Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:41:01 (3886120): wrapper (7.7.26015): starting
03:41:01 (3886120): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 03:41:01] Arguments: --nthreads 4
[2025-10-13 03:41:01] Threads: 4
[2025-10-13 03:41:01] Checking for CVMFS
[2025-10-13 03:41:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:41:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:41:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:41:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:41:01] 2.9.2.0 2032506 5099 105076 151643 1 57 26403521 36864001 0 130560 0 4584273 99.992 172061 881 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:41:01] CVMFS is ok
[2025-10-13 03:41:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:41:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:41:01] Further information can be found at the LHC@home message board.
[2025-10-13 03:41:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:41:01] Checking for apptainer binary...
[2025-10-13 03:41:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:41:01] Running /usr/bin/apptainer --version
[2025-10-13 03:41:01] apptainer version 1.4.1-1.1
[2025-10-13 03:41:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:41:01] madmaxA277
[2025-10-13 03:41:01] apptainer works
[2025-10-13 03:41:01] Set ATHENA_PROC_NUMBER=4
[2025-10-13 03:41:01] Set ATHENA_CORE_NUMBER=4
[2025-10-13 03:41:01] Starting ATLAS job with PandaID=6839317441
[2025-10-13 03:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:49:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:49:24] 2025-10-13 02:48:53,512 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:49:24] 2025-10-13 02:48:53,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:49:24] 2025-10-13 02:48:53,514 | INFO     | did not find any defunct processes belonging to 3896499
[2025-10-13 04:49:24] 2025-10-13 02:48:53,516 | INFO     | did not find any defunct processes belonging to 3896499
[2025-10-13 04:49:24] 2025-10-13 02:48:53,516 | INFO     | ready for new job
[2025-10-13 04:49:24] 2025-10-13 02:48:53,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:49:24] 2025-10-13 02:48:53,517 | INFO     | ***************************************
[2025-10-13 04:49:24] 2025-10-13 02:48:53,517 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:49:24] 2025-10-13 02:48:53,517 | INFO     | ***************************************
[2025-10-13 04:49:24] 2025-10-13 02:48:53,517 | INFO     | 
[2025-10-13 04:49:24] 2025-10-13 02:48:53,517 | INFO     | architecture information:
[2025-10-13 04:49:24] 2025-10-13 02:48:53,518 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:49:24] 2025-10-13 02:48:53,530 | INFO     | cat /etc/os-release:
[2025-10-13 04:49:24] NAME="CentOS Linux"
[2025-10-13 04:49:24] VERSION="7 (Core)"
[2025-10-13 04:49:24] ID="centos"
[2025-10-13 04:49:24] ID_LIKE="rhel fedora"
[2025-10-13 04:49:24] VERSION_ID="7"
[2025-10-13 04:49:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:49:24] ANSI_COLOR="0;31"
[2025-10-13 04:49:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:49:24] HOME_URL="https://www.centos.org/"
[2025-10-13 04:49:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:49:24] 
[2025-10-13 04:49:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:49:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:49:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:49:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:49:24] 
[2025-10-13 04:49:24] 2025-10-13 02:48:53,531 | INFO     | ***************************************
[2025-10-13 04:49:24] 2025-10-13 02:48:54,033 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 04:49:24] 2025-10-13 02:48:54,051 | INFO     | sufficient remaining disk space (333287784448 B)
[2025-10-13 04:49:24] 2025-10-13 02:48:54,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:49:24] 2025-10-13 02:48:54,051 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:49:24] 2025-10-13 02:48:54,051 | INFO     | update_server=False
[2025-10-13 04:49:24] 2025-10-13 02:48:54,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:49:24] 2025-10-13 02:48:54,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:49:24] 2025-10-13 02:48:54,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:49:24] 2025-10-13 02:48:54,603 | INFO     | all payload control threads have been joined
[2025-10-13 04:49:24] 2025-10-13 02:48:54,697 | INFO     | all data control threads have been joined
[2025-10-13 04:49:24] 2025-10-13 02:48:54,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:49:24] 2025-10-13 02:48:54,816 | INFO     | aborting loop
[2025-10-13 04:49:24] 2025-10-13 02:48:55,056 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,056 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,093 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,189 | INFO     | all job control threads have been joined
[2025-10-13 04:49:24] 2025-10-13 02:48:55,258 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,320 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:49:24] 2025-10-13 02:48:55,537 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,609 | INFO     | [payload] control thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,703 | INFO     | [data] control thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,821 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:55,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:56,195 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:56,195 | INFO     | [job] control thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:56,464 | INFO     | [job] validate thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:56,535 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:57,472 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:48:58,419 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:49:24] 2025-10-13 02:49:13,954 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:49:24] 2025-10-13 02:49:14,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140349713160000)>', '<ExcThread(monitor, started 140348911245056)>']
[2025-10-13 04:49:24] 2025-10-13 02:49:19,985 | INFO     | all workflow threads have been joined
[2025-10-13 04:49:24] 2025-10-13 02:49:19,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:49:24] 2025-10-13 02:49:19,986 | INFO     | traces error code: 0
[2025-10-13 04:49:24] 2025-10-13 02:49:19,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:49:24] 2025-10-13 02:49:24,708 | INFO     | PID=3889928 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:49:24] 2025-10-13 02:49:24,709 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:49:24] 2025-10-13 02:49:24,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:49:24] 2025-10-13 02:49:24,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:49:24] 2025-10-13 02:49:24,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:49:24] 2025-10-13 02:49:24,709 | INFO     | [monitor] control thread has ended
[2025-10-13 04:49:24] 2025-10-13 02:49:24,786 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:49:24] 2025-10-13 02:49:24,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:49:24] 2025-10-13 02:49:24,793 [wrapper] pilotpid: 3889928
[2025-10-13 04:49:24] 2025-10-13 02:49:24,796 [wrapper] Pilot exit status: 0
[2025-10-13 04:49:24] 2025-10-13 02:49:24,807 [wrapper] pandaids: 6839317441
[2025-10-13 04:49:24] 2025-10-13 02:49:24,828 [wrapper] cleanup supervisor_pilot 3908228 3889929
[2025-10-13 04:49:24] 2025-10-13 02:49:24,832 [wrapper] Test setup, not cleaning
[2025-10-13 04:49:24] 2025-10-13 02:49:24,836 [wrapper] apfmon messages muted
[2025-10-13 04:49:24] 2025-10-13 02:49:24,839 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:49:24] 2025-10-13 02:49:24,843 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:49:24]  *** Error codes and diagnostics ***
[2025-10-13 04:49:24]     "exeErrorCode": 0,
[2025-10-13 04:49:24]     "exeErrorDiag": "",
[2025-10-13 04:49:24]     "pilotErrorCode": 0,
[2025-10-13 04:49:24]     "pilotErrorDiag": "",
[2025-10-13 04:49:24]  *** Listing of results directory ***
[2025-10-13 04:49:24] total 401548
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc      5112 Oct 12 04:47 queuedata.json
[2025-10-13 04:49:24] -rwx------ 1 boinc boinc     36292 Oct 12 04:49 runpilot2-wrapper.sh
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc    557409 Oct 12 04:49 pilot3.tar.gz
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:49:24] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:41 run_atlas
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:41 job.xml
[2025-10-13 04:49:24] -rw-r--r-- 2 boinc boinc 220246473 Oct 13 03:41 EVNT.46676267._003188.pool.root.1
[2025-10-13 04:49:24] -rw-r--r-- 2 boinc boinc    569680 Oct 13 03:41 input.tar.gz
[2025-10-13 04:49:24] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:41 start_atlas.sh
[2025-10-13 04:49:24] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:41 shared
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:41 boinc_setup_complete
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc      6373 Oct 13 03:41 init_data.xml
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:41 boinc_lockfile
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:41 pandaJob.out
[2025-10-13 04:49:24] -rw------- 1 boinc boinc    975595 Oct 13 03:41 agis_schedconf.cvmfs.json
[2025-10-13 04:49:24] -rw------- 1 boinc boinc   1560580 Oct 13 03:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:49:24] drwx------ 5 boinc boinc      4096 Oct 13 03:41 pilot3
[2025-10-13 04:49:24] -rw------- 1 boinc boinc 185289352 Oct 13 04:48 HITS.46676269._069480.pool.root.1
[2025-10-13 04:49:24] -rw------- 1 boinc boinc        95 Oct 13 04:48 pilot_heartbeat.json
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc       529 Oct 13 04:48 boinc_task_state.xml
[2025-10-13 04:49:24] -rw------- 1 boinc boinc      1023 Oct 13 04:48 memory_monitor_summary.json
[2025-10-13 04:49:24] -rw------- 1 boinc boinc    270732 Oct 13 04:48 log.46676269._069480.job.log.tgz.1
[2025-10-13 04:49:24] -rw------- 1 boinc boinc      7776 Oct 13 04:48 heartbeat.json
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc        27 Oct 13 04:49 wrapper_checkpoint.txt
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc      8192 Oct 13 04:49 boinc_mmap_file
[2025-10-13 04:49:24] -rw------- 1 boinc boinc       747 Oct 13 04:49 pilotlog.txt
[2025-10-13 04:49:24] -rw------- 1 boinc boinc    606613 Oct 13 04:49 log.46676269._069480.job.log.1
[2025-10-13 04:49:24] -rw------- 1 boinc boinc       357 Oct 13 04:49 output.list
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc       620 Oct 13 04:49 runtime_log
[2025-10-13 04:49:24] -rw------- 1 boinc boinc    901120 Oct 13 04:49 result.tar.gz
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc      8797 Oct 13 04:49 runtime_log.err
[2025-10-13 04:49:24] -rw------- 1 boinc boinc       662 Oct 13 04:49 hktKDmFK1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3NiNDmkuCB3m.diag
[2025-10-13 04:49:24] -rw-r--r-- 1 boinc boinc      9974 Oct 13 04:49 stderr.txt
[2025-10-13 04:49:24] HITS file was successfully produced:
[2025-10-13 04:49:24] -rw------- 1 boinc boinc 185289352 Oct 13 04:48 shared/HITS.pool.root.1
[2025-10-13 04:49:24]  *** Contents of shared directory: ***
[2025-10-13 04:49:24] total 397496
[2025-10-13 04:49:24] -rw-r--r-- 2 boinc boinc 220246473 Oct 13 03:41 ATLAS.root_0
[2025-10-13 04:49:24] -rw-r--r-- 2 boinc boinc    569680 Oct 13 03:41 input.tar.gz
[2025-10-13 04:49:24] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:41 start_atlas.sh
[2025-10-13 04:49:24] -rw------- 1 boinc boinc 185289352 Oct 13 04:48 HITS.pool.root.1
[2025-10-13 04:49:24] -rw------- 1 boinc boinc    901120 Oct 13 04:49 result.tar.gz
04:49:26 (3886120): run_atlas exited; CPU time 15207.628625
04:49:26 (3886120): called boinc_finish(0)

</stderr_txt>
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