Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:56:30 (775984): wrapper (7.7.26015): starting
23:56:30 (775984): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:56:30] Arguments: --nthreads 12
[2025-10-12 23:56:30] Threads: 12
[2025-10-12 23:56:30] Checking for CVMFS
[2025-10-12 23:56:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:56:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:56:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:56:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:56:30] 2.13.2.0 572020 490 60728 151638 3 57 2654174 4097024 0 130560 0 577273 99.990 23868 5692 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 23:56:30] CVMFS is ok
[2025-10-12 23:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:56:30] Further information can be found at the LHC@home message board.
[2025-10-12 23:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:56:30] Checking for apptainer binary...
[2025-10-12 23:56:30] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 23:56:30] apptainer is not installed, using version from CVMFS
[2025-10-12 23:56:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:56:30] pckelar8.cern.ch
[2025-10-12 23:56:30] apptainer works
[2025-10-12 23:56:30] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:56:30] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:56:30] Starting ATLAS job with PandaID=6840182140
[2025-10-12 23:56:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:06:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:06:51]  status_code=0
[2025-10-13 01:06:51]  storage_token=
[2025-10-13 01:06:51]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6840182140/log.46676269._080990.job.log.tgz.1
[2025-10-13 01:06:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/40/log.46676269._080990.job.log.tgz.1
[2025-10-13 01:06:51]  workdir=None
[2025-10-13 01:06:51] ]
[2025-10-13 01:06:51] 2025-10-12 23:05:58,240 | INFO     | transferring file log.46676269._080990.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6840182140/log.46676269._080990.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 01:06:51] 2025-10-12 23:05:58,240 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6840182140/log.46676269._080990.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._080990.job
[2025-10-13 01:06:51] 2025-10-12 23:05:58,258 | INFO     | adding to output.list: log.46676269._080990.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/40/log.46676269._080990.job.log.tg
[2025-10-13 01:06:51] 2025-10-12 23:05:58,258 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:06:51] 2025-10-12 23:05:58,258 | INFO     | summary of transferred files:
[2025-10-13 01:06:51] 2025-10-12 23:05:58,259 | INFO     |  -- lfn=log.46676269._080990.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:06:51] 2025-10-12 23:05:58,259 | INFO     | stage-out finished correctly
[2025-10-13 01:06:51] 2025-10-12 23:05:59,060 | INFO     | time since job start (4161s) is within the limit (172800.0s)
[2025-10-13 01:06:51] 2025-10-12 23:05:59,580 | WARNING  | process 787043 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 01:06:51] 2025-10-12 23:05:59,580 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840182140/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:06:51] 2025-10-12 23:05:59,647 | INFO     | number of running child processes to parent process 787043: 1
[2025-10-13 01:06:51] 2025-10-12 23:05:59,647 | INFO     | maximum number of monitored processes: 6
[2025-10-13 01:06:51] 2025-10-12 23:06:00,607 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:06:51] 2025-10-12 23:06:01,065 | INFO     | time since job start (4163s) is within the limit (172800.0s)
[2025-10-13 01:06:51] 2025-10-12 23:06:01,801 | INFO     | job 6840182140 has state=finished
[2025-10-13 01:06:51] 2025-10-12 23:06:01,801 | INFO     | preparing for final server update for job 6840182140 in state='finished'
[2025-10-13 01:06:51] 2025-10-12 23:06:01,801 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:06:51] 2025-10-12 23:06:01,802 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:06:51] 2025-10-12 23:06:01,802 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:06:51] 2025-10-12 23:06:01,802 | INFO     | job 6840182140 has finished - writing final server update
[2025-10-13 01:06:51] 2025-10-12 23:06:01,802 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:06:51] 2025-10-12 23:06:01,803 | INFO     | executing command: lscpu
[2025-10-13 01:06:51] 2025-10-12 23:06:01,824 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:06:51] 2025-10-12 23:06:02,155 | INFO     | monitor loop #318: job 0:6840182140 is in state 'finished'
[2025-10-13 01:06:51] 2025-10-12 23:06:02,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:06:51] 2025-10-12 23:06:03,071 | INFO     | time since job start (4165s) is within the limit (172800.0s)
[2025-10-13 01:06:51] 2025-10-12 23:06:04,173 | INFO     | PID=779737 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:06:51] 2025-10-12 23:06:04,658 | INFO     | monitor loop #319: job 0:6840182140 is in state 'finished'
[2025-10-13 01:06:51] 2025-10-12 23:06:04,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:06:51] 2025-10-12 23:06:05,173 | INFO     | time since job start (4167s) is within the limit (172800.0s)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,361 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 01:06:51] 2025-10-12 23:06:06,363 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2385.1491666666666
[2025-10-13 01:06:51] 2025-10-12 23:06:06,365 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840182140/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,366 | INFO     | extracted standard info from prmon json
[2025-10-13 01:06:51] 2025-10-12 23:06:06,366 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:06:51] 2025-10-12 23:06:06,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:06:51] 2025-10-12 23:06:06,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:06:51] 2025-10-12 23:06:06,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:06:51] 2025-10-12 23:06:06,367 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:06:51] 2025-10-12 23:06:06,368 | INFO     | sum of square deviations: 70364110.0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,368 | INFO     | sum of deviations: -136609926.9999999
[2025-10-13 01:06:51] 2025-10-12 23:06:06,368 | INFO     | mean x: 1760308357.0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,368 | INFO     | mean y: 2755196.655737705
[2025-10-13 01:06:51] 2025-10-12 23:06:06,368 | INFO     | -- intersect: 3420344023.505957
[2025-10-13 01:06:51] 2025-10-12 23:06:06,368 | INFO     | intersect: 3420344023.505957
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | chi2: 0.0368050595783762
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | -- intersect: 3420344023.505957
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | current memory leak: -1.94 B/s (using 61 data points, chi2=0.04)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | could have reported an average CPU frequency of 2505 MHz (6 samples)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | ..............................
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | . Timing measurements:
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | . get job = 0 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,369 | INFO     | . initial setup = 1 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,370 | INFO     | . payload setup = 6 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,370 | INFO     | . stage-in = 0 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,370 | INFO     | . payload execution = 4135 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,370 | INFO     | . stage-out = 0 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,370 | INFO     | . log creation = 0 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,370 | INFO     | ..............................
[2025-10-13 01:06:51] 2025-10-12 23:06:06,698 | INFO     | 
[2025-10-13 01:06:51] 2025-10-12 23:06:06,699 | INFO     | job summary report
[2025-10-13 01:06:51] 2025-10-12 23:06:06,700 | INFO     | --------------------------------------------------
[2025-10-13 01:06:51] 2025-10-12 23:06:06,700 | INFO     | PanDA job id: 6840182140
[2025-10-13 01:06:51] 2025-10-12 23:06:06,700 | INFO     | task id: 46676269
[2025-10-13 01:06:51] 2025-10-12 23:06:06,700 | INFO     | errors: (none)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | pilot state: finished 
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | transexitcode: 0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | exeerrorcode: 0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | exeerrordiag: 
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | exitcode: 0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | exitmsg: OK
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | cpuconsumptiontime: 45515 s
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | nevents: 400
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | neventsw: 0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | pid: 787043
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | pgrp: 787043
[2025-10-13 01:06:51] 2025-10-12 23:06:06,701 | INFO     | corecount: 12
[2025-10-13 01:06:51] 2025-10-12 23:06:06,702 | INFO     | event service: False
[2025-10-13 01:06:51] 2025-10-12 23:06:06,702 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 4145: 2375149, 4146: 2384147, 4148: 2384203, 4154: 2384525}
[2025-10-13 01:06:51] 2025-10-12 23:06:06,702 | INFO     | --------------------------------------------------
[2025-10-13 01:06:51] 2025-10-12 23:06:06,702 | INFO     | 
[2025-10-13 01:06:51] 2025-10-12 23:06:06,702 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:06:51] 2025-10-12 23:06:06,724 | INFO     | job 6840182140 has completed (purged errors)
[2025-10-13 01:06:51] 2025-10-12 23:06:06,724 | INFO     | overall cleanup function is called
[2025-10-13 01:06:51] 2025-10-12 23:06:07,731 | INFO     | --- collectZombieJob: --- 10, [787043]
[2025-10-13 01:06:51] 2025-10-12 23:06:07,731 | INFO     | zombie collector waiting for pid 787043
[2025-10-13 01:06:51] 2025-10-12 23:06:07,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:06:51] 2025-10-12 23:06:07,731 | INFO     | collected zombie processes
[2025-10-13 01:06:51] 2025-10-12 23:06:07,731 | INFO     | will attempt to kill all subprocesses of pid=787043
[2025-10-13 01:06:51] 2025-10-12 23:06:07,803 | INFO     | process IDs to be killed: [787043] (in reverse order)
[2025-10-13 01:06:51] 2025-10-12 23:06:07,836 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:06:51] 2025-10-12 23:06:07,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:06:51] 2025-10-12 23:06:07,839 | INFO     | did not find any defunct processes belonging to 787043
[2025-10-13 01:06:51] 2025-10-12 23:06:07,840 | INFO     | did not find any defunct processes belonging to 787043
[2025-10-13 01:06:51] 2025-10-12 23:06:07,841 | INFO     | ready for new job
[2025-10-13 01:06:51] 2025-10-12 23:06:07,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:06:51] 2025-10-12 23:06:07,842 | INFO     | ***************************************
[2025-10-13 01:06:51] 2025-10-12 23:06:07,842 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:06:51] 2025-10-12 23:06:07,842 | INFO     | ***************************************
[2025-10-13 01:06:51] 2025-10-12 23:06:07,842 | INFO     | 
[2025-10-13 01:06:51] 2025-10-12 23:06:07,843 | INFO     | architecture information:
[2025-10-13 01:06:51] 2025-10-12 23:06:07,843 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:06:51] 2025-10-12 23:06:07,854 | INFO     | cat /etc/os-release:
[2025-10-13 01:06:51] NAME="CentOS Linux"
[2025-10-13 01:06:51] VERSION="7 (Core)"
[2025-10-13 01:06:51] ID="centos"
[2025-10-13 01:06:51] ID_LIKE="rhel fedora"
[2025-10-13 01:06:51] VERSION_ID="7"
[2025-10-13 01:06:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:06:51] ANSI_COLOR="0;31"
[2025-10-13 01:06:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:06:51] HOME_URL="https://www.centos.org/"
[2025-10-13 01:06:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:06:51] 
[2025-10-13 01:06:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:06:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:06:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:06:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:06:51] 
[2025-10-13 01:06:51] 2025-10-12 23:06:07,854 | INFO     | ***************************************
[2025-10-13 01:06:51] 2025-10-12 23:06:08,357 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 01:06:51] 2025-10-12 23:06:08,371 | INFO     | sufficient remaining disk space (1716781056000 B)
[2025-10-13 01:06:51] 2025-10-12 23:06:08,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:06:51] 2025-10-12 23:06:08,371 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:06:51] 2025-10-12 23:06:08,371 | INFO     | update_server=False
[2025-10-13 01:06:51] 2025-10-12 23:06:08,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:06:51] 2025-10-12 23:06:08,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:06:51] 2025-10-12 23:06:08,372 | INFO     | aborting loop
[2025-10-13 01:06:51] 2025-10-12 23:06:08,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:06:51] 2025-10-12 23:06:08,753 | INFO     | all payload control threads have been joined
[2025-10-13 01:06:51] 2025-10-12 23:06:08,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:06:51] 2025-10-12 23:06:09,045 | INFO     | all data control threads have been joined
[2025-10-13 01:06:51] 2025-10-12 23:06:09,377 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,377 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,378 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,420 | INFO     | all job control threads have been joined
[2025-10-13 01:06:51] 2025-10-12 23:06:09,506 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,693 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,758 | INFO     | [payload] control thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,900 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:09,972 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:10,049 | INFO     | [data] control thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:10,426 | INFO     | [job] control thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:10,609 | INFO     | [job] validate thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:10,768 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:10,821 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:10,842 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:11,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:06:51] 2025-10-12 23:06:15,183 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:18,797 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:06:51] 2025-10-12 23:06:19,802 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:06:51] 2025-10-12 23:06:38,277 | INFO     | PID=779737 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:06:51] 2025-10-12 23:06:38,277 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:06:51] 2025-10-12 23:06:38,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:06:51] 2025-10-12 23:06:38,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:06:51] 2025-10-12 23:06:44,358 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:06:51] 2025-10-12 23:06:46,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953578288960)>', '<ExcThread(monitor, started 139952885053184)>']
[2025-10-13 01:06:51] 2025-10-12 23:06:47,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:06:51] 2025-10-12 23:06:47,295 | INFO     | [monitor] control thread has ended
[2025-10-13 01:06:51] 2025-10-12 23:06:51,361 | INFO     | all workflow threads have been joined
[2025-10-13 01:06:51] 2025-10-12 23:06:51,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:06:51] 2025-10-12 23:06:51,361 | INFO     | traces error code: 0
[2025-10-13 01:06:51] 2025-10-12 23:06:51,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:06:51] 2025-10-12 23:06:51,438 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:06:51] 2025-10-12 23:06:51,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:06:51] 2025-10-12 23:06:51,443 [wrapper] pilotpid: 779737
[2025-10-13 01:06:51] 2025-10-12 23:06:51,445 [wrapper] Pilot exit status: 0
[2025-10-13 01:06:51] 2025-10-12 23:06:51,453 [wrapper] pandaids: 6840182140
[2025-10-13 01:06:51] 2025-10-12 23:06:51,474 [wrapper] cleanup supervisor_pilot  800269 779738
[2025-10-13 01:06:51] 2025-10-12 23:06:51,476 [wrapper] Test setup, not cleaning
[2025-10-13 01:06:51] 2025-10-12 23:06:51,478 [wrapper] apfmon messages muted
[2025-10-13 01:06:51] 2025-10-12 23:06:51,480 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:06:51] 2025-10-12 23:06:51,482 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:06:51]  *** Error codes and diagnostics ***
[2025-10-13 01:06:51]     "exeErrorCode": 0,
[2025-10-13 01:06:51]     "exeErrorDiag": "",
[2025-10-13 01:06:51]     "pilotErrorCode": 0,
[2025-10-13 01:06:51]     "pilotErrorDiag": "",
[2025-10-13 01:06:51]  *** Listing of results directory ***
[2025-10-13 01:06:51] total 413748
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 01:06:51] -rwx------ 1 boinc boinc     36292 Oct 12 16:37 runpilot2-wrapper.sh
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:37 queuedata.json
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:06:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:56 run_atlas
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:56 job.xml
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc      6251 Oct 12 23:56 init_data.xml
[2025-10-13 01:06:51] -rw-r--r-- 2 boinc boinc 219699077 Oct 12 23:56 EVNT.46676267._004351.pool.root.1
[2025-10-13 01:06:51] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:56 start_atlas.sh
[2025-10-13 01:06:51] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:56 shared
[2025-10-13 01:06:51] -rw-r--r-- 2 boinc boinc    569681 Oct 12 23:56 input.tar.gz
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:56 boinc_lockfile
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:56 pandaJob.out
[2025-10-13 01:06:51] -rw------- 1 boinc boinc    975528 Oct 12 23:56 agis_schedconf.cvmfs.json
[2025-10-13 01:06:51] -rw------- 1 boinc boinc   1560580 Oct 12 23:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:06:51] drwx------ 5 boinc boinc      4096 Oct 12 23:56 pilot3
[2025-10-13 01:06:51] -rw------- 1 boinc boinc 198107110 Oct 13 01:05 HITS.46676269._080990.pool.root.1
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:05 boinc_task_state.xml
[2025-10-13 01:06:51] -rw------- 1 boinc boinc      1014 Oct 13 01:05 memory_monitor_summary.json
[2025-10-13 01:06:51] -rw------- 1 boinc boinc    369157 Oct 13 01:05 log.46676269._080990.job.log.tgz.1
[2025-10-13 01:06:51] -rw------- 1 boinc boinc      7782 Oct 13 01:06 heartbeat.json
[2025-10-13 01:06:51] -rw------- 1 boinc boinc        95 Oct 13 01:06 pilot_heartbeat.json
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:06 boinc_mmap_file
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:06 wrapper_checkpoint.txt
[2025-10-13 01:06:51] -rw------- 1 boinc boinc      4821 Oct 13 01:06 pilotlog.txt
[2025-10-13 01:06:51] -rw------- 1 boinc boinc    617343 Oct 13 01:06 log.46676269._080990.job.log.1
[2025-10-13 01:06:51] -rw------- 1 boinc boinc       357 Oct 13 01:06 output.list
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:06 runtime_log
[2025-10-13 01:06:51] -rw------- 1 boinc boinc   1003520 Oct 13 01:06 result.tar.gz
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc      8727 Oct 13 01:06 runtime_log.err
[2025-10-13 01:06:51] -rw------- 1 boinc boinc       657 Oct 13 01:06 ERIMDmhNCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5GkNDmd8mbDn.diag
[2025-10-13 01:06:51] -rw-r--r-- 1 boinc boinc     22293 Oct 13 01:06 stderr.txt
[2025-10-13 01:06:51] HITS file was successfully produced:
[2025-10-13 01:06:51] -rw------- 1 boinc boinc 198107110 Oct 13 01:05 shared/HITS.pool.root.1
[2025-10-13 01:06:51]  *** Contents of shared directory: ***
[2025-10-13 01:06:51] total 409576
[2025-10-13 01:06:51] -rw-r--r-- 2 boinc boinc 219699077 Oct 12 23:56 ATLAS.root_0
[2025-10-13 01:06:51] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:56 start_atlas.sh
[2025-10-13 01:06:51] -rw-r--r-- 2 boinc boinc    569681 Oct 12 23:56 input.tar.gz
[2025-10-13 01:06:51] -rw------- 1 boinc boinc 198107110 Oct 13 01:05 HITS.pool.root.1
[2025-10-13 01:06:51] -rw------- 1 boinc boinc   1003520 Oct 13 01:06 result.tar.gz
01:06:52 (775984): run_atlas exited; CPU time 45525.251701
01:06:52 (775984): called boinc_finish(0)

</stderr_txt>
]]>

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