Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:45:26 (1158000): wrapper (7.7.26015): starting
00:45:26 (1158000): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:45:26] Arguments: --nthreads 12
[2025-10-13 00:45:26] Threads: 12
[2025-10-13 00:45:26] Checking for CVMFS
[2025-10-13 00:45:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:45:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:45:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:45:29] 2.13.2.0 8937 25406 276292 151640 1 159 38692316 46080000 52354 130560 0 171766953 99.935 31685198 23166 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-13 00:45:29] CVMFS is ok
[2025-10-13 00:45:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:45:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:45:29] Further information can be found at the LHC@home message board.
[2025-10-13 00:45:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:45:29] Checking for apptainer binary...
[2025-10-13 00:45:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:45:29] Running /usr/bin/apptainer --version
[2025-10-13 00:45:29] apptainer version 1.4.2-1.el9
[2025-10-13 00:45:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:45:29] mff2102.farm.particle.cz
[2025-10-13 00:45:29] apptainer works
[2025-10-13 00:45:30] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:45:30] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:45:30] Starting ATLAS job with PandaID=6839590828
[2025-10-13 00:45:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:25:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:25:35] 2025-10-13 00:22:34,247 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15546 B
[2025-10-13 02:25:35] 2025-10-13 00:22:34,247 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-13 02:25:35] 2025-10-13 00:22:34,639 | INFO     | time since job start (5724s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:36,646 | INFO     | time since job start (5726s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:38,653 | INFO     | time since job start (5728s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:40,842 | INFO     | PID=1165502 has CPU usage=18.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 02:25:35] 2025-10-13 00:22:40,842 | INFO     | .. there are 85 such processes running
[2025-10-13 02:25:35] 2025-10-13 00:22:41,849 | INFO     | time since job start (5731s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:43,859 | INFO     | time since job start (5733s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:45,866 | INFO     | time since job start (5735s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:47,876 | INFO     | time since job start (5737s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:49,884 | INFO     | time since job start (5739s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:51,893 | INFO     | time since job start (5741s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:53,901 | INFO     | time since job start (5743s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:55,923 | INFO     | time since job start (5745s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:57,930 | INFO     | time since job start (5747s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:22:59,938 | INFO     | time since job start (5749s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:01,945 | INFO     | time since job start (5751s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:04,365 | INFO     | PID=1165502 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:25:35] 2025-10-13 00:23:04,365 | INFO     | .. there are 85 such processes running
[2025-10-13 02:25:35] 2025-10-13 00:23:05,366 | INFO     | time since job start (5755s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:07,372 | INFO     | time since job start (5757s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:09,379 | INFO     | time since job start (5759s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:11,386 | INFO     | time since job start (5761s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:13,392 | INFO     | time since job start (5763s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:15,399 | INFO     | time since job start (5765s) is within the limit (172800.0s)
[2025-10-13 02:25:35] 2025-10-13 00:23:15,958 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 02:25:35] 2025-10-13 00:23:16,006 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2854.6543125000003
[2025-10-13 02:25:35] 2025-10-13 00:23:16,042 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6839590828/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,043 | INFO     | extracted standard info from prmon json
[2025-10-13 02:25:35] 2025-10-13 00:23:16,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:25:35] 2025-10-13 00:23:16,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:25:35] 2025-10-13 00:23:16,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:25:35] 2025-10-13 00:23:16,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:25:35] 2025-10-13 00:23:16,049 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:25:35] 2025-10-13 00:23:16,050 | INFO     | sum of square deviations: 190429567.6941181
[2025-10-13 02:25:35] 2025-10-13 00:23:16,050 | INFO     | sum of deviations: -3450326040.8000007
[2025-10-13 02:25:35] 2025-10-13 00:23:16,050 | INFO     | mean x: 1760312212.164706
[2025-10-13 02:25:35] 2025-10-13 00:23:16,050 | INFO     | mean y: 2718291.2
[2025-10-13 02:25:35] 2025-10-13 00:23:16,050 | INFO     | -- intersect: 31897193183.492374
[2025-10-13 02:25:35] 2025-10-13 00:23:16,050 | INFO     | intersect: 31897193183.492374
[2025-10-13 02:25:35] 2025-10-13 00:23:16,051 | INFO     | chi2: 0.01113096448858948
[2025-10-13 02:25:35] 2025-10-13 00:23:16,051 | INFO     | -- intersect: 31897193183.492374
[2025-10-13 02:25:35] 2025-10-13 00:23:16,051 | INFO     | current memory leak: -18.12 B/s (using 85 data points, chi2=0.01)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,051 | INFO     | could have reported an average CPU frequency of 2878 MHz (7 samples)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | ..............................
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . Timing measurements:
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . get job = 0 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . initial setup = 5 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . payload setup = 22 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . stage-in = 0 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . payload execution = 5613 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . stage-out = 2 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | . log creation = 0 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,052 | INFO     | ..............................
[2025-10-13 02:25:35] 2025-10-13 00:23:16,110 | INFO     | sufficient remaining disk space (1668382982144 B)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,110 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,111 | INFO     | size of work directory /scratch/.boinc/slots/0/PanDA_Pilot-6839590828: 4142169 B (within 2537553920 B limit)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,111 | INFO     | pfn file=/scratch/.boinc/slots/0/PanDA_Pilot-6839590828/HITS.46676269._072396.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,111 | INFO     | total size of present files: 0 B (workdir size: 4142169 B)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,112 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/0/PanDA_Pilot-6839590828/HITS.46676269._072396.pool.root.1 since it does not exist
[2025-10-13 02:25:35] 2025-10-13 00:23:16,209 | INFO     | 
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | job summary report
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | --------------------------------------------------
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | PanDA job id: 6839590828
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | task id: 46676269
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | errors: (none)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | pilot state: finished 
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | transexitcode: 0
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | exeerrorcode: 0
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | exeerrordiag: 
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | exitcode: 0
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | exitmsg: OK
[2025-10-13 02:25:35] 2025-10-13 00:23:16,210 | INFO     | cpuconsumptiontime: 37159 s
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | nevents: 400
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | neventsw: 0
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | pid: 1189198
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | pgrp: 1189198
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | corecount: 12
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | event service: False
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 23: 2348914, 33: 2348942, 42: 2349260, 44: 2349444, 5639: 2376101, 5640: 2376100, 5642: 2385212, 5688: 2385378}
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | --------------------------------------------------
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | 
[2025-10-13 02:25:35] 2025-10-13 00:23:16,211 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-13 02:25:35] 2025-10-13 00:23:16,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | job 6839590828 has completed (purged errors)
[2025-10-13 02:25:35] 2025-10-13 00:23:16,379 | INFO     | overall cleanup function is called
[2025-10-13 02:25:35] 2025-10-13 00:23:17,270 | INFO     | number of running child processes to parent process 1189198: 1
[2025-10-13 02:25:35] 2025-10-13 00:23:17,270 | INFO     | maximum number of monitored processes: 7
[2025-10-13 02:25:35] 2025-10-13 00:23:17,270 | INFO     | aborting job monitoring since job object (job id=6839590828) has expired
[2025-10-13 02:25:35] 2025-10-13 00:23:17,393 | INFO     | --- collectZombieJob: --- 10, [1189198]
[2025-10-13 02:25:35] 2025-10-13 00:23:17,393 | INFO     | zombie collector waiting for pid 1189198
[2025-10-13 02:25:35] 2025-10-13 00:23:17,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:25:35] 2025-10-13 00:23:17,393 | INFO     | collected zombie processes
[2025-10-13 02:25:35] 2025-10-13 00:23:17,393 | INFO     | will attempt to kill all subprocesses of pid=1189198
[2025-10-13 02:25:35] 2025-10-13 00:23:18,547 | INFO     | process IDs to be killed: [1189198] (in reverse order)
[2025-10-13 02:25:35] 2025-10-13 00:23:18,959 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:25:35] 2025-10-13 00:23:18,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:25:35] 2025-10-13 00:23:19,015 | INFO     | did not find any defunct processes belonging to 1189198
[2025-10-13 02:25:35] 2025-10-13 00:23:19,078 | INFO     | did not find any defunct processes belonging to 1189198
[2025-10-13 02:25:35] 2025-10-13 00:23:19,078 | INFO     | ready for new job
[2025-10-13 02:25:35] 2025-10-13 00:23:19,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:25:35] 2025-10-13 00:23:19,084 | INFO     | ***************************************
[2025-10-13 02:25:35] 2025-10-13 00:23:19,084 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:25:35] 2025-10-13 00:23:19,085 | INFO     | ***************************************
[2025-10-13 02:25:35] 2025-10-13 00:23:19,085 | INFO     | 
[2025-10-13 02:25:35] 2025-10-13 00:23:19,095 | INFO     | architecture information:
[2025-10-13 02:25:35] 2025-10-13 00:23:19,099 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:25:35] 2025-10-13 00:23:19,199 | INFO     | cat /etc/os-release:
[2025-10-13 02:25:35] NAME="CentOS Linux"
[2025-10-13 02:25:35] VERSION="7 (Core)"
[2025-10-13 02:25:35] ID="centos"
[2025-10-13 02:25:35] ID_LIKE="rhel fedora"
[2025-10-13 02:25:35] VERSION_ID="7"
[2025-10-13 02:25:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:25:35] ANSI_COLOR="0;31"
[2025-10-13 02:25:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:25:35] HOME_URL="https://www.centos.org/"
[2025-10-13 02:25:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:25:35] 
[2025-10-13 02:25:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:25:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:25:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:25:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:25:35] 
[2025-10-13 02:25:35] 2025-10-13 00:23:19,199 | INFO     | ***************************************
[2025-10-13 02:25:35] 2025-10-13 00:23:19,703 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-13 02:25:35] 2025-10-13 00:23:19,861 | INFO     | sufficient remaining disk space (1668388225024 B)
[2025-10-13 02:25:35] 2025-10-13 00:23:19,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:25:35] 2025-10-13 00:23:19,862 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:25:35] 2025-10-13 00:23:19,862 | INFO     | update_server=False
[2025-10-13 02:25:35] 2025-10-13 00:23:19,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:25:35] 2025-10-13 00:23:20,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:25:35] 2025-10-13 00:23:20,748 | INFO     | all data control threads have been joined
[2025-10-13 02:25:35] 2025-10-13 00:23:20,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:25:35] 2025-10-13 00:23:20,792 | INFO     | aborting loop
[2025-10-13 02:25:35] 2025-10-13 00:23:20,868 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,015 | INFO     | all payload control threads have been joined
[2025-10-13 02:25:35] 2025-10-13 00:23:21,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:25:35] 2025-10-13 00:23:21,303 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,306 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:25:35] 2025-10-13 00:23:21,328 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,391 | INFO     | [job] validate thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,527 | INFO     | all job control threads have been joined
[2025-10-13 02:25:35] 2025-10-13 00:23:21,703 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,761 | INFO     | [data] control thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,798 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:21,895 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:22,021 | INFO     | [payload] control thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:22,230 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:22,230 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:22,533 | INFO     | [job] control thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:22,692 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:25,327 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:30,265 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:25:35] 2025-10-13 00:23:31,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:25:35] 2025-10-13 00:23:49,729 | INFO     | PID=1165502 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:25:35] 2025-10-13 00:23:49,729 | INFO     | .. there are 85 such processes running
[2025-10-13 02:25:35] 2025-10-13 00:23:49,730 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:25:35] 2025-10-13 00:23:49,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:25:35] 2025-10-13 00:23:49,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:25:35] 2025-10-13 00:24:19,711 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:25:35] 2025-10-13 00:24:21,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244882200384)>', '<ExcThread(monitor, started 140244020090624)>']
[2025-10-13 02:25:35] 2025-10-13 00:24:21,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:25:35] 2025-10-13 00:24:21,947 | INFO     | [monitor] control thread has ended
[2025-10-13 02:25:35] 2025-10-13 00:24:26,345 | INFO     | all workflow threads have been joined
[2025-10-13 02:25:35] 2025-10-13 00:24:26,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:25:35] 2025-10-13 00:24:26,356 | INFO     | traces error code: 0
[2025-10-13 02:25:35] 2025-10-13 00:24:26,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:25:35] 2025-10-13 00:24:26,741 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:25:35] 2025-10-13 00:24:26,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:25:35] 2025-10-13 00:24:26,827 [wrapper] pilotpid: 1165502
[2025-10-13 02:25:35] 2025-10-13 00:24:26,861 [wrapper] Pilot exit status: 0
[2025-10-13 02:25:35] 2025-10-13 00:24:27,023 [wrapper] pandaids: 6839590828
[2025-10-13 02:25:35] 2025-10-13 00:24:27,518 [wrapper] cleanup supervisor_pilot 1484269 1165503
[2025-10-13 02:25:35] 2025-10-13 00:24:27,545 [wrapper] Test setup, not cleaning
[2025-10-13 02:25:35] 2025-10-13 00:24:27,575 [wrapper] apfmon messages muted
[2025-10-13 02:25:35] 2025-10-13 00:24:27,613 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:25:35] 2025-10-13 00:24:27,652 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:25:35]  *** Error codes and diagnostics ***
[2025-10-13 02:25:35]     "exeErrorCode": 0,
[2025-10-13 02:25:35]     "exeErrorDiag": "",
[2025-10-13 02:25:35]     "pilotErrorCode": 0,
[2025-10-13 02:25:35]     "pilotErrorDiag": "",
[2025-10-13 02:25:35]  *** Listing of results directory ***
[2025-10-13 02:25:35] total 414072
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-13 02:25:35] -rwx------ 1 boinc boinc     36292 Oct 12 08:22 runpilot2-wrapper.sh
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:22 queuedata.json
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:25:35] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:45 run_atlas
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:45 job.xml
[2025-10-13 02:25:35] -rw-r--r-- 2 boinc boinc 220843442 Oct 13 00:45 EVNT.46676267._004345.pool.root.1
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc      6665 Oct 13 00:45 init_data.xml
[2025-10-13 02:25:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:45 start_atlas.sh
[2025-10-13 02:25:35] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:45 shared
[2025-10-13 02:25:35] -rw-r--r-- 2 boinc boinc    569681 Oct 13 00:45 input.tar.gz
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:45 boinc_lockfile
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:45 pandaJob.out
[2025-10-13 02:25:35] -rw------- 1 boinc boinc    975603 Oct 13 00:47 agis_schedconf.cvmfs.json
[2025-10-13 02:25:35] -rw------- 1 boinc boinc   1560580 Oct 13 00:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:25:35] drwx------ 5 boinc boinc      4096 Oct 13 00:47 pilot3
[2025-10-13 02:25:35] -rw------- 1 boinc boinc 196928657 Oct 13 02:21 HITS.46676269._072396.pool.root.1
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc       528 Oct 13 02:21 boinc_task_state.xml
[2025-10-13 02:25:35] -rw------- 1 boinc boinc      1024 Oct 13 02:22 memory_monitor_summary.json
[2025-10-13 02:25:35] -rw------- 1 boinc boinc    386453 Oct 13 02:22 log.46676269._072396.job.log.tgz.1
[2025-10-13 02:25:35] -rw------- 1 boinc boinc      7776 Oct 13 02:23 heartbeat.json
[2025-10-13 02:25:35] -rw------- 1 boinc boinc        95 Oct 13 02:23 pilot_heartbeat.json
[2025-10-13 02:25:35] -rw------- 1 boinc boinc      4899 Oct 13 02:24 pilotlog.txt
[2025-10-13 02:25:35] -rw------- 1 boinc boinc    777911 Oct 13 02:24 log.46676269._072396.job.log.1
[2025-10-13 02:25:35] -rw------- 1 boinc boinc       357 Oct 13 02:24 output.list
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:24 runtime_log
[2025-10-13 02:25:35] -rw------- 1 boinc boinc   1187840 Oct 13 02:24 result.tar.gz
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc      8764 Oct 13 02:24 runtime_log.err
[2025-10-13 02:25:35] -rw------- 1 boinc boinc       663 Oct 13 02:24 ji0MDm8d4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbLTMDmwHhNWo.diag
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc        26 Oct 13 02:25 wrapper_checkpoint.txt
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc      8192 Oct 13 02:25 boinc_mmap_file
[2025-10-13 02:25:35] -rw-r--r-- 1 boinc boinc     22490 Oct 13 02:25 stderr.txt
[2025-10-13 02:25:35] HITS file was successfully produced:
[2025-10-13 02:25:35] -rw------- 1 boinc boinc 196928657 Oct 13 02:21 shared/HITS.pool.root.1
[2025-10-13 02:25:35]  *** Contents of shared directory: ***
[2025-10-13 02:25:35] total 409728
[2025-10-13 02:25:35] -rw-r--r-- 2 boinc boinc 220843442 Oct 13 00:45 ATLAS.root_0
[2025-10-13 02:25:35] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:45 start_atlas.sh
[2025-10-13 02:25:35] -rw-r--r-- 2 boinc boinc    569681 Oct 13 00:45 input.tar.gz
[2025-10-13 02:25:35] -rw------- 1 boinc boinc 196928657 Oct 13 02:21 HITS.pool.root.1
[2025-10-13 02:25:35] -rw------- 1 boinc boinc   1187840 Oct 13 02:24 result.tar.gz
02:25:37 (1158000): run_atlas exited; CPU time 37433.958221
02:25:37 (1158000): called boinc_finish(0)

</stderr_txt>
]]>

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