Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:57:32 (255072): wrapper (7.7.26015): starting
15:57:32 (255072): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 15:57:32] Arguments: --nthreads 4
[2025-10-14 15:57:32] Threads: 4
[2025-10-14 15:57:32] Checking for CVMFS
[2025-10-14 15:57:32] No cvmfs_config command found, will try listing directly
[2025-10-14 15:57:32] CVMFS is ok
[2025-10-14 15:57:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 15:57:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 15:57:32] Further information can be found at the LHC@home message board.
[2025-10-14 15:57:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 15:57:32] Checking for apptainer binary...
[2025-10-14 15:57:32] which: no apptainer in ((null))
[2025-10-14 15:57:32] apptainer is not installed, using version from CVMFS
[2025-10-14 15:57:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 15:57:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-14 15:57:33] apptainer works
[2025-10-14 15:57:33] Set ATHENA_PROC_NUMBER=4
[2025-10-14 15:57:33] Set ATHENA_CORE_NUMBER=4
[2025-10-14 15:57:33] Starting ATLAS job with PandaID=6840181952
[2025-10-14 15:57:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 19:01:21]  *** The last 200 lines of the pilot log: ***
[2025-10-14 19:01:21] 2025-10-14 16:42:33,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 19:01:21] 2025-10-14 16:42:33,893 | INFO     | fitting pss+swap vs Time
[2025-10-14 19:01:21] 2025-10-14 16:42:33,893 | INFO     | sum of square deviations: 1318277740.5
[2025-10-14 19:01:21] 2025-10-14 16:42:33,894 | INFO     | sum of deviations: 14765471479.499992
[2025-10-14 19:01:21] 2025-10-14 16:42:33,895 | INFO     | mean x: 1760455213.5
[2025-10-14 19:01:21] 2025-10-14 16:42:33,895 | INFO     | mean y: 2286299.203703704
[2025-10-14 19:01:21] 2025-10-14 16:42:33,895 | INFO     | -- intersect: -19715828061.137585
[2025-10-14 19:01:21] 2025-10-14 16:42:33,895 | INFO     | intersect: -19715828061.137585
[2025-10-14 19:01:21] 2025-10-14 16:42:33,895 | INFO     | chi2: 1.9817291697293253
[2025-10-14 19:01:21] 2025-10-14 16:42:33,895 | INFO     | sum of square deviations: 1199940638.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,896 | INFO     | sum of deviations: 23278181268.999996
[2025-10-14 19:01:21] 2025-10-14 16:42:33,896 | INFO     | mean x: 1760455061.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,897 | INFO     | mean y: 2296972.3375796177
[2025-10-14 19:01:21] 2025-10-14 16:42:33,897 | INFO     | -- intersect: -34149552484.30733
[2025-10-14 19:01:21] 2025-10-14 16:42:33,897 | INFO     | intersect: -34149552484.30733
[2025-10-14 19:01:21] 2025-10-14 16:42:33,897 | INFO     | chi2: 1.3155386035680647
[2025-10-14 19:01:21] 2025-10-14 16:42:33,897 | INFO     | current chi2=1.3155386035680647 (change=33.61663018021036 %)
[2025-10-14 19:01:21] 2025-10-14 16:42:33,897 | INFO     | sum of square deviations: 1088905998.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,898 | INFO     | sum of deviations: 22440066431.5
[2025-10-14 19:01:21] 2025-10-14 16:42:33,898 | INFO     | mean x: 1760454908.5
[2025-10-14 19:01:21] 2025-10-14 16:42:33,898 | INFO     | mean y: 2295820.835526316
[2025-10-14 19:01:21] 2025-10-14 16:42:33,898 | INFO     | -- intersect: -36276983721.162415
[2025-10-14 19:01:21] 2025-10-14 16:42:33,899 | INFO     | intersect: -36276983721.162415
[2025-10-14 19:01:21] 2025-10-14 16:42:33,899 | INFO     | chi2: 1.316292226653775
[2025-10-14 19:01:21] 2025-10-14 16:42:33,899 | INFO     | current chi2=1.316292226653775 (change=-0.05728627678932058 %)
[2025-10-14 19:01:21] 2025-10-14 16:42:33,899 | INFO     | right removable region: 151
[2025-10-14 19:01:21] 2025-10-14 16:42:33,899 | INFO     | sum of square deviations: 1199940638.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,900 | INFO     | sum of deviations: -5045867784.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,900 | INFO     | mean x: 1760455366.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,900 | INFO     | mean y: 2311407.770700637
[2025-10-14 19:01:21] 2025-10-14 16:42:33,900 | INFO     | -- intersect: 7405198463.312967
[2025-10-14 19:01:21] 2025-10-14 16:42:33,900 | INFO     | intersect: 7405198463.312967
[2025-10-14 19:01:21] 2025-10-14 16:42:33,901 | INFO     | chi2: 0.6861967509299849
[2025-10-14 19:01:21] 2025-10-14 16:42:33,901 | INFO     | current chi2=0.6861967509299849 (change=65.37383808990866 %)
[2025-10-14 19:01:21] 2025-10-14 16:42:33,901 | INFO     | sum of square deviations: 1088905998.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,902 | INFO     | sum of deviations: -5494140527.5
[2025-10-14 19:01:21] 2025-10-14 16:42:33,902 | INFO     | mean x: 1760455518.5
[2025-10-14 19:01:21] 2025-10-14 16:42:33,902 | INFO     | mean y: 2312031.4802631577
[2025-10-14 19:01:21] 2025-10-14 16:42:33,902 | INFO     | -- intersect: 8884795945.44239
[2025-10-14 19:01:21] 2025-10-14 16:42:33,902 | INFO     | intersect: 8884795945.44239
[2025-10-14 19:01:21] 2025-10-14 16:42:33,903 | INFO     | chi2: 0.6855763568549968
[2025-10-14 19:01:21] 2025-10-14 16:42:33,903 | INFO     | current chi2=0.6855763568549968 (change=0.0904105235338459 %)
[2025-10-14 19:01:21] 2025-10-14 16:42:33,903 | INFO     | left removable region: 20
[2025-10-14 19:01:21] 2025-10-14 16:42:33,903 | INFO     | sum of square deviations: 697054930.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | sum of deviations: 2075556659.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | mean x: 1760455488.0
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | mean y: 2325419.4961832063
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | -- intersect: -5239621740.954277
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | intersect: -5239621740.954277
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | chi2: 0.00026064719205555145
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | -- intersect: -5239621740.954277
[2025-10-14 19:01:21] 2025-10-14 16:42:33,904 | INFO     | current memory leak: 2.98 B/s (using 131 data points, chi2=0.00)
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | could have reported an average CPU frequency of 2704 MHz (9 samples)
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | ..............................
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . Timing measurements:
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . get job = 0 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . initial setup = 1 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . payload setup = 9 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . stage-in = 0 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . payload execution = 9842 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,905 | INFO     | . stage-out = 0 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,906 | INFO     | . log creation = 0 s
[2025-10-14 19:01:21] 2025-10-14 16:42:33,906 | INFO     | ..............................
[2025-10-14 19:01:21] 2025-10-14 16:42:34,005 | INFO     | 
[2025-10-14 19:01:21] 2025-10-14 16:42:34,005 | INFO     | job summary report
[2025-10-14 19:01:21] 2025-10-14 16:42:34,005 | INFO     | --------------------------------------------------
[2025-10-14 19:01:21] 2025-10-14 16:42:34,005 | INFO     | PanDA job id: 6840181952
[2025-10-14 19:01:21] 2025-10-14 16:42:34,005 | INFO     | task id: 46676269
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | errors: (none)
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | pilot state: finished 
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | transexitcode: 0
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | exeerrorcode: 0
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | exeerrordiag: 
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | exitcode: 0
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | exitmsg: OK
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | cpuconsumptiontime: 37599 s
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | nevents: 400
[2025-10-14 19:01:21] 2025-10-14 16:42:34,006 | INFO     | neventsw: 0
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | pid: 309681
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | pgrp: 309681
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | corecount: 4
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | event service: False
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | sizes: {0: 2348704, 1: 2348959, 8: 2349221, 12: 2349249, 9855: 2378217, 9856: 2387237, 9859: 2387421, 9867: 2387679}
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | --------------------------------------------------
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | 
[2025-10-14 19:01:21] 2025-10-14 16:42:34,007 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-10-14 19:01:21] 2025-10-14 16:42:34,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | job 6840181952 has completed (purged errors)
[2025-10-14 19:01:21] 2025-10-14 16:42:34,043 | INFO     | overall cleanup function is called
[2025-10-14 19:01:21] 2025-10-14 16:42:35,049 | INFO     | --- collectZombieJob: --- 10, [309681]
[2025-10-14 19:01:21] 2025-10-14 16:42:35,049 | INFO     | zombie collector waiting for pid 309681
[2025-10-14 19:01:21] 2025-10-14 16:42:35,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 19:01:21] 2025-10-14 16:42:35,049 | INFO     | collected zombie processes
[2025-10-14 19:01:21] 2025-10-14 16:42:35,049 | INFO     | will attempt to kill all subprocesses of pid=309681
[2025-10-14 19:01:21] 2025-10-14 16:42:35,792 | INFO     | process IDs to be killed: [309681] (in reverse order)
[2025-10-14 19:01:21] 2025-10-14 16:42:36,045 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 19:01:21] 2025-10-14 16:42:36,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 19:01:21] 2025-10-14 16:42:36,077 | INFO     | did not find any defunct processes belonging to 309681
[2025-10-14 19:01:21] 2025-10-14 16:42:36,104 | INFO     | did not find any defunct processes belonging to 309681
[2025-10-14 19:01:21] 2025-10-14 16:42:36,105 | INFO     | ready for new job
[2025-10-14 19:01:21] 2025-10-14 16:42:36,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 19:01:21] 2025-10-14 16:42:36,107 | INFO     | ***************************************
[2025-10-14 19:01:21] 2025-10-14 16:42:36,107 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 19:01:21] 2025-10-14 16:42:36,107 | INFO     | ***************************************
[2025-10-14 19:01:21] 2025-10-14 16:42:36,107 | INFO     | 
[2025-10-14 19:01:21] 2025-10-14 16:42:36,116 | INFO     | architecture information:
[2025-10-14 19:01:21] 2025-10-14 16:42:36,116 | INFO     | executing command: cat /etc/os-release
[2025-10-14 19:01:21] 2025-10-14 16:42:36,136 | INFO     | cat /etc/os-release:
[2025-10-14 19:01:21] NAME="CentOS Linux"
[2025-10-14 19:01:21] VERSION="7 (Core)"
[2025-10-14 19:01:21] ID="centos"
[2025-10-14 19:01:21] ID_LIKE="rhel fedora"
[2025-10-14 19:01:21] VERSION_ID="7"
[2025-10-14 19:01:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 19:01:21] ANSI_COLOR="0;31"
[2025-10-14 19:01:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 19:01:21] HOME_URL="https://www.centos.org/"
[2025-10-14 19:01:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 19:01:21] 
[2025-10-14 19:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 19:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 19:01:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 19:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 19:01:21] 
[2025-10-14 19:01:21] 2025-10-14 16:42:36,137 | INFO     | ***************************************
[2025-10-14 19:01:21] 2025-10-14 16:42:36,640 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-10-14 19:01:21] 2025-10-14 16:42:36,664 | INFO     | sufficient remaining disk space (3358330978304 B)
[2025-10-14 19:01:21] 2025-10-14 16:42:36,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 19:01:21] 2025-10-14 16:42:36,665 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 19:01:21] 2025-10-14 16:42:36,665 | INFO     | update_server=False
[2025-10-14 19:01:21] 2025-10-14 16:42:36,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 19:01:21] 2025-10-14 16:42:36,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 19:01:21] 2025-10-14 16:42:36,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 19:01:21] 2025-10-14 16:42:37,166 | INFO     | all data control threads have been joined
[2025-10-14 19:01:21] 2025-10-14 16:42:37,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 19:01:21] 2025-10-14 16:42:37,287 | INFO     | aborting loop
[2025-10-14 19:01:21] 2025-10-14 16:42:37,670 | INFO     | [job] retrieve thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:37,789 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:37,844 | INFO     | all job control threads have been joined
[2025-10-14 19:01:21] 2025-10-14 16:42:37,868 | INFO     | all payload control threads have been joined
[2025-10-14 19:01:21] 2025-10-14 16:42:37,983 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,172 | INFO     | [data] control thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,292 | INFO     | [job] job monitor thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,485 | INFO     | [data] copytool_in thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,609 | INFO     | [payload] failed_post thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,672 | INFO     | [data] copytool_out thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,692 | INFO     | [job] validate thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,849 | INFO     | [job] control thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:38,873 | INFO     | [payload] control thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:39,013 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:39,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 19:01:21] 2025-10-14 16:42:39,085 | INFO     | [payload] validate_post thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:40,021 | INFO     | [job] queue monitor thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:40,670 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:42:45,406 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-14 19:01:21] 2025-10-14 16:42:47,546 | INFO     | job.realtimelogging is not enabled
[2025-10-14 19:01:21] 2025-10-14 16:42:48,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 19:01:21] 2025-10-14 16:43:03,707 | INFO     | [monitor] cgroup control has ended
[2025-10-14 19:01:21] 2025-10-14 16:43:03,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22853072426816)>', '<ExcThread(monitor, started 22852830979840)>']
[2025-10-14 19:01:21] 2025-10-14 16:43:07,041 | INFO     | PID=270795 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 19:01:21] 2025-10-14 16:43:07,042 | INFO     | .. there are 10 such processes running
[2025-10-14 19:01:21] 2025-10-14 16:43:07,043 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 19:01:21] 2025-10-14 16:43:07,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 19:01:21] 2025-10-14 16:43:07,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 19:01:21] 2025-10-14 16:43:07,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 19:01:21] 2025-10-14 16:43:07,043 | INFO     | [monitor] control thread has ended
[2025-10-14 19:01:21] 2025-10-14 16:43:08,821 | INFO     | all workflow threads have been joined
[2025-10-14 19:01:21] 2025-10-14 16:43:08,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 19:01:21] 2025-10-14 16:43:08,822 | INFO     | traces error code: 0
[2025-10-14 19:01:21] 2025-10-14 16:43:08,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 19:01:21] 2025-10-14 16:43:09,006 [wrapper] ==== pilot stdout END ====
[2025-10-14 19:01:21] 2025-10-14 16:43:09,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 19:01:21] 2025-10-14 16:43:09,014 [wrapper] pilotpid: 270795
[2025-10-14 19:01:21] 2025-10-14 16:43:09,018 [wrapper] Pilot exit status: 0
[2025-10-14 19:01:21] 2025-10-14 16:43:09,031 [wrapper] pandaids: 6840181952
[2025-10-14 19:01:21] 2025-10-14 16:43:09,198 [wrapper] cleanup supervisor_pilot  732026 270797
[2025-10-14 19:01:21] 2025-10-14 16:43:09,202 [wrapper] Test setup, not cleaning
[2025-10-14 19:01:21] 2025-10-14 16:43:09,205 [wrapper] apfmon messages muted
[2025-10-14 19:01:21] 2025-10-14 16:43:09,209 [wrapper] ==== wrapper stdout END ====
[2025-10-14 19:01:21] 2025-10-14 16:43:09,212 [wrapper] ==== wrapper stderr END ====
[2025-10-14 19:01:21]  *** Error codes and diagnostics ***
[2025-10-14 19:01:21]     "exeErrorCode": 0,
[2025-10-14 19:01:21]     "exeErrorDiag": "",
[2025-10-14 19:01:21]     "pilotErrorCode": 0,
[2025-10-14 19:01:21]     "pilotErrorDiag": "",
[2025-10-14 19:01:21]  *** Listing of results directory ***
[2025-10-14 19:01:21] total 414448
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:31 queuedata.json
[2025-10-14 19:01:21] -rwx------ 1 boinc boinc     36292 Oct 12 16:32 runpilot2-wrapper.sh
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc       100 Oct 14 15:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 19:01:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 15:57 run_atlas
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc       105 Oct 14 15:57 job.xml
[2025-10-14 19:01:21] -rw-r--r-- 2 boinc boinc 220185163 Oct 14 15:57 EVNT.46676267._004244.pool.root.1
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc      6686 Oct 14 15:57 init_data.xml
[2025-10-14 19:01:21] drwxrwx--x 2 boinc boinc      4096 Oct 14 15:57 shared
[2025-10-14 19:01:21] -rw-r--r-- 2 boinc boinc    569681 Oct 14 15:57 input.tar.gz
[2025-10-14 19:01:21] -rw-r--r-- 2 boinc boinc     15120 Oct 14 15:57 start_atlas.sh
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc         0 Oct 14 15:57 boinc_lockfile
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc      2549 Oct 14 15:57 pandaJob.out
[2025-10-14 19:01:21] -rw------- 1 boinc boinc    973969 Oct 14 15:57 agis_schedconf.cvmfs.json
[2025-10-14 19:01:21] -rw------- 1 boinc boinc   1560740 Oct 14 15:57 agis_ddmendpoints.agis.ALL.json
[2025-10-14 19:01:21] drwx------ 5 boinc boinc      4096 Oct 14 15:57 pilot3
[2025-10-14 19:01:21] -rw------- 1 boinc boinc 196876539 Oct 14 18:41 HITS.46676269._080817.pool.root.1
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc       529 Oct 14 18:42 boinc_task_state.xml
[2025-10-14 19:01:21] -rw------- 1 boinc boinc      1035 Oct 14 18:42 memory_monitor_summary.json
[2025-10-14 19:01:21] -rw------- 1 boinc boinc        95 Oct 14 18:42 pilot_heartbeat.json
[2025-10-14 19:01:21] -rw------- 1 boinc boinc    333088 Oct 14 18:42 log.46676269._080817.job.log.tgz.1
[2025-10-14 19:01:21] -rw------- 1 boinc boinc      7772 Oct 14 18:42 heartbeat.json
[2025-10-14 19:01:21] -rw------- 1 boinc boinc      4906 Oct 14 18:43 pilotlog.txt
[2025-10-14 19:01:21] -rw------- 1 boinc boinc   1382844 Oct 14 18:43 log.46676269._080817.job.log.1
[2025-10-14 19:01:21] -rw------- 1 boinc boinc       357 Oct 14 18:43 output.list
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc       620 Oct 14 18:43 runtime_log
[2025-10-14 19:01:21] -rw------- 1 boinc boinc   1730560 Oct 14 18:43 result.tar.gz
[2025-10-14 19:01:21] -rw------- 1 boinc boinc       663 Oct 14 18:43 y4pKDmnICS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmM7TMDmpXfmhm.diag
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc      9069 Oct 14 18:43 runtime_log.err
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc      8192 Oct 14 19:01 boinc_mmap_file
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc        26 Oct 14 19:01 wrapper_checkpoint.txt
[2025-10-14 19:01:21] -rw-r--r-- 1 boinc boinc     20649 Oct 14 19:01 stderr.txt
[2025-10-14 19:01:21] HITS file was successfully produced:
[2025-10-14 19:01:21] -rw------- 1 boinc boinc 196876539 Oct 14 18:41 shared/HITS.pool.root.1
[2025-10-14 19:01:21]  *** Contents of shared directory: ***
[2025-10-14 19:01:21] total 409568
[2025-10-14 19:01:21] -rw-r--r-- 2 boinc boinc 220185163 Oct 14 15:57 ATLAS.root_0
[2025-10-14 19:01:21] -rw-r--r-- 2 boinc boinc    569681 Oct 14 15:57 input.tar.gz
[2025-10-14 19:01:21] -rw-r--r-- 2 boinc boinc     15120 Oct 14 15:57 start_atlas.sh
[2025-10-14 19:01:21] -rw------- 1 boinc boinc 196876539 Oct 14 18:41 HITS.pool.root.1
[2025-10-14 19:01:21] -rw------- 1 boinc boinc   1730560 Oct 14 18:43 result.tar.gz
19:01:23 (255072): run_atlas exited; CPU time 38219.526392
19:01:23 (255072): called boinc_finish(0)

</stderr_txt>
]]>

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