-10-12 13:57:34] 2025-10-12 17:57:10,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:57:34] 2025-10-12 17:57:10,685 | INFO     | aborting loop
[2025-10-12 13:57:34] 2025-10-12 17:57:10,806 | INFO     | all payload control threads have been joined
[2025-10-12 13:57:34] 2025-10-12 17:57:10,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:57:34] 2025-10-12 17:57:10,936 | INFO     | all job control threads have been joined
[2025-10-12 13:57:34] 2025-10-12 17:57:11,284 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,287 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,351 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,404 | INFO     | [data] control thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,687 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,689 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,691 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,768 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,812 | INFO     | [payload] control thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:11,941 | INFO     | [job] control thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:12,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:57:34] 2025-10-12 17:57:12,517 | INFO     | [job] validate thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:12,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:12,670 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:12,691 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:12,902 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:16,457 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:57:34] 2025-10-12 17:57:27,226 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:57:34] 2025-10-12 17:57:28,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741806479168)>', '<ExcThread(monitor, started 139740921722624)>']
[2025-10-12 13:57:34] 2025-10-12 17:57:29,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:57:34] 2025-10-12 17:57:29,376 | INFO     | [monitor] control thread has ended
[2025-10-12 13:57:34] 2025-10-12 17:57:33,932 | INFO     | all workflow threads have been joined
[2025-10-12 13:57:34] 2025-10-12 17:57:33,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:57:34] 2025-10-12 17:57:33,935 | INFO     | traces error code: 0
[2025-10-12 13:57:34] 2025-10-12 17:57:33,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:57:34] 2025-10-12 17:57:34,061 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:57:34] 2025-10-12 17:57:34,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:57:34] 2025-10-12 17:57:34,070 [wrapper] pilotpid: 1889
[2025-10-12 13:57:34] 2025-10-12 17:57:34,074 [wrapper] Pilot exit status: 0
[2025-10-12 13:57:34] 2025-10-12 17:57:34,094 [wrapper] pandaids: 6839821328
[2025-10-12 13:57:34] 2025-10-12 17:57:34,138 [wrapper] cleanup supervisor_pilot 18936 1890
[2025-10-12 13:57:34] 2025-10-12 17:57:34,143 [wrapper] Test setup, not cleaning
[2025-10-12 13:57:34] 2025-10-12 17:57:34,147 [wrapper] apfmon messages muted
[2025-10-12 13:57:34] 2025-10-12 17:57:34,152 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:57:34] 2025-10-12 17:57:34,157 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:57:34]  *** Error codes and diagnostics ***
[2025-10-12 13:57:34]     "exeErrorCode": 0,
[2025-10-12 13:57:34]     "exeErrorDiag": "",
[2025-10-12 13:57:34]     "pilotErrorCode": 0,
[2025-10-12 13:57:34]     "pilotErrorDiag": "",
[2025-10-12 13:57:34]  *** Listing of results directory ***
[2025-10-12 13:57:34] total 413984
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:06 queuedata.json
[2025-10-12 13:57:34] -rwx------ 1 boincer umatlas     36292 Oct 12 05:07 runpilot2-wrapper.sh
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:57:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:55 run_atlas
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:55 job.xml
[2025-10-12 13:57:34] -rw-r--r-- 2 boincer umatlas 224124194 Oct 12 11:55 EVNT.46676267._003561.pool.root.1
[2025-10-12 13:57:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:55 start_atlas.sh
[2025-10-12 13:57:34] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:55 shared
[2025-10-12 13:57:34] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:55 input.tar.gz
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:55 boinc_lockfile
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:55 pandaJob.out
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas    975528 Oct 12 11:56 agis_schedconf.cvmfs.json
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas   1560580 Oct 12 11:56 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:57:34] drwx------ 5 boincer umatlas      4096 Oct 12 11:56 pilot3
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 13:56 init_data.xml
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas 193145503 Oct 12 13:56 HITS.46676269._075016.pool.root.1
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas       529 Oct 12 13:56 boinc_task_state.xml
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas      1050 Oct 12 13:56 memory_monitor_summary.json
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas        95 Oct 12 13:56 pilot_heartbeat.json
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas    356450 Oct 12 13:57 log.46676269._075016.job.log.tgz.1
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas        27 Oct 12 13:57 wrapper_checkpoint.txt
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 13:57 boinc_mmap_file
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas      7852 Oct 12 13:57 heartbeat.json
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas      4552 Oct 12 13:57 pilotlog.txt
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas   1020302 Oct 12 13:57 log.46676269._075016.job.log.1
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas       357 Oct 12 13:57 output.list
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas       620 Oct 12 13:57 runtime_log
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas   1392640 Oct 12 13:57 result.tar.gz
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas       659 Oct 12 13:57 zakKDmPE7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJIjNDmRyUWgm.diag
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 13:57 runtime_log.err
[2025-10-12 13:57:34] -rw-r--r-- 1 boincer umatlas     20904 Oct 12 13:57 stderr.txt
[2025-10-12 13:57:34] HITS file was successfully produced:
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas 193145503 Oct 12 13:56 shared/HITS.pool.root.1
[2025-10-12 13:57:34]  *** Contents of shared directory: ***
[2025-10-12 13:57:34] total 409428
[2025-10-12 13:57:34] -rw-r--r-- 2 boincer umatlas 224124194 Oct 12 11:55 ATLAS.root_0
[2025-10-12 13:57:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:55 start_atlas.sh
[2025-10-12 13:57:34] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:55 input.tar.gz
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas 193145503 Oct 12 13:56 HITS.pool.root.1
[2025-10-12 13:57:34] -rw------- 1 boincer umatlas   1392640 Oct 12 13:57 result.tar.gz
13:57:36 (30592): run_atlas exited; CPU time 53783.583322
13:57:36 (30592): called boinc_finish(0)

</stderr_txt>
]]>

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