Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:13 (25836): wrapper (7.7.26015): starting
11:55:13 (25836): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:55:13] Arguments: --nthreads 8
[2025-10-12 11:55:13] Threads: 8
[2025-10-12 11:55:13] Checking for CVMFS
[2025-10-12 11:55:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:55:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:55:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:55:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:55:13] 2.11.2.0 17210 53073 127548 151625 2 57 16792953 18432001 1833 130560 0 48187320 99.975 2395610 35128 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:55:13] CVMFS is ok
[2025-10-12 11:55:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:55:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:55:13] Further information can be found at the LHC@home message board.
[2025-10-12 11:55:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:55:13] Checking for apptainer binary...
[2025-10-12 11:55:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:55:13] Running /usr/bin/apptainer --version
[2025-10-12 11:55:13] apptainer version 1.3.2-1.el7
[2025-10-12 11:55:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:55:14] c-206-14.aglt2.org
[2025-10-12 11:55:14] apptainer works
[2025-10-12 11:55:14] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:55:14] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:55:14] Starting ATLAS job with PandaID=6840182084
[2025-10-12 11:55:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:01:48]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:01:48] 2025-10-12 19:01:08,981 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:01:48] 2025-10-12 19:01:08,983 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:01:48] 2025-10-12 19:01:08,984 | INFO     | sum of square deviations: 1900284932.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,985 | INFO     | sum of deviations: -11575607050.00001
[2025-10-12 15:01:48] 2025-10-12 19:01:08,985 | INFO     | mean x: 1760290101.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,985 | INFO     | mean y: 2490165.098360656
[2025-10-12 15:01:48] 2025-10-12 19:01:08,985 | INFO     | -- intersect: 10725317126.492605
[2025-10-12 15:01:48] 2025-10-12 19:01:08,985 | INFO     | intersect: 10725317126.492605
[2025-10-12 15:01:48] 2025-10-12 19:01:08,985 | INFO     | chi2: 2.261894258946567
[2025-10-12 15:01:48] 2025-10-12 19:01:08,986 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | sum of deviations: 754736774.0000023
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | mean x: 1760289948.5
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | mean y: 2502304.9325842694
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | -- intersect: -757220209.011197
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | intersect: -757220209.011197
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | chi2: 1.4939075790801684
[2025-10-12 15:01:48] 2025-10-12 19:01:08,987 | INFO     | current chi2=1.4939075790801684 (change=33.953252979388765 %)
[2025-10-12 15:01:48] 2025-10-12 19:01:08,988 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,988 | INFO     | sum of deviations: 848882221.9999986
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | mean x: 1760289796.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | mean y: 2502405.3063583816
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | -- intersect: -928239756.4635307
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | intersect: -928239756.4635307
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | chi2: 1.4942627364194006
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | current chi2=1.4942627364194006 (change=-0.023773715603670136 %)
[2025-10-12 15:01:48] 2025-10-12 19:01:08,989 | INFO     | right removable region: 172
[2025-10-12 15:01:48] 2025-10-12 19:01:08,990 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 15:01:48] 2025-10-12 19:01:08,990 | INFO     | sum of deviations: -36904261534.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,991 | INFO     | mean x: 1760290253.5
[2025-10-12 15:01:48] 2025-10-12 19:01:08,991 | INFO     | mean y: 2515313.449438202
[2025-10-12 15:01:48] 2025-10-12 19:01:08,991 | INFO     | -- intersect: 37150570332.87168
[2025-10-12 15:01:48] 2025-10-12 19:01:08,991 | INFO     | intersect: 37150570332.87168
[2025-10-12 15:01:48] 2025-10-12 19:01:08,991 | INFO     | chi2: 0.9398587636268528
[2025-10-12 15:01:48] 2025-10-12 19:01:08,991 | INFO     | current chi2=0.9398587636268528 (change=58.44815645517515 %)
[2025-10-12 15:01:48] 2025-10-12 19:01:08,992 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,992 | INFO     | sum of deviations: -35261078914.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,993 | INFO     | mean x: 1760290406.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,993 | INFO     | mean y: 2513508.3352601156
[2025-10-12 15:01:48] 2025-10-12 19:01:08,993 | INFO     | -- intersect: 38663924169.42467
[2025-10-12 15:01:48] 2025-10-12 19:01:08,993 | INFO     | intersect: 38663924169.42467
[2025-10-12 15:01:48] 2025-10-12 19:01:08,993 | INFO     | chi2: 0.9260052491796638
[2025-10-12 15:01:48] 2025-10-12 19:01:08,994 | INFO     | current chi2=0.9260052491796638 (change=1.4739996032732916 %)
[2025-10-12 15:01:48] 2025-10-12 19:01:08,994 | INFO     | left removable region: 20
[2025-10-12 15:01:48] 2025-10-12 19:01:08,994 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 15:01:48] 2025-10-12 19:01:08,995 | INFO     | sum of deviations: -12294612494.5
[2025-10-12 15:01:48] 2025-10-12 19:01:08,996 | INFO     | mean x: 1760290375.5
[2025-10-12 15:01:48] 2025-10-12 19:01:08,996 | INFO     | mean y: 2515016.9013157897
[2025-10-12 15:01:48] 2025-10-12 19:01:08,996 | INFO     | -- intersect: 19877589710.511738
[2025-10-12 15:01:48] 2025-10-12 19:01:08,996 | INFO     | intersect: 19877589710.511738
[2025-10-12 15:01:48] 2025-10-12 19:01:08,997 | INFO     | chi2: 0.10282114147477353
[2025-10-12 15:01:48] 2025-10-12 19:01:08,997 | INFO     | -- intersect: 19877589710.511738
[2025-10-12 15:01:48] 2025-10-12 19:01:08,997 | INFO     | current memory leak: -11.29 B/s (using 152 data points, chi2=0.10)
[2025-10-12 15:01:48] 2025-10-12 19:01:08,997 | INFO     | could have reported an average CPU frequency of 2559 MHz (10 samples)
[2025-10-12 15:01:48] 2025-10-12 19:01:08,998 | INFO     | ..............................
[2025-10-12 15:01:48] 2025-10-12 19:01:08,998 | INFO     | . Timing measurements:
[2025-10-12 15:01:48] 2025-10-12 19:01:08,998 | INFO     | . get job = 0 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,998 | INFO     | . initial setup = 2 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,998 | INFO     | . payload setup = 4 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,998 | INFO     | . stage-in = 0 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,999 | INFO     | . payload execution = 11113 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,999 | INFO     | . stage-out = 2 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,999 | INFO     | . log creation = 0 s
[2025-10-12 15:01:48] 2025-10-12 19:01:08,999 | INFO     | ..............................
[2025-10-12 15:01:48] 2025-10-12 19:01:09,540 | INFO     | 
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | job summary report
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | --------------------------------------------------
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | PanDA job id: 6840182084
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | task id: 46676269
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | errors: (none)
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | pilot state: finished 
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | transexitcode: 0
[2025-10-12 15:01:48] 2025-10-12 19:01:09,541 | INFO     | exeerrorcode: 0
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | exeerrordiag: 
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | exitcode: 0
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | exitmsg: OK
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | cpuconsumptiontime: 84271 s
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | nevents: 400
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | neventsw: 0
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | pid: 3616
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | pgrp: 3616
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | corecount: 8
[2025-10-12 15:01:48] 2025-10-12 19:01:09,542 | INFO     | event service: False
[2025-10-12 15:01:48] 2025-10-12 19:01:09,543 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 11118: 2378333, 11119: 2378460, 11122: 2387570, 11128: 2387708}
[2025-10-12 15:01:48] 2025-10-12 19:01:09,543 | INFO     | --------------------------------------------------
[2025-10-12 15:01:48] 2025-10-12 19:01:09,543 | INFO     | 
[2025-10-12 15:01:48] 2025-10-12 19:01:09,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 15:01:48] 2025-10-12 19:01:09,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:01:48] 2025-10-12 19:01:09,563 | INFO     | job 6840182084 has completed (purged errors)
[2025-10-12 15:01:48] 2025-10-12 19:01:09,563 | INFO     | overall cleanup function is called
[2025-10-12 15:01:48] 2025-10-12 19:01:10,570 | INFO     | --- collectZombieJob: --- 10, [3616]
[2025-10-12 15:01:48] 2025-10-12 19:01:10,570 | INFO     | zombie collector waiting for pid 3616
[2025-10-12 15:01:48] 2025-10-12 19:01:10,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:01:48] 2025-10-12 19:01:10,570 | INFO     | collected zombie processes
[2025-10-12 15:01:48] 2025-10-12 19:01:10,571 | INFO     | will attempt to kill all subprocesses of pid=3616
[2025-10-12 15:01:48] 2025-10-12 19:01:10,739 | INFO     | process IDs to be killed: [3616] (in reverse order)
[2025-10-12 15:01:48] 2025-10-12 19:01:10,786 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:01:48] 2025-10-12 19:01:10,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:01:48] 2025-10-12 19:01:10,792 | INFO     | did not find any defunct processes belonging to 3616
[2025-10-12 15:01:48] 2025-10-12 19:01:10,797 | INFO     | did not find any defunct processes belonging to 3616
[2025-10-12 15:01:48] 2025-10-12 19:01:10,797 | INFO     | ready for new job
[2025-10-12 15:01:48] 2025-10-12 19:01:10,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:01:48] 2025-10-12 19:01:10,799 | INFO     | ***************************************
[2025-10-12 15:01:48] 2025-10-12 19:01:10,799 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:01:48] 2025-10-12 19:01:10,800 | INFO     | ***************************************
[2025-10-12 15:01:48] 2025-10-12 19:01:10,800 | INFO     | 
[2025-10-12 15:01:48] 2025-10-12 19:01:10,801 | INFO     | architecture information:
[2025-10-12 15:01:48] 2025-10-12 19:01:10,801 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:01:48] 2025-10-12 19:01:10,815 | INFO     | cat /etc/os-release:
[2025-10-12 15:01:48] NAME="CentOS Linux"
[2025-10-12 15:01:48] VERSION="7 (Core)"
[2025-10-12 15:01:48] ID="centos"
[2025-10-12 15:01:48] ID_LIKE="rhel fedora"
[2025-10-12 15:01:48] VERSION_ID="7"
[2025-10-12 15:01:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:01:48] ANSI_COLOR="0;31"
[2025-10-12 15:01:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:01:48] HOME_URL="https://www.centos.org/"
[2025-10-12 15:01:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:01:48] 
[2025-10-12 15:01:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:01:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:01:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:01:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:01:48] 
[2025-10-12 15:01:48] 2025-10-12 19:01:10,816 | INFO     | ***************************************
[2025-10-12 15:01:48] 2025-10-12 19:01:11,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 15:01:48] 2025-10-12 19:01:11,346 | INFO     | sufficient remaining disk space (28208791552 B)
[2025-10-12 15:01:48] 2025-10-12 19:01:11,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:01:48] 2025-10-12 19:01:11,347 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:01:48] 2025-10-12 19:01:11,347 | INFO     | update_server=False
[2025-10-12 15:01:48] 2025-10-12 19:01:11,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:01:48] 2025-10-12 19:01:11,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:01:48] 2025-10-12 19:01:11,473 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 15:01:48] 2025-10-12 19:01:11,473 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 15:01:48] 2025-10-12 19:01:11,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:01:48] 2025-10-12 19:01:11,474 | INFO     | will abort loop
[2025-10-12 15:01:48] 2025-10-12 19:01:11,804 | INFO     | all data control threads have been joined
[2025-10-12 15:01:48] 2025-10-12 19:01:12,190 | INFO     | all payload control threads have been joined
[2025-10-12 15:01:48] 2025-10-12 19:01:12,348 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:12,354 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:12,479 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:12,526 | INFO     | all job control threads have been joined
[2025-10-12 15:01:48] 2025-10-12 19:01:12,585 | INFO     | [job] validate thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:12,625 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:12,809 | INFO     | [data] control thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,196 | INFO     | [payload] control thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,287 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,327 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,354 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:01:48] 2025-10-12 19:01:13,524 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,532 | INFO     | [job] control thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:13,845 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:14,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:01:48] 2025-10-12 19:01:15,176 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:17,431 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:01:48] 2025-10-12 19:01:41,634 | INFO     | PID=29501 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:01:48] 2025-10-12 19:01:41,634 | INFO     | .. there are 3 such processes running
[2025-10-12 15:01:48] 2025-10-12 19:01:41,635 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:01:48] 2025-10-12 19:01:41,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:01:48] 2025-10-12 19:01:41,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:01:48] 2025-10-12 19:01:42,630 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:01:48] 2025-10-12 19:01:43,180 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429056771904)>', '<ExcThread(monitor, started 140428745615104)>']
[2025-10-12 15:01:48] 2025-10-12 19:01:43,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:01:48] 2025-10-12 19:01:43,646 | INFO     | [monitor] control thread has ended
[2025-10-12 15:01:48] 2025-10-12 19:01:48,204 | INFO     | all workflow threads have been joined
[2025-10-12 15:01:48] 2025-10-12 19:01:48,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:01:48] 2025-10-12 19:01:48,205 | INFO     | traces error code: 0
[2025-10-12 15:01:48] 2025-10-12 19:01:48,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:01:48] 2025-10-12 19:01:48,319 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:01:48] 2025-10-12 19:01:48,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:01:48] 2025-10-12 19:01:48,329 [wrapper] pilotpid: 29501
[2025-10-12 15:01:48] 2025-10-12 19:01:48,331 [wrapper] Pilot exit status: 0
[2025-10-12 15:01:48] 2025-10-12 19:01:48,340 [wrapper] pandaids: 6840182084
[2025-10-12 15:01:48] 2025-10-12 19:01:48,388 [wrapper] cleanup supervisor_pilot 32752 29502
[2025-10-12 15:01:48] 2025-10-12 19:01:48,391 [wrapper] Test setup, not cleaning
[2025-10-12 15:01:48] 2025-10-12 19:01:48,393 [wrapper] apfmon messages muted
[2025-10-12 15:01:48] 2025-10-12 19:01:48,395 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:01:48] 2025-10-12 19:01:48,398 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:01:48]  *** Error codes and diagnostics ***
[2025-10-12 15:01:48]     "exeErrorCode": 0,
[2025-10-12 15:01:48]     "exeErrorDiag": "",
[2025-10-12 15:01:48]     "pilotErrorCode": 0,
[2025-10-12 15:01:48]     "pilotErrorDiag": "",
[2025-10-12 15:01:48]  *** Listing of results directory ***
[2025-10-12 15:01:48] total 413412
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 15:01:48] -rwx------ 1 boincer umatlas     36292 Oct 12 10:37 runpilot2-wrapper.sh
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:37 queuedata.json
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:01:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:55 run_atlas
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:55 job.xml
[2025-10-12 15:01:48] -rw-r--r-- 2 boincer umatlas 220288751 Oct 12 11:55 EVNT.46676267._004340.pool.root.1
[2025-10-12 15:01:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:55 start_atlas.sh
[2025-10-12 15:01:48] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:55 shared
[2025-10-12 15:01:48] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 11:55 input.tar.gz
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:55 boinc_lockfile
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 11:55 pandaJob.out
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas    975528 Oct 12 11:55 agis_schedconf.cvmfs.json
[2025-10-12 15:01:48] drwx------ 5 boincer umatlas      4096 Oct 12 11:55 pilot3
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 14:55 init_data.xml
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas 195184056 Oct 12 15:00 HITS.46676269._080944.pool.root.1
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas       530 Oct 12 15:00 boinc_task_state.xml
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas      1054 Oct 12 15:00 memory_monitor_summary.json
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas   1560580 Oct 12 15:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas    415903 Oct 12 15:01 log.46676269._080944.job.log.tgz.1
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas      7860 Oct 12 15:01 heartbeat.json
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:01 boinc_mmap_file
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas        28 Oct 12 15:01 wrapper_checkpoint.txt
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas        95 Oct 12 15:01 pilot_heartbeat.json
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas      5007 Oct 12 15:01 pilotlog.txt
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas   1564110 Oct 12 15:01 log.46676269._080944.job.log.1
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas       357 Oct 12 15:01 output.list
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:01 runtime_log
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas   1996800 Oct 12 15:01 result.tar.gz
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 15:01 runtime_log.err
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas       662 Oct 12 15:01 8wWLDmhNCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVGkNDmsqTrKm.diag
[2025-10-12 15:01:48] -rw-r--r-- 1 boincer umatlas     20908 Oct 12 15:01 stderr.txt
[2025-10-12 15:01:48] HITS file was successfully produced:
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas 195184056 Oct 12 15:00 shared/HITS.pool.root.1
[2025-10-12 15:01:48]  *** Contents of shared directory: ***
[2025-10-12 15:01:48] total 408272
[2025-10-12 15:01:48] -rw-r--r-- 2 boincer umatlas 220288751 Oct 12 11:55 ATLAS.root_0
[2025-10-12 15:01:48] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:55 start_atlas.sh
[2025-10-12 15:01:48] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 11:55 input.tar.gz
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas 195184056 Oct 12 15:00 HITS.pool.root.1
[2025-10-12 15:01:48] -rw------- 1 boincer umatlas   1996800 Oct 12 15:01 result.tar.gz
15:01:50 (25836): run_atlas exited; CPU time 84395.435831
15:01:50 (25836): called boinc_finish(0)

</stderr_txt>
]]>

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