Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:00:40 (32256): wrapper (7.7.26015): starting
12:00:40 (32256): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 12:00:40] Arguments: --nthreads 8
[2025-10-12 12:00:40] Threads: 8
[2025-10-12 12:00:40] Checking for CVMFS
[2025-10-12 12:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:00:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:00:41] 2.11.2.0 2876 206057 78952 151625 0 57 12080474 20275200 1 130560 3 73310473 99.977 10699263 9860 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:00:41] CVMFS is ok
[2025-10-12 12:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:00:41] Further information can be found at the LHC@home message board.
[2025-10-12 12:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:00:41] Checking for apptainer binary...
[2025-10-12 12:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:00:41] Running /usr/bin/apptainer --version
[2025-10-12 12:00:41] apptainer version 1.3.2-1.el7
[2025-10-12 12:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:00:42] c-204-5.aglt2.org
[2025-10-12 12:00:42] apptainer works
[2025-10-12 12:00:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 12:00:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 12:00:42] Starting ATLAS job with PandaID=6839987791
[2025-10-12 12:00:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:04:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:04:16] 2025-10-12 18:03:09,782 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:04:16] 2025-10-12 18:03:09,784 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:04:16] 2025-10-12 18:03:09,785 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,786 | INFO     | sum of deviations: -7600231682.000002
[2025-10-12 14:04:16] 2025-10-12 18:03:09,786 | INFO     | mean x: 1760288519.5
[2025-10-12 14:04:16] 2025-10-12 18:03:09,786 | INFO     | mean y: 2494730.4
[2025-10-12 14:04:16] 2025-10-12 18:03:09,786 | INFO     | -- intersect: 24972502996.86879
[2025-10-12 14:04:16] 2025-10-12 18:03:09,786 | INFO     | intersect: 24972502996.86879
[2025-10-12 14:04:16] 2025-10-12 18:03:09,787 | INFO     | chi2: 2.4138874597192332
[2025-10-12 14:04:16] 2025-10-12 18:03:09,787 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,788 | INFO     | sum of deviations: 1098514717.9999945
[2025-10-12 14:04:16] 2025-10-12 18:03:09,788 | INFO     | mean x: 1760288367.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,788 | INFO     | mean y: 2514715.3826086954
[2025-10-12 14:04:16] 2025-10-12 18:03:09,788 | INFO     | -- intersect: -4098115373.2711554
[2025-10-12 14:04:16] 2025-10-12 18:03:09,788 | INFO     | intersect: -4098115373.2711554
[2025-10-12 14:04:16] 2025-10-12 18:03:09,789 | INFO     | chi2: 1.5502663469928248
[2025-10-12 14:04:16] 2025-10-12 18:03:09,789 | INFO     | current chi2=1.5502663469928248 (change=35.77719040915267 %)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,789 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 14:04:16] 2025-10-12 18:03:09,790 | INFO     | sum of deviations: 1273000460.000001
[2025-10-12 14:04:16] 2025-10-12 18:03:09,790 | INFO     | mean x: 1760288214.5
[2025-10-12 14:04:16] 2025-10-12 18:03:09,790 | INFO     | mean y: 2515167.690909091
[2025-10-12 14:04:16] 2025-10-12 18:03:09,790 | INFO     | -- intersect: -5427383889.092195
[2025-10-12 14:04:16] 2025-10-12 18:03:09,790 | INFO     | intersect: -5427383889.092195
[2025-10-12 14:04:16] 2025-10-12 18:03:09,791 | INFO     | chi2: 1.551890423807553
[2025-10-12 14:04:16] 2025-10-12 18:03:09,791 | INFO     | current chi2=1.551890423807553 (change=-0.10476114752013774 %)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,791 | INFO     | right removable region: 109
[2025-10-12 14:04:16] 2025-10-12 18:03:09,791 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,792 | INFO     | sum of deviations: -24737550576.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,792 | INFO     | mean x: 1760288672.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,792 | INFO     | mean y: 2534611.347826087
[2025-10-12 14:04:16] 2025-10-12 18:03:09,792 | INFO     | -- intersect: 92345004061.69572
[2025-10-12 14:04:16] 2025-10-12 18:03:09,792 | INFO     | intersect: 92345004061.69572
[2025-10-12 14:04:16] 2025-10-12 18:03:09,793 | INFO     | chi2: 1.0179932336562714
[2025-10-12 14:04:16] 2025-10-12 18:03:09,793 | INFO     | current chi2=1.0179932336562714 (change=57.82764314229143 %)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,793 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 14:04:16] 2025-10-12 18:03:09,794 | INFO     | sum of deviations: -21299228205.5
[2025-10-12 14:04:16] 2025-10-12 18:03:09,794 | INFO     | mean x: 1760288824.5
[2025-10-12 14:04:16] 2025-10-12 18:03:09,794 | INFO     | mean y: 2525680.7181818183
[2025-10-12 14:04:16] 2025-10-12 18:03:09,794 | INFO     | -- intersect: 90853002844.60678
[2025-10-12 14:04:16] 2025-10-12 18:03:09,794 | INFO     | intersect: 90853002844.60678
[2025-10-12 14:04:16] 2025-10-12 18:03:09,795 | INFO     | chi2: 1.0159693404349746
[2025-10-12 14:04:16] 2025-10-12 18:03:09,795 | INFO     | current chi2=1.0159693404349746 (change=0.19881205045221223 %)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,795 | INFO     | left removable region: 20
[2025-10-12 14:04:16] 2025-10-12 18:03:09,795 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,796 | INFO     | sum of deviations: -5154403863.999995
[2025-10-12 14:04:16] 2025-10-12 18:03:09,796 | INFO     | mean x: 1760288794.0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,796 | INFO     | mean y: 2526469.146067416
[2025-10-12 14:04:16] 2025-10-12 18:03:09,796 | INFO     | -- intersect: 41514057940.94469
[2025-10-12 14:04:16] 2025-10-12 18:03:09,796 | INFO     | intersect: 41514057940.94469
[2025-10-12 14:04:16] 2025-10-12 18:03:09,797 | INFO     | chi2: 0.06930682735645005
[2025-10-12 14:04:16] 2025-10-12 18:03:09,797 | INFO     | -- intersect: 41514057940.94469
[2025-10-12 14:04:16] 2025-10-12 18:03:09,797 | INFO     | current memory leak: -23.58 B/s (using 89 data points, chi2=0.07)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,797 | INFO     | could have reported an average CPU frequency of 1971 MHz (7 samples)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | ..............................
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | . Timing measurements:
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | . get job = 0 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | . initial setup = 2 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | . payload setup = 7 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | . stage-in = 0 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,798 | INFO     | . payload execution = 7291 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,799 | INFO     | . stage-out = 0 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,799 | INFO     | . log creation = 0 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,799 | INFO     | ..............................
[2025-10-12 14:04:16] 2025-10-12 18:03:09,891 | INFO     | 
[2025-10-12 14:04:16] 2025-10-12 18:03:09,892 | INFO     | job summary report
[2025-10-12 14:04:16] 2025-10-12 18:03:09,892 | INFO     | --------------------------------------------------
[2025-10-12 14:04:16] 2025-10-12 18:03:09,892 | INFO     | PanDA job id: 6839987791
[2025-10-12 14:04:16] 2025-10-12 18:03:09,892 | INFO     | task id: 46676269
[2025-10-12 14:04:16] 2025-10-12 18:03:09,892 | INFO     | errors: (none)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | pilot state: finished 
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | transexitcode: 0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | exeerrorcode: 0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | exeerrordiag: 
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | exitcode: 0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | exitmsg: OK
[2025-10-12 14:04:16] 2025-10-12 18:03:09,893 | INFO     | cpuconsumptiontime: 55249 s
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | nevents: 400
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | neventsw: 0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | pid: 10062
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | pgrp: 10062
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | corecount: 8
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | event service: False
[2025-10-12 14:04:16] 2025-10-12 18:03:09,894 | INFO     | sizes: {0: 2348801, 6: 2349063, 11: 2349091, 7303: 2376369, 7304: 2385367, 7306: 2385451, 7314: 2385773}
[2025-10-12 14:04:16] 2025-10-12 18:03:09,895 | INFO     | --------------------------------------------------
[2025-10-12 14:04:16] 2025-10-12 18:03:09,895 | INFO     | 
[2025-10-12 14:04:16] 2025-10-12 18:03:09,895 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:04:16] 2025-10-12 18:03:09,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,926 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,926 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,926 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,926 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 18:03:09,929 | INFO     | job 6839987791 has completed (purged errors)
[2025-10-12 14:04:16] 2025-10-12 18:03:09,929 | INFO     | overall cleanup function is called
[2025-10-12 14:04:16] 2025-10-12 18:03:10,933 | INFO     | --- collectZombieJob: --- 10, [10062]
[2025-10-12 14:04:16] 2025-10-12 18:03:10,933 | INFO     | zombie collector waiting for pid 10062
[2025-10-12 14:04:16] 2025-10-12 18:03:10,934 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:04:16] 2025-10-12 18:03:10,934 | INFO     | collected zombie processes
[2025-10-12 14:04:16] 2025-10-12 18:03:10,934 | INFO     | will attempt to kill all subprocesses of pid=10062
[2025-10-12 14:04:16] 2025-10-12 18:03:11,027 | INFO     | process IDs to be killed: [10062] (in reverse order)
[2025-10-12 14:04:16] 2025-10-12 18:03:11,078 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:04:16] 2025-10-12 18:03:11,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:04:16] 2025-10-12 18:03:11,082 | INFO     | did not find any defunct processes belonging to 10062
[2025-10-12 14:04:16] 2025-10-12 18:03:11,085 | INFO     | did not find any defunct processes belonging to 10062
[2025-10-12 14:04:16] 2025-10-12 18:03:11,085 | INFO     | ready for new job
[2025-10-12 14:04:16] 2025-10-12 18:03:11,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:04:16] 2025-10-12 18:03:11,087 | INFO     | ***************************************
[2025-10-12 14:04:16] 2025-10-12 18:03:11,087 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:04:16] 2025-10-12 18:03:11,087 | INFO     | ***************************************
[2025-10-12 14:04:16] 2025-10-12 18:03:11,088 | INFO     | 
[2025-10-12 14:04:16] 2025-10-12 18:03:11,088 | INFO     | architecture information:
[2025-10-12 14:04:16] 2025-10-12 18:03:11,089 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:04:16] 2025-10-12 18:03:11,106 | INFO     | cat /etc/os-release:
[2025-10-12 14:04:16] NAME="CentOS Linux"
[2025-10-12 14:04:16] VERSION="7 (Core)"
[2025-10-12 14:04:16] ID="centos"
[2025-10-12 14:04:16] ID_LIKE="rhel fedora"
[2025-10-12 14:04:16] VERSION_ID="7"
[2025-10-12 14:04:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:04:16] ANSI_COLOR="0;31"
[2025-10-12 14:04:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:04:16] HOME_URL="https://www.centos.org/"
[2025-10-12 14:04:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:04:16] 
[2025-10-12 14:04:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:04:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:04:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:04:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:04:16] 
[2025-10-12 14:04:16] 2025-10-12 18:03:11,106 | INFO     | ***************************************
[2025-10-12 14:04:16] 2025-10-12 18:03:11,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:04:16] 2025-10-12 18:03:11,629 | INFO     | sufficient remaining disk space (18590203904 B)
[2025-10-12 14:04:16] 2025-10-12 18:03:11,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:04:16] 2025-10-12 18:03:11,630 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:04:16] 2025-10-12 18:03:11,630 | INFO     | update_server=False
[2025-10-12 14:04:16] 2025-10-12 18:03:11,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:04:16] 2025-10-12 18:03:11,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 18:03:11,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 18:03:11,662 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:04:16] 2025-10-12 18:03:11,662 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:04:16] 2025-10-12 18:03:11,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 18:03:11,663 | INFO     | will abort loop
[2025-10-12 14:04:16] 2025-10-12 18:03:11,817 | INFO     | all data control threads have been joined
[2025-10-12 14:04:16] 2025-10-12 18:03:11,960 | INFO     | all payload control threads have been joined
[2025-10-12 14:04:16] 2025-10-12 18:03:12,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 18:03:12,636 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:12,637 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:12,668 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:12,819 | INFO     | [data] control thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:12,966 | INFO     | [payload] control thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:12,984 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,107 | INFO     | all job control threads have been joined
[2025-10-12 14:04:16] 2025-10-12 18:03:13,496 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,511 | INFO     | [job] validate thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,637 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,642 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,645 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,707 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:13,714 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:14,112 | INFO     | [job] control thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:16,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:21,689 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:04:16] 2025-10-12 18:03:22,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:04:16] 2025-10-12 18:03:42,397 | INFO     | PID=3635 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:04:16] 2025-10-12 18:03:42,398 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:04:16] 2025-10-12 18:03:42,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:04:16] 2025-10-12 18:03:42,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:04:16] 2025-10-12 18:04:10,784 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:04:16] 2025-10-12 18:04:11,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698627016512)>', '<ExcThread(monitor, started 140697785050880)>']
[2025-10-12 14:04:16] 2025-10-12 18:04:11,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:04:16] 2025-10-12 18:04:11,543 | INFO     | [monitor] control thread has ended
[2025-10-12 14:04:16] 2025-10-12 18:04:16,470 | INFO     | all workflow threads have been joined
[2025-10-12 14:04:16] 2025-10-12 18:04:16,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:04:16] 2025-10-12 18:04:16,473 | INFO     | traces error code: 0
[2025-10-12 14:04:16] 2025-10-12 18:04:16,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:04:16] 2025-10-12 18:04:16,597 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:04:16] 2025-10-12 18:04:16,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:04:16] 2025-10-12 18:04:16,606 [wrapper] pilotpid: 3635
[2025-10-12 14:04:16] 2025-10-12 18:04:16,611 [wrapper] Pilot exit status: 0
[2025-10-12 14:04:16] 2025-10-12 18:04:16,626 [wrapper] pandaids: 6839987791
[2025-10-12 14:04:16] 2025-10-12 18:04:16,677 [wrapper] cleanup supervisor_pilot  5896 3636
[2025-10-12 14:04:16] 2025-10-12 18:04:16,681 [wrapper] Test setup, not cleaning
[2025-10-12 14:04:16] 2025-10-12 18:04:16,686 [wrapper] apfmon messages muted
[2025-10-12 14:04:16] 2025-10-12 18:04:16,690 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:04:16] 2025-10-12 18:04:16,695 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:04:16]  *** Error codes and diagnostics ***
[2025-10-12 14:04:16]     "exeErrorCode": 0,
[2025-10-12 14:04:16]     "exeErrorDiag": "",
[2025-10-12 14:04:16]     "pilotErrorCode": 0,
[2025-10-12 14:04:16]     "pilotErrorDiag": "",
[2025-10-12 14:04:16]  *** Listing of results directory ***
[2025-10-12 14:04:16] total 408616
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:10 pilot3.tar.gz
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:27 queuedata.json
[2025-10-12 14:04:16] -rwx------ 1 boincer umatlas     36292 Oct 12 08:28 runpilot2-wrapper.sh
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:04:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:00 run_atlas
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:00 job.xml
[2025-10-12 14:04:16] -rw-r--r-- 2 boincer umatlas 222308659 Oct 12 12:00 EVNT.46676267._001053.pool.root.1
[2025-10-12 14:04:16] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:00 shared
[2025-10-12 14:04:16] -rw-r--r-- 2 boincer umatlas    569688 Oct 12 12:00 input.tar.gz
[2025-10-12 14:04:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:00 start_atlas.sh
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:00 boinc_lockfile
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas      2547 Oct 12 12:00 pandaJob.out
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas    975528 Oct 12 12:00 agis_schedconf.cvmfs.json
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas   1560580 Oct 12 12:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:04:16] drwx------ 5 boincer umatlas      4096 Oct 12 12:00 pilot3
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 14:02 init_data.xml
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas 189440803 Oct 12 14:02 HITS.46676269._078135.pool.root.1
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas        95 Oct 12 14:02 pilot_heartbeat.json
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:02 boinc_task_state.xml
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas      1049 Oct 12 14:02 memory_monitor_summary.json
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas    348922 Oct 12 14:02 log.46676269._078135.job.log.tgz.1
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas      7845 Oct 12 14:03 heartbeat.json
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:03 boinc_mmap_file
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:03 wrapper_checkpoint.txt
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas      5003 Oct 12 14:04 pilotlog.txt
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas   1030591 Oct 12 14:04 log.46676269._078135.job.log.1
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas       357 Oct 12 14:04 output.list
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:04 runtime_log
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas   1402880 Oct 12 14:04 result.tar.gz
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas       658 Oct 12 14:04 Z0cKDm1MAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtljNDmSMCw8m.diag
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 14:04 runtime_log.err
[2025-10-12 14:04:16] -rw-r--r-- 1 boincer umatlas     20861 Oct 12 14:04 stderr.txt
[2025-10-12 14:04:16] HITS file was successfully produced:
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas 189440803 Oct 12 14:02 shared/HITS.pool.root.1
[2025-10-12 14:04:16]  *** Contents of shared directory: ***
[2025-10-12 14:04:16] total 404060
[2025-10-12 14:04:16] -rw-r--r-- 2 boincer umatlas 222308659 Oct 12 12:00 ATLAS.root_0
[2025-10-12 14:04:16] -rw-r--r-- 2 boincer umatlas    569688 Oct 12 12:00 input.tar.gz
[2025-10-12 14:04:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:00 start_atlas.sh
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas 189440803 Oct 12 14:02 HITS.pool.root.1
[2025-10-12 14:04:16] -rw------- 1 boincer umatlas   1402880 Oct 12 14:04 result.tar.gz
14:04:17 (32256): run_atlas exited; CPU time 55213.869903
14:04:17 (32256): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN