Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:20:48 (3561353): wrapper (7.7.26015): starting
12:20:48 (3561353): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 12:20:48] Arguments: --nthreads 10
[2025-10-12 12:20:48] Threads: 10
[2025-10-12 12:20:48] Checking for CVMFS
[2025-10-12 12:20:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:20:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:20:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:20:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:20:49] 2.13.1.0 7481 77571 111608 151625 2 517 34069652 40960001 29175 16776704 0 447234368 99.779 253544225 45794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:20:49] CVMFS is ok
[2025-10-12 12:20:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:20:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:20:49] Further information can be found at the LHC@home message board.
[2025-10-12 12:20:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:20:49] Checking for apptainer binary...
[2025-10-12 12:20:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:20:49] Running /usr/bin/apptainer --version
[2025-10-12 12:20:50] apptainer version 1.4.3-1.el9
[2025-10-12 12:20:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:20:51] c-208-38.aglt2.org
[2025-10-12 12:20:51] apptainer works
[2025-10-12 12:20:51] Set ATHENA_PROC_NUMBER=10
[2025-10-12 12:20:51] Set ATHENA_CORE_NUMBER=10
[2025-10-12 12:20:51] Starting ATLAS job with PandaID=6839870025
[2025-10-12 12:20:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:00:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:00:56] 2025-10-12 17:42:04,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:04,898 | INFO     | time since job start (4831s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:06,905 | INFO     | time since job start (4833s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:07,086 | INFO     | monitor loop #323: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:07,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:08,912 | INFO     | time since job start (4835s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:09,591 | INFO     | monitor loop #324: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:09,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:10,944 | INFO     | time since job start (4837s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:12,098 | INFO     | monitor loop #325: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:12,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:12,953 | INFO     | time since job start (4839s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:14,603 | INFO     | monitor loop #326: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:14,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:14,969 | INFO     | time since job start (4841s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:16,976 | INFO     | time since job start (4843s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:17,108 | INFO     | monitor loop #327: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:17,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:18,983 | INFO     | time since job start (4845s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:19,613 | INFO     | monitor loop #328: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:19,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:20,990 | INFO     | time since job start (4847s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:22,118 | INFO     | monitor loop #329: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:22,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:22,997 | INFO     | time since job start (4849s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:24,633 | INFO     | monitor loop #330: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:24,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:25,172 | INFO     | PID=3565377 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:00:56] 2025-10-12 17:42:25,173 | INFO     | .. there are 23 such processes running
[2025-10-12 14:00:56] 2025-10-12 17:42:26,173 | INFO     | time since job start (4853s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:27,138 | INFO     | monitor loop #331: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:27,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:28,180 | INFO     | time since job start (4855s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:29,661 | INFO     | monitor loop #332: job 0:6839870025 is in state 'finished'
[2025-10-12 14:00:56] 2025-10-12 17:42:29,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:00:56] 2025-10-12 17:42:30,187 | INFO     | time since job start (4857s) is within the limit (172800.0s)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,428 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:00:56] 2025-10-12 17:42:31,438 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3706.3467890624975
[2025-10-12 14:00:56] 2025-10-12 17:42:31,464 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839870025/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,469 | INFO     | extracted standard info from prmon json
[2025-10-12 14:00:56] 2025-10-12 17:42:31,469 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:00:56] 2025-10-12 17:42:31,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:00:56] 2025-10-12 17:42:31,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:00:56] 2025-10-12 17:42:31,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:00:56] 2025-10-12 17:42:31,470 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:00:56] 2025-10-12 17:42:31,470 | INFO     | sum of square deviations: 110978909.23943666
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | sum of deviations: 2494088948.1690135
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | mean x: 1760288613.1971831
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | mean y: 2562947.8450704226
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | -- intersect: -39557353488.986725
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | intersect: -39557353488.986725
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | chi2: 0.07315024681845034
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | -- intersect: -39557353488.986725
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | current memory leak: 22.47 B/s (using 71 data points, chi2=0.07)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,471 | INFO     | could have reported an average CPU frequency of 3758 MHz (6 samples)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | ..............................
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . Timing measurements:
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . get job = 0 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . initial setup = 4 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . payload setup = 27 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . stage-in = 0 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . payload execution = 4751 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . stage-out = 2 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | . log creation = 0 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,472 | INFO     | ..............................
[2025-10-12 14:00:56] 2025-10-12 17:42:31,594 | INFO     | 
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | job summary report
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | --------------------------------------------------
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | PanDA job id: 6839870025
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | task id: 46676269
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | errors: (none)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | pilot state: finished 
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | transexitcode: 0
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | exeerrorcode: 0
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | exeerrordiag: 
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | exitcode: 0
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | exitmsg: OK
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | cpuconsumptiontime: 25106 s
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | nevents: 400
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | neventsw: 0
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | pid: 3573708
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | pgrp: 3573708
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | corecount: 10
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | event service: False
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | sizes: {0: 2347978, 1: 2348834, 12: 2348834, 20: 2349124, 23: 2349152, 4783: 2375557, 4786: 2384555, 4789: 2384611, 4821: 2384805}
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | --------------------------------------------------
[2025-10-12 14:00:56] 2025-10-12 17:42:31,595 | INFO     | 
[2025-10-12 14:00:56] 2025-10-12 17:42:31,596 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:00:56] 2025-10-12 17:42:31,676 | INFO     | job 6839870025 has completed (purged errors)
[2025-10-12 14:00:56] 2025-10-12 17:42:31,676 | INFO     | overall cleanup function is called
[2025-10-12 14:00:56] 2025-10-12 17:42:32,683 | INFO     | --- collectZombieJob: --- 10, [3573708]
[2025-10-12 14:00:56] 2025-10-12 17:42:32,684 | INFO     | zombie collector waiting for pid 3573708
[2025-10-12 14:00:56] 2025-10-12 17:42:32,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:00:56] 2025-10-12 17:42:32,684 | INFO     | collected zombie processes
[2025-10-12 14:00:56] 2025-10-12 17:42:32,684 | INFO     | will attempt to kill all subprocesses of pid=3573708
[2025-10-12 14:00:56] 2025-10-12 17:42:33,558 | INFO     | process IDs to be killed: [3573708] (in reverse order)
[2025-10-12 14:00:56] 2025-10-12 17:42:33,917 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:00:56] 2025-10-12 17:42:33,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:00:56] 2025-10-12 17:42:33,940 | INFO     | did not find any defunct processes belonging to 3573708
[2025-10-12 14:00:56] 2025-10-12 17:42:33,962 | INFO     | did not find any defunct processes belonging to 3573708
[2025-10-12 14:00:56] 2025-10-12 17:42:33,963 | INFO     | ready for new job
[2025-10-12 14:00:56] 2025-10-12 17:42:33,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:00:56] 2025-10-12 17:42:33,964 | INFO     | ***************************************
[2025-10-12 14:00:56] 2025-10-12 17:42:33,964 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:00:56] 2025-10-12 17:42:33,964 | INFO     | ***************************************
[2025-10-12 14:00:56] 2025-10-12 17:42:33,964 | INFO     | 
[2025-10-12 14:00:56] 2025-10-12 17:42:33,969 | INFO     | architecture information:
[2025-10-12 14:00:56] 2025-10-12 17:42:33,969 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:00:56] 2025-10-12 17:42:33,982 | INFO     | cat /etc/os-release:
[2025-10-12 14:00:56] NAME="CentOS Linux"
[2025-10-12 14:00:56] VERSION="7 (Core)"
[2025-10-12 14:00:56] ID="centos"
[2025-10-12 14:00:56] ID_LIKE="rhel fedora"
[2025-10-12 14:00:56] VERSION_ID="7"
[2025-10-12 14:00:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:00:56] ANSI_COLOR="0;31"
[2025-10-12 14:00:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:00:56] HOME_URL="https://www.centos.org/"
[2025-10-12 14:00:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:00:56] 
[2025-10-12 14:00:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:00:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:00:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:00:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:00:56] 
[2025-10-12 14:00:56] 2025-10-12 17:42:33,983 | INFO     | ***************************************
[2025-10-12 14:00:56] 2025-10-12 17:42:34,492 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:00:56] 2025-10-12 17:42:34,718 | INFO     | sufficient remaining disk space (170448125952 B)
[2025-10-12 14:00:56] 2025-10-12 17:42:34,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:00:56] 2025-10-12 17:42:34,718 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:00:56] 2025-10-12 17:42:34,718 | INFO     | update_server=False
[2025-10-12 14:00:56] 2025-10-12 17:42:34,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:00:56] 2025-10-12 17:42:34,905 | INFO     | all job control threads have been joined
[2025-10-12 14:00:56] 2025-10-12 17:42:35,015 | INFO     | all data control threads have been joined
[2025-10-12 14:00:56] 2025-10-12 17:42:35,123 | INFO     | all payload control threads have been joined
[2025-10-12 14:00:56] 2025-10-12 17:42:35,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:00:56] 2025-10-12 17:42:35,682 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:00:56] 2025-10-12 17:42:35,701 | INFO     | aborting loop
[2025-10-12 14:00:56] 2025-10-12 17:42:35,724 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:35,911 | INFO     | [job] control thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:35,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,021 | INFO     | [data] control thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,058 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,129 | INFO     | [payload] control thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,166 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,475 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,573 | INFO     | [job] validate thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,574 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,608 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:00:56] 2025-10-12 17:42:36,715 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:36,986 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:37,237 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:37,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:00:56] 2025-10-12 17:42:37,617 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:41,066 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:00:56] 2025-10-12 17:42:41,264 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:00:56] 2025-10-12 17:42:41,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375560558400)>', '<ExcThread(monitor, started 140375217919744)>']
[2025-10-12 14:00:56] 2025-10-12 17:42:47,020 | INFO     | all workflow threads have been joined
[2025-10-12 14:00:56] 2025-10-12 17:42:47,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:00:56] 2025-10-12 17:42:47,021 | INFO     | traces error code: 0
[2025-10-12 14:00:56] 2025-10-12 17:42:47,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:00:56] 2025-10-12 17:43:04,633 | INFO     | PID=3565377 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:00:56] 2025-10-12 17:43:04,633 | INFO     | .. there are 23 such processes running
[2025-10-12 14:00:56] 2025-10-12 17:43:04,633 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:00:56] 2025-10-12 17:43:04,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:00:56] 2025-10-12 17:43:04,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:00:56] 2025-10-12 17:43:04,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:00:56] 2025-10-12 17:43:04,634 | INFO     | [monitor] control thread has ended
[2025-10-12 14:00:56] 2025-10-12 17:43:04,844 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:00:56] 2025-10-12 17:43:04,847 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:00:56] 2025-10-12 17:43:04,857 [wrapper] pilotpid: 3565377
[2025-10-12 14:00:56] 2025-10-12 17:43:04,864 [wrapper] Pilot exit status: 0
[2025-10-12 14:00:56] 2025-10-12 17:43:04,967 [wrapper] pandaids: 6839870025
[2025-10-12 14:00:56] 2025-10-12 17:43:05,088 [wrapper] cleanup supervisor_pilot 3870420 3565378
[2025-10-12 14:00:56] 2025-10-12 17:43:05,115 [wrapper] Test setup, not cleaning
[2025-10-12 14:00:56] 2025-10-12 17:43:05,131 [wrapper] apfmon messages muted
[2025-10-12 14:00:56] 2025-10-12 17:43:05,134 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:00:56] 2025-10-12 17:43:05,143 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:00:56]  *** Error codes and diagnostics ***
[2025-10-12 14:00:56]     "exeErrorCode": 0,
[2025-10-12 14:00:56]     "exeErrorDiag": "",
[2025-10-12 14:00:56]     "pilotErrorCode": 0,
[2025-10-12 14:00:56]     "pilotErrorDiag": "",
[2025-10-12 14:00:56]  *** Listing of results directory ***
[2025-10-12 14:00:56] total 408180
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 07:18 queuedata.json
[2025-10-12 14:00:56] -rwx------. 1 boincer umatlas     36292 Oct 12 07:18 runpilot2-wrapper.sh
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas       100 Oct 12 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:00:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 12:20 run_atlas
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas       105 Oct 12 12:20 job.xml
[2025-10-12 14:00:56] -rw-r--r--. 2 boincer umatlas 220971761 Oct 12 12:20 EVNT.46676267._003673.pool.root.1
[2025-10-12 14:00:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 12:20 shared
[2025-10-12 14:00:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 12:20 input.tar.gz
[2025-10-12 14:00:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:20 start_atlas.sh
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas         0 Oct 12 12:20 boinc_lockfile
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 12:20 pandaJob.out
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas    975528 Oct 12 12:21 agis_schedconf.cvmfs.json
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:00:56] drwx------. 5 boincer umatlas      4096 Oct 12 12:21 pilot3
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas 191054141 Oct 12 13:41 HITS.46676269._076999.pool.root.1
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas       529 Oct 12 13:41 boinc_task_state.xml
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas      1053 Oct 12 13:41 memory_monitor_summary.json
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas    354895 Oct 12 13:41 log.46676269._076999.job.log.tgz.1
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas      7811 Oct 12 13:42 heartbeat.json
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas        95 Oct 12 13:43 pilot_heartbeat.json
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas       823 Oct 12 13:43 pilotlog.txt
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas    666415 Oct 12 13:43 log.46676269._076999.job.log.1
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas       357 Oct 12 13:43 output.list
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas       620 Oct 12 13:43 runtime_log
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas   1044480 Oct 12 13:43 result.tar.gz
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas       657 Oct 12 13:43 YGjLDmAH9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmejTMDmc5fUWn.diag
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 13:43 runtime_log.err
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 14:00 init_data.xml
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas        27 Oct 12 14:00 wrapper_checkpoint.txt
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:00 boinc_mmap_file
[2025-10-12 14:00:56] -rw-r--r--. 1 boincer umatlas     22364 Oct 12 14:00 stderr.txt
[2025-10-12 14:00:56] HITS file was successfully produced:
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas 191054141 Oct 12 13:41 shared/HITS.pool.root.1
[2025-10-12 14:00:56]  *** Contents of shared directory: ***
[2025-10-12 14:00:56] total 403980
[2025-10-12 14:00:56] -rw-r--r--. 2 boincer umatlas 220971761 Oct 12 12:20 ATLAS.root_0
[2025-10-12 14:00:56] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 12:20 input.tar.gz
[2025-10-12 14:00:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 12:20 start_atlas.sh
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas 191054141 Oct 12 13:41 HITS.pool.root.1
[2025-10-12 14:00:56] -rw-------. 1 boincer umatlas   1044480 Oct 12 13:43 result.tar.gz
14:00:57 (3561353): run_atlas exited; CPU time 25225.012438
14:00:57 (3561353): called boinc_finish(0)

</stderr_txt>
]]>

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