Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:45 (21907): wrapper (7.7.26015): starting
10:57:45 (21907): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 10:57:45] Arguments: --nthreads 8
[2025-10-13 10:57:45] Threads: 8
[2025-10-13 10:57:45] Checking for CVMFS
[2025-10-13 10:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:57:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:57:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:57:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:57:48] 2.11.2.0 15429 108605 133956 151654 2 60 20282350 25165825 4632 130560 0 38982797 99.890 17892446 2603 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 10:57:48] CVMFS is ok
[2025-10-13 10:57:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:57:48] Checking for apptainer binary...
[2025-10-13 10:57:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:57:48] Running /usr/bin/apptainer --version
[2025-10-13 10:57:48] apptainer version 1.3.2-1.el7
[2025-10-13 10:57:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:57:57] cg-vwn283.simple-grid.lan
[2025-10-13 10:57:57] apptainer works
[2025-10-13 10:57:57] Set ATHENA_PROC_NUMBER=8
[2025-10-13 10:57:57] Set ATHENA_CORE_NUMBER=8
[2025-10-13 10:57:57] Starting ATLAS job with PandaID=6839821362
[2025-10-13 10:57:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:15:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:15:00] 2025-10-13 13:14:12,000 | INFO     | fitting pss+swap vs Time
[2025-10-13 15:15:00] 2025-10-13 13:14:12,001 | INFO     | sum of square deviations: 4286517580.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,003 | INFO     | sum of deviations: 75352882455.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,003 | INFO     | mean x: 1760353846.5
[2025-10-13 15:15:00] 2025-10-13 13:14:12,003 | INFO     | mean y: 2423828.725
[2025-10-13 15:15:00] 2025-10-13 13:14:12,003 | INFO     | -- intersect: -30942914432.204662
[2025-10-13 15:15:00] 2025-10-13 13:14:12,003 | INFO     | intersect: -30942914432.204662
[2025-10-13 15:15:00] 2025-10-13 13:14:12,004 | INFO     | chi2: 6.817634717944661
[2025-10-13 15:15:00] 2025-10-13 13:14:12,004 | INFO     | sum of square deviations: 4024149870.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,006 | INFO     | sum of deviations: 105919830870.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,006 | INFO     | mean x: 1760353694.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,006 | INFO     | mean y: 2441358.310638298
[2025-10-13 15:15:00] 2025-10-13 13:14:12,007 | INFO     | -- intersect: -46331907898.880356
[2025-10-13 15:15:00] 2025-10-13 13:14:12,007 | INFO     | intersect: -46331907898.880356
[2025-10-13 15:15:00] 2025-10-13 13:14:12,007 | INFO     | chi2: 5.250675246010586
[2025-10-13 15:15:00] 2025-10-13 13:14:12,007 | INFO     | current chi2=5.250675246010586 (change=22.983916515939008 %)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,007 | INFO     | right removable region: 234
[2025-10-13 15:15:00] 2025-10-13 13:14:12,008 | INFO     | sum of square deviations: 4024149870.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,017 | INFO     | sum of deviations: -3462736675.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,020 | INFO     | mean x: 1760353999.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,021 | INFO     | mean y: 2469592.668085106
[2025-10-13 15:15:00] 2025-10-13 13:14:12,021 | INFO     | -- intersect: 1517234835.0769653
[2025-10-13 15:15:00] 2025-10-13 13:14:12,021 | INFO     | intersect: 1517234835.0769653
[2025-10-13 15:15:00] 2025-10-13 13:14:12,021 | INFO     | chi2: 2.5656301984013754
[2025-10-13 15:15:00] 2025-10-13 13:14:12,021 | INFO     | current chi2=2.5656301984013754 (change=62.3677374258789 %)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,022 | INFO     | sum of square deviations: 3772712597.5
[2025-10-13 15:15:00] 2025-10-13 13:14:12,024 | INFO     | sum of deviations: -36000917200.5
[2025-10-13 15:15:00] 2025-10-13 13:14:12,024 | INFO     | mean x: 1760354151.5
[2025-10-13 15:15:00] 2025-10-13 13:14:12,024 | INFO     | mean y: 2489221.7347826087
[2025-10-13 15:15:00] 2025-10-13 13:14:12,024 | INFO     | -- intersect: 16800578769.744125
[2025-10-13 15:15:00] 2025-10-13 13:14:12,024 | INFO     | intersect: 16800578769.744125
[2025-10-13 15:15:00] 2025-10-13 13:14:12,025 | INFO     | chi2: 1.7371183075974486
[2025-10-13 15:15:00] 2025-10-13 13:14:12,025 | INFO     | current chi2=1.7371183075974486 (change=32.29272446668917 %)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,025 | INFO     | sum of square deviations: 3531973200.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,027 | INFO     | sum of deviations: -40303337999.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,027 | INFO     | mean x: 1760354304.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,027 | INFO     | mean y: 2491912.16
[2025-10-13 15:15:00] 2025-10-13 13:14:12,027 | INFO     | -- intersect: 20089890795.058205
[2025-10-13 15:15:00] 2025-10-13 13:14:12,027 | INFO     | intersect: 20089890795.058205
[2025-10-13 15:15:00] 2025-10-13 13:14:12,028 | INFO     | chi2: 1.7026578743971432
[2025-10-13 15:15:00] 2025-10-13 13:14:12,028 | INFO     | current chi2=1.7026578743971432 (change=1.9837700776964604 %)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,028 | INFO     | left removable region: 30
[2025-10-13 15:15:00] 2025-10-13 13:14:12,028 | INFO     | sum of square deviations: 2632440055.0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,030 | INFO     | sum of deviations: -6689410700.5
[2025-10-13 15:15:00] 2025-10-13 13:14:12,030 | INFO     | mean x: 1760354578.5
[2025-10-13 15:15:00] 2025-10-13 13:14:12,030 | INFO     | mean y: 2510270.5833333335
[2025-10-13 15:15:00] 2025-10-13 13:14:12,030 | INFO     | -- intersect: 4475825714.832667
[2025-10-13 15:15:00] 2025-10-13 13:14:12,030 | INFO     | intersect: 4475825714.832667
[2025-10-13 15:15:00] 2025-10-13 13:14:12,031 | INFO     | chi2: 0.01536667346911957
[2025-10-13 15:15:00] 2025-10-13 13:14:12,031 | INFO     | -- intersect: 4475825714.832667
[2025-10-13 15:15:00] 2025-10-13 13:14:12,031 | INFO     | current memory leak: -2.54 B/s (using 204 data points, chi2=0.02)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | ..............................
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . Timing measurements:
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . get job = 0 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . initial setup = 10 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . payload setup = 126 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . stage-in = 0 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . payload execution = 14737 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,032 | INFO     | . stage-out = 3 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,033 | INFO     | . log creation = 1 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,037 | INFO     | ..............................
[2025-10-13 15:15:00] 2025-10-13 13:14:12,157 | INFO     | 
[2025-10-13 15:15:00] 2025-10-13 13:14:12,157 | INFO     | job summary report
[2025-10-13 15:15:00] 2025-10-13 13:14:12,157 | INFO     | --------------------------------------------------
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | PanDA job id: 6839821362
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | task id: 46676269
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | errors: (none)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | pilot state: finished 
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | transexitcode: 0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | exeerrorcode: 0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | exeerrordiag: 
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | exitcode: 0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | exitmsg: OK
[2025-10-13 15:15:00] 2025-10-13 13:14:12,158 | INFO     | cpuconsumptiontime: 54051 s
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | nevents: 400
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | neventsw: 0
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | pid: 32286
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | pgrp: 32286
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | corecount: 8
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | event service: False
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | sizes: {0: 2348029, 1: 2348886, 2: 2348886, 12: 2348914, 23: 2348942, 34: 2348970, 44: 2349126, 55: 2349154, 66: 2349182, 77: 2349210, 87: 2349266, 94: 2349836, 98
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | --------------------------------------------------
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | 
[2025-10-13 15:15:00] 2025-10-13 13:14:12,159 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:15:00] 2025-10-13 13:14:12,549 | INFO     | job 6839821362 has completed (purged errors)
[2025-10-13 15:15:00] 2025-10-13 13:14:12,549 | INFO     | overall cleanup function is called
[2025-10-13 15:15:00] 2025-10-13 13:14:13,123 | INFO     | PID=25710 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 15:15:00] 2025-10-13 13:14:13,124 | INFO     | .. there are 9 such processes running
[2025-10-13 15:15:00] 2025-10-13 13:14:13,561 | INFO     | --- collectZombieJob: --- 10, [32286]
[2025-10-13 15:15:00] 2025-10-13 13:14:13,561 | INFO     | zombie collector waiting for pid 32286
[2025-10-13 15:15:00] 2025-10-13 13:14:13,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:15:00] 2025-10-13 13:14:13,562 | INFO     | collected zombie processes
[2025-10-13 15:15:00] 2025-10-13 13:14:13,562 | INFO     | will attempt to kill all subprocesses of pid=32286
[2025-10-13 15:15:00] 2025-10-13 13:14:13,686 | INFO     | process IDs to be killed: [32286] (in reverse order)
[2025-10-13 15:15:00] 2025-10-13 13:14:14,638 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:15:00] 2025-10-13 13:14:14,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:15:00] 2025-10-13 13:14:14,642 | INFO     | did not find any defunct processes belonging to 32286
[2025-10-13 15:15:00] 2025-10-13 13:14:14,649 | INFO     | did not find any defunct processes belonging to 32286
[2025-10-13 15:15:00] 2025-10-13 13:14:14,650 | INFO     | ready for new job
[2025-10-13 15:15:00] 2025-10-13 13:14:14,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:15:00] 2025-10-13 13:14:14,652 | INFO     | ***************************************
[2025-10-13 15:15:00] 2025-10-13 13:14:14,652 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:15:00] 2025-10-13 13:14:14,652 | INFO     | ***************************************
[2025-10-13 15:15:00] 2025-10-13 13:14:14,652 | INFO     | 
[2025-10-13 15:15:00] 2025-10-13 13:14:14,653 | INFO     | pilot is running in a VM
[2025-10-13 15:15:00] 2025-10-13 13:14:14,653 | INFO     | architecture information:
[2025-10-13 15:15:00] 2025-10-13 13:14:14,655 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:15:00] 2025-10-13 13:14:14,825 | INFO     | cat /etc/os-release:
[2025-10-13 15:15:00] NAME="CentOS Linux"
[2025-10-13 15:15:00] VERSION="7 (Core)"
[2025-10-13 15:15:00] ID="centos"
[2025-10-13 15:15:00] ID_LIKE="rhel fedora"
[2025-10-13 15:15:00] VERSION_ID="7"
[2025-10-13 15:15:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:15:00] ANSI_COLOR="0;31"
[2025-10-13 15:15:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:15:00] HOME_URL="https://www.centos.org/"
[2025-10-13 15:15:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:15:00] 
[2025-10-13 15:15:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:15:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:15:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:15:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:15:00] 
[2025-10-13 15:15:00] 2025-10-13 13:14:14,825 | INFO     | ***************************************
[2025-10-13 15:15:00] 2025-10-13 13:14:15,328 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-10-13 15:15:00] 2025-10-13 13:14:15,484 | INFO     | sufficient remaining disk space (494854471680 B)
[2025-10-13 15:15:00] 2025-10-13 13:14:15,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:15:00] 2025-10-13 13:14:15,484 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:15:00] 2025-10-13 13:14:15,484 | INFO     | update_server=False
[2025-10-13 15:15:00] 2025-10-13 13:14:15,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:15:00] 2025-10-13 13:14:15,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:15:00] 2025-10-13 13:14:15,724 | INFO     | aborting loop
[2025-10-13 15:15:00] 2025-10-13 13:14:15,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:15:00] 2025-10-13 13:14:15,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:15:00] 2025-10-13 13:14:16,161 | INFO     | all data control threads have been joined
[2025-10-13 15:15:00] 2025-10-13 13:14:16,229 | INFO     | all payload control threads have been joined
[2025-10-13 15:15:00] 2025-10-13 13:14:16,335 | INFO     | all job control threads have been joined
[2025-10-13 15:15:00] 2025-10-13 13:14:16,490 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:16,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:16,732 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:16,803 | INFO     | [job] validate thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,167 | INFO     | [data] control thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:15:00] 2025-10-13 13:14:17,235 | INFO     | [payload] control thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,341 | INFO     | [job] control thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,415 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,470 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,570 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,597 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,767 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,835 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:17,890 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:18,177 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:19,957 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:15:00] 2025-10-13 13:14:45,315 | INFO     | PID=25710 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 15:15:00] 2025-10-13 13:14:45,315 | INFO     | .. there are 9 such processes running
[2025-10-13 15:15:00] 2025-10-13 13:14:45,317 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:15:00] 2025-10-13 13:14:45,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:15:00] 2025-10-13 13:14:45,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:15:00] 2025-10-13 13:14:52,411 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:15:00] 2025-10-13 13:14:53,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003191469888)>', '<ExcThread(monitor, started 140002738546432)>']
[2025-10-13 15:15:00] 2025-10-13 13:14:53,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:15:00] 2025-10-13 13:14:53,364 | INFO     | [monitor] control thread has ended
[2025-10-13 15:15:00] 2025-10-13 13:14:58,314 | INFO     | all workflow threads have been joined
[2025-10-13 15:15:00] 2025-10-13 13:14:58,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:15:00] 2025-10-13 13:14:58,315 | INFO     | traces error code: 0
[2025-10-13 15:15:00] 2025-10-13 13:14:58,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:15:00] 2025-10-13 13:14:58,662 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:15:00] 2025-10-13 13:14:58,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:15:00] 2025-10-13 13:14:58,846 [wrapper] pilotpid: 25710
[2025-10-13 15:15:00] 2025-10-13 13:14:58,963 [wrapper] Pilot exit status: 0
[2025-10-13 15:15:00] 2025-10-13 13:14:59,319 [wrapper] pandaids: 6839821362
[2025-10-13 15:15:00] 2025-10-13 13:14:59,469 [wrapper] cleanup supervisor_pilot 24704 25711
[2025-10-13 15:15:00] 2025-10-13 13:14:59,533 [wrapper] Test setup, not cleaning
[2025-10-13 15:15:00] 2025-10-13 13:14:59,554 [wrapper] apfmon messages muted
[2025-10-13 15:15:00] 2025-10-13 13:14:59,558 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:15:00] 2025-10-13 13:14:59,564 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:15:00]  *** Error codes and diagnostics ***
[2025-10-13 15:15:00]     "exeErrorCode": 0,
[2025-10-13 15:15:00]     "exeErrorDiag": "",
[2025-10-13 15:15:00]     "pilotErrorCode": 0,
[2025-10-13 15:15:00]     "pilotErrorDiag": "",
[2025-10-13 15:15:00]  *** Listing of results directory ***
[2025-10-13 15:15:00] total 411120
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc      5112 Oct 12 11:06 queuedata.json
[2025-10-13 15:15:00] -rwx------. 1 boinc boinc     36292 Oct 12 11:08 runpilot2-wrapper.sh
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc       100 Oct 13 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:15:00] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 10:57 run_atlas
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc       105 Oct 13 10:57 job.xml
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc      6388 Oct 13 10:57 init_data.xml
[2025-10-13 15:15:00] -rw-r--r--. 2 boinc boinc 220923032 Oct 13 10:57 EVNT.46676267._003562.pool.root.1
[2025-10-13 15:15:00] -rw-r--r--. 2 boinc boinc     15120 Oct 13 10:57 start_atlas.sh
[2025-10-13 15:15:00] drwxrwx--x. 2 boinc boinc        68 Oct 13 10:57 shared
[2025-10-13 15:15:00] -rw-r--r--. 2 boinc boinc    569684 Oct 13 10:57 input.tar.gz
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc         0 Oct 13 10:57 boinc_lockfile
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc      2550 Oct 13 10:57 pandaJob.out
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc    972857 Oct 13 11:01 agis_schedconf.cvmfs.json
[2025-10-13 15:15:00] drwx------. 5 boinc boinc      4096 Oct 13 11:01 pilot3
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc 191172269 Oct 13 15:10 HITS.46676269._075050.pool.root.1
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc       531 Oct 13 15:11 boinc_task_state.xml
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc      1019 Oct 13 15:12 memory_monitor_summary.json
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc   1560580 Oct 13 15:12 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc    471326 Oct 13 15:12 log.46676269._075050.job.log.tgz.1
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc      7784 Oct 13 15:14 heartbeat.json
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc      8192 Oct 13 15:14 boinc_mmap_file
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc        28 Oct 13 15:14 wrapper_checkpoint.txt
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc        95 Oct 13 15:14 pilot_heartbeat.json
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc      4885 Oct 13 15:14 pilotlog.txt
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc   2031703 Oct 13 15:14 log.46676269._075050.job.log.1
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc       357 Oct 13 15:15 output.list
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc       620 Oct 13 15:15 runtime_log
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc   2519040 Oct 13 15:15 result.tar.gz
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc      8717 Oct 13 15:15 runtime_log.err
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc       657 Oct 13 15:15 e9gNDmNF7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVIjNDmseCJRm.diag
[2025-10-13 15:15:00] -rw-r--r--. 1 boinc boinc     20704 Oct 13 15:15 stderr.txt
[2025-10-13 15:15:00] HITS file was successfully produced:
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc 191172269 Oct 13 15:10 shared/HITS.pool.root.1
[2025-10-13 15:15:00]  *** Contents of shared directory: ***
[2025-10-13 15:15:00] total 405476
[2025-10-13 15:15:00] -rw-r--r--. 2 boinc boinc 220923032 Oct 13 10:57 ATLAS.root_0
[2025-10-13 15:15:00] -rw-r--r--. 2 boinc boinc     15120 Oct 13 10:57 start_atlas.sh
[2025-10-13 15:15:00] -rw-r--r--. 2 boinc boinc    569684 Oct 13 10:57 input.tar.gz
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc 191172269 Oct 13 15:10 HITS.pool.root.1
[2025-10-13 15:15:00] -rw-------. 1 boinc boinc   2519040 Oct 13 15:15 result.tar.gz
15:15:02 (21907): run_atlas exited; CPU time 54260.630053
15:15:02 (21907): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN