Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:41 (2843287): wrapper (7.7.26015): starting
03:32:41 (2843287): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 03:32:41] Arguments: --nthreads 2
[2025-10-13 03:32:41] Threads: 2
[2025-10-13 03:32:41] Checking for CVMFS
[2025-10-13 03:32:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:32:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:32:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:32:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:32:41] 2.9.2.0 1447080 5014 59056 151643 2 57 26989422 36864001 0 130560 0 3037391 99.988 171510 828 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:32:41] CVMFS is ok
[2025-10-13 03:32:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:32:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:32:41] Further information can be found at the LHC@home message board.
[2025-10-13 03:32:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:32:41] Checking for apptainer binary...
[2025-10-13 03:32:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:32:41] Running /usr/bin/apptainer --version
[2025-10-13 03:32:41] apptainer version 1.4.1-1.1
[2025-10-13 03:32:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:32:41] legendA165
[2025-10-13 03:32:41] apptainer works
[2025-10-13 03:32:41] Set ATHENA_PROC_NUMBER=2
[2025-10-13 03:32:41] Set ATHENA_CORE_NUMBER=2
[2025-10-13 03:32:41] Starting ATLAS job with PandaID=6839987937
[2025-10-13 03:32:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:40:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:40:11] 2025-10-13 03:39:23,205 | INFO     | monitor loop #583: job 0:6839987937 is in state 'finished'
[2025-10-13 05:40:11] 2025-10-13 03:39:23,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:40:11] 2025-10-13 03:39:24,481 | INFO     | time since job start (7590s) is within the limit (172800.0s)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,203 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:40:11] 2025-10-13 03:39:25,203 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 4252.1134999999995
[2025-10-13 05:40:11] 2025-10-13 03:39:25,204 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839987937/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,204 | INFO     | extracted standard info from prmon json
[2025-10-13 05:40:11] 2025-10-13 03:39:25,204 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:40:11] 2025-10-13 03:39:25,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:40:11] 2025-10-13 03:39:25,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:40:11] 2025-10-13 03:39:25,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:40:11] 2025-10-13 03:39:25,205 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:40:11] 2025-10-13 03:39:25,205 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | sum of deviations: -8640806312.5
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | mean x: 1760322952.5
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | mean y: 2349593.2822580645
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | -- intersect: 25731852068.337734
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | intersect: 25731852068.337734
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | chi2: 1.613547294585255
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | sum of deviations: -7878847779.000003
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | mean x: 1760322800.0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | mean y: 2351286.344537815
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | -- intersect: 26546352298.823414
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | intersect: 26546352298.823414
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | chi2: 1.6119774431462937
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | current chi2=1.6119774431462937 (change=0.0972919383416512 %)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | right removable region: 118
[2025-10-13 05:40:11] 2025-10-13 03:39:25,206 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | sum of deviations: -23775054267.99997
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | mean x: 1760323105.0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | mean y: 2382388.949579832
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | -- intersect: 80101045493.94337
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | intersect: 80101045493.94337
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | chi2: 0.1603269848350638
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | current chi2=0.1603269848350638 (change=90.06369473190595 %)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | sum of deviations: -19892621214.500004
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | mean x: 1760323257.5
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | mean y: 2373001.2192982454
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | -- intersect: 76232190648.98705
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | intersect: 76232190648.98705
[2025-10-13 05:40:11] 2025-10-13 03:39:25,207 | INFO     | chi2: 0.15725025377243068
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | current chi2=0.15725025377243068 (change=1.9190350681130213 %)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | left removable region: 20
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | sum of deviations: -10705489081.000002
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | mean x: 1760323379.5
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | mean y: 2352186.9183673467
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | -- intersect: 64580790947.297615
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | intersect: 64580790947.297615
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | chi2: 0.12745104549680455
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | -- intersect: 64580790947.297615
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | current memory leak: -36.69 B/s (using 98 data points, chi2=0.13)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | could have reported an average CPU frequency of 4460 MHz (8 samples)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | ..............................
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . Timing measurements:
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . get job = 0 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . initial setup = 1 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . payload setup = 6 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . stage-in = 0 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . payload execution = 7556 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . stage-out = 0 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,208 | INFO     | . log creation = 0 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,209 | INFO     | ..............................
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | 
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | job summary report
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | --------------------------------------------------
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | PanDA job id: 6839987937
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | task id: 46676269
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | errors: (none)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | pilot state: finished 
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | transexitcode: 0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | exeerrorcode: 0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | exeerrordiag: 
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | exitcode: 0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | exitmsg: OK
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | cpuconsumptiontime: 14750 s
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | nevents: 400
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | neventsw: 0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | pid: 2853436
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | pgrp: 2853436
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | corecount: 2
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | event service: False
[2025-10-13 05:40:11] 2025-10-13 03:39:25,253 | INFO     | sizes: {0: 2348857, 5: 2349119, 10: 2349175, 7567: 2385892, 7568: 2385892, 7574: 2386086}
[2025-10-13 05:40:11] 2025-10-13 03:39:25,254 | INFO     | --------------------------------------------------
[2025-10-13 05:40:11] 2025-10-13 03:39:25,254 | INFO     | 
[2025-10-13 05:40:11] 2025-10-13 03:39:25,254 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | job 6839987937 has completed (purged errors)
[2025-10-13 05:40:11] 2025-10-13 03:39:25,265 | INFO     | overall cleanup function is called
[2025-10-13 05:40:11] 2025-10-13 03:39:26,268 | INFO     | --- collectZombieJob: --- 10, [2853436]
[2025-10-13 05:40:11] 2025-10-13 03:39:26,268 | INFO     | zombie collector waiting for pid 2853436
[2025-10-13 05:40:11] 2025-10-13 03:39:26,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:40:11] 2025-10-13 03:39:26,269 | INFO     | collected zombie processes
[2025-10-13 05:40:11] 2025-10-13 03:39:26,270 | INFO     | will attempt to kill all subprocesses of pid=2853436
[2025-10-13 05:40:11] 2025-10-13 03:39:26,311 | INFO     | process IDs to be killed: [2853436] (in reverse order)
[2025-10-13 05:40:11] 2025-10-13 03:39:26,333 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:40:11] 2025-10-13 03:39:26,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:40:11] 2025-10-13 03:39:26,334 | INFO     | did not find any defunct processes belonging to 2853436
[2025-10-13 05:40:11] 2025-10-13 03:39:26,335 | INFO     | did not find any defunct processes belonging to 2853436
[2025-10-13 05:40:11] 2025-10-13 03:39:26,335 | INFO     | ready for new job
[2025-10-13 05:40:11] 2025-10-13 03:39:26,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:40:11] 2025-10-13 03:39:26,336 | INFO     | ***************************************
[2025-10-13 05:40:11] 2025-10-13 03:39:26,336 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:40:11] 2025-10-13 03:39:26,336 | INFO     | ***************************************
[2025-10-13 05:40:11] 2025-10-13 03:39:26,336 | INFO     | 
[2025-10-13 05:40:11] 2025-10-13 03:39:26,336 | INFO     | architecture information:
[2025-10-13 05:40:11] 2025-10-13 03:39:26,336 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:40:11] 2025-10-13 03:39:26,344 | INFO     | cat /etc/os-release:
[2025-10-13 05:40:11] NAME="CentOS Linux"
[2025-10-13 05:40:11] VERSION="7 (Core)"
[2025-10-13 05:40:11] ID="centos"
[2025-10-13 05:40:11] ID_LIKE="rhel fedora"
[2025-10-13 05:40:11] VERSION_ID="7"
[2025-10-13 05:40:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:40:11] ANSI_COLOR="0;31"
[2025-10-13 05:40:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:40:11] HOME_URL="https://www.centos.org/"
[2025-10-13 05:40:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:40:11] 
[2025-10-13 05:40:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:40:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:40:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:40:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:40:11] 
[2025-10-13 05:40:11] 2025-10-13 03:39:26,344 | INFO     | ***************************************
[2025-10-13 05:40:11] 2025-10-13 03:39:26,847 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:40:11] 2025-10-13 03:39:26,877 | INFO     | sufficient remaining disk space (183087661056 B)
[2025-10-13 05:40:11] 2025-10-13 03:39:26,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:40:11] 2025-10-13 03:39:26,878 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:40:11] 2025-10-13 03:39:26,878 | INFO     | update_server=False
[2025-10-13 05:40:11] 2025-10-13 03:39:26,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:40:11] 2025-10-13 03:39:26,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:40:11] 2025-10-13 03:39:26,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:40:11] 2025-10-13 03:39:26,879 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:40:11] 2025-10-13 03:39:26,880 | INFO     | aborting loop
[2025-10-13 05:40:11] 2025-10-13 03:39:26,978 | INFO     | all payload control threads have been joined
[2025-10-13 05:40:11] 2025-10-13 03:39:27,261 | INFO     | all job control threads have been joined
[2025-10-13 05:40:11] 2025-10-13 03:39:27,637 | INFO     | all data control threads have been joined
[2025-10-13 05:40:11] 2025-10-13 03:39:27,883 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:27,884 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:27,884 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:27,895 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:27,984 | INFO     | [payload] control thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,033 | INFO     | [job] validate thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,267 | INFO     | [job] control thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,499 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,643 | INFO     | [data] control thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,885 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:28,945 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:29,228 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:29,368 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:29,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:40:11] 2025-10-13 03:39:33,926 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:36,995 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:40:11] 2025-10-13 03:39:38,001 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:40:11] 2025-10-13 03:39:57,598 | INFO     | PID=2847004 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:40:11] 2025-10-13 03:39:57,599 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:40:11] 2025-10-13 03:39:57,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:40:11] 2025-10-13 03:39:57,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:40:11] 2025-10-13 03:40:04,706 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:40:11] 2025-10-13 03:40:06,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686850996032)>', '<ExcThread(monitor, started 139686194427648)>']
[2025-10-13 05:40:11] 2025-10-13 03:40:07,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:40:11] 2025-10-13 03:40:07,647 | INFO     | [monitor] control thread has ended
[2025-10-13 05:40:11] 2025-10-13 03:40:11,816 | INFO     | all workflow threads have been joined
[2025-10-13 05:40:11] 2025-10-13 03:40:11,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:40:11] 2025-10-13 03:40:11,817 | INFO     | traces error code: 0
[2025-10-13 05:40:11] 2025-10-13 03:40:11,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:40:11] 2025-10-13 03:40:11,859 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:40:11] 2025-10-13 03:40:11,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:40:11] 2025-10-13 03:40:11,863 [wrapper] pilotpid: 2847004
[2025-10-13 05:40:11] 2025-10-13 03:40:11,865 [wrapper] Pilot exit status: 0
[2025-10-13 05:40:11] 2025-10-13 03:40:11,870 [wrapper] pandaids: 6839987937
[2025-10-13 05:40:11] 2025-10-13 03:40:11,884 [wrapper] cleanup supervisor_pilot 2873536 2847005
[2025-10-13 05:40:11] 2025-10-13 03:40:11,886 [wrapper] Test setup, not cleaning
[2025-10-13 05:40:11] 2025-10-13 03:40:11,888 [wrapper] apfmon messages muted
[2025-10-13 05:40:11] 2025-10-13 03:40:11,890 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:40:11] 2025-10-13 03:40:11,892 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:40:11]  *** Error codes and diagnostics ***
[2025-10-13 05:40:11]     "exeErrorCode": 0,
[2025-10-13 05:40:11]     "exeErrorDiag": "",
[2025-10-13 05:40:11]     "pilotErrorCode": 0,
[2025-10-13 05:40:11]     "pilotErrorDiag": "",
[2025-10-13 05:40:11]  *** Listing of results directory ***
[2025-10-13 05:40:11] total 409312
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:34 queuedata.json
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:35 pilot3.tar.gz
[2025-10-13 05:40:11] -rwx------ 1 boinc boinc     36292 Oct 12 14:36 runpilot2-wrapper.sh
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:40:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:32 run_atlas
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:32 job.xml
[2025-10-13 05:40:11] -rw-r--r-- 2 boinc boinc 220390048 Oct 13 03:32 EVNT.46676267._003794.pool.root.1
[2025-10-13 05:40:11] -rw-r--r-- 2 boinc boinc    569674 Oct 13 03:32 input.tar.gz
[2025-10-13 05:40:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:32 start_atlas.sh
[2025-10-13 05:40:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:32 shared
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:32 boinc_setup_complete
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc      6210 Oct 13 03:32 init_data.xml
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:32 boinc_lockfile
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc      2548 Oct 13 03:32 pandaJob.out
[2025-10-13 05:40:11] -rw------- 1 boinc boinc    975595 Oct 13 03:32 agis_schedconf.cvmfs.json
[2025-10-13 05:40:11] -rw------- 1 boinc boinc   1560580 Oct 13 03:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:40:11] drwx------ 5 boinc boinc      4096 Oct 13 03:32 pilot3
[2025-10-13 05:40:11] -rw------- 1 boinc boinc 192125611 Oct 13 05:38 HITS.46676269._078281.pool.root.1
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:39 boinc_task_state.xml
[2025-10-13 05:40:11] -rw------- 1 boinc boinc      1016 Oct 13 05:39 memory_monitor_summary.json
[2025-10-13 05:40:11] -rw------- 1 boinc boinc    262881 Oct 13 05:39 log.46676269._078281.job.log.tgz.1
[2025-10-13 05:40:11] -rw------- 1 boinc boinc      7762 Oct 13 05:39 heartbeat.json
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:39 boinc_mmap_file
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:39 wrapper_checkpoint.txt
[2025-10-13 05:40:11] -rw------- 1 boinc boinc        95 Oct 13 05:39 pilot_heartbeat.json
[2025-10-13 05:40:11] -rw------- 1 boinc boinc      4824 Oct 13 05:40 pilotlog.txt
[2025-10-13 05:40:11] -rw------- 1 boinc boinc   1093677 Oct 13 05:40 log.46676269._078281.job.log.1
[2025-10-13 05:40:11] -rw------- 1 boinc boinc       357 Oct 13 05:40 output.list
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:40 runtime_log
[2025-10-13 05:40:11] -rw------- 1 boinc boinc   1372160 Oct 13 05:40 result.tar.gz
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc      8797 Oct 13 05:40 runtime_log.err
[2025-10-13 05:40:11] -rw------- 1 boinc boinc       663 Oct 13 05:40 8wrNDmDUAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUnjNDmhopa1m.diag
[2025-10-13 05:40:11] -rw-r--r-- 1 boinc boinc     21085 Oct 13 05:40 stderr.txt
[2025-10-13 05:40:11] HITS file was successfully produced:
[2025-10-13 05:40:11] -rw------- 1 boinc boinc 192125611 Oct 13 05:38 shared/HITS.pool.root.1
[2025-10-13 05:40:11]  *** Contents of shared directory: ***
[2025-10-13 05:40:11] total 404776
[2025-10-13 05:40:11] -rw-r--r-- 2 boinc boinc 220390048 Oct 13 03:32 ATLAS.root_0
[2025-10-13 05:40:11] -rw-r--r-- 2 boinc boinc    569674 Oct 13 03:32 input.tar.gz
[2025-10-13 05:40:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:32 start_atlas.sh
[2025-10-13 05:40:11] -rw------- 1 boinc boinc 192125611 Oct 13 05:38 HITS.pool.root.1
[2025-10-13 05:40:11] -rw------- 1 boinc boinc   1372160 Oct 13 05:40 result.tar.gz
05:40:13 (2843287): run_atlas exited; CPU time 14791.774027
05:40:13 (2843287): called boinc_finish(0)

</stderr_txt>
]]>

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