Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:48:34 (395045): wrapper (7.7.26015): starting
11:48:34 (395045): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:48:34] Arguments: --nthreads 8
[2025-10-12 11:48:34] Threads: 8
[2025-10-12 11:48:34] Checking for CVMFS
[2025-10-12 11:48:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:48:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:48:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:48:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:48:35] 2.13.2.0 1602499 124009 169716 151625 0 525 23062522 40960000 26565 16776704 0 304510958 99.733 202655357 35264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:48:35] CVMFS is ok
[2025-10-12 11:48:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:48:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:48:35] Further information can be found at the LHC@home message board.
[2025-10-12 11:48:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:48:35] Checking for apptainer binary...
[2025-10-12 11:48:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:48:35] Running /usr/bin/apptainer --version
[2025-10-12 11:48:35] apptainer version 1.4.3-1.el9
[2025-10-12 11:48:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:48:35] c-212-17.aglt2.org
[2025-10-12 11:48:35] apptainer works
[2025-10-12 11:48:35] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:48:35] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:48:35] Starting ATLAS job with PandaID=6840181900
[2025-10-12 11:48:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:21:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:21:51] 2025-10-12 21:20:52,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:21:51] 2025-10-12 21:20:52,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:21:51] 2025-10-12 21:20:52,343 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:21:51] 2025-10-12 21:20:52,343 | INFO     | sum of square deviations: 10644657070.603064
[2025-10-12 17:21:51] 2025-10-12 21:20:52,346 | INFO     | sum of deviations: 55045687911.763084
[2025-10-12 17:21:51] 2025-10-12 21:20:52,346 | INFO     | mean x: 1760294090.2246153
[2025-10-12 17:21:51] 2025-10-12 21:20:52,346 | INFO     | mean y: 2445689.3046153844
[2025-10-12 17:21:51] 2025-10-12 21:20:52,346 | INFO     | -- intersect: -9100393273.07217
[2025-10-12 17:21:51] 2025-10-12 21:20:52,346 | INFO     | intersect: -9100393273.07217
[2025-10-12 17:21:51] 2025-10-12 21:20:52,347 | INFO     | chi2: 3.7170423514194613
[2025-10-12 17:21:51] 2025-10-12 21:20:52,347 | INFO     | sum of square deviations: 10160892299.800076
[2025-10-12 17:21:51] 2025-10-12 21:20:52,349 | INFO     | sum of deviations: 95654387265.50005
[2025-10-12 17:21:51] 2025-10-12 21:20:52,349 | INFO     | mean x: 1760293937.725
[2025-10-12 17:21:51] 2025-10-12 21:20:52,349 | INFO     | mean y: 2458368.6875
[2025-10-12 17:21:51] 2025-10-12 21:20:52,349 | INFO     | -- intersect: -16568904957.697937
[2025-10-12 17:21:51] 2025-10-12 21:20:52,349 | INFO     | intersect: -16568904957.697937
[2025-10-12 17:21:51] 2025-10-12 21:20:52,350 | INFO     | chi2: 2.2263043599355914
[2025-10-12 17:21:51] 2025-10-12 21:20:52,350 | INFO     | current chi2=2.2263043599355914 (change=40.10548846489704 %)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,350 | INFO     | sum of square deviations: 9692031049.542896
[2025-10-12 17:21:51] 2025-10-12 21:20:52,352 | INFO     | sum of deviations: 93819389514.85715
[2025-10-12 17:21:51] 2025-10-12 21:20:52,352 | INFO     | mean x: 1760293785.2285714
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | mean y: 2457771.6825396824
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | -- intersect: -17037282139.667677
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | intersect: -17037282139.667677
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | chi2: 2.226677221913396
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | current chi2=2.226677221913396 (change=-0.016748023518918832 %)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | right removable region: 314
[2025-10-12 17:21:51] 2025-10-12 21:20:52,353 | INFO     | sum of square deviations: 10160867595.346977
[2025-10-12 17:21:51] 2025-10-12 21:20:52,356 | INFO     | sum of deviations: -13579969432.103119
[2025-10-12 17:21:51] 2025-10-12 21:20:52,356 | INFO     | mean x: 1760294242.728125
[2025-10-12 17:21:51] 2025-10-12 21:20:52,356 | INFO     | mean y: 2467240.378125
[2025-10-12 17:21:51] 2025-10-12 21:20:52,360 | INFO     | -- intersect: 2355095279.611889
[2025-10-12 17:21:51] 2025-10-12 21:20:52,360 | INFO     | intersect: 2355095279.611889
[2025-10-12 17:21:51] 2025-10-12 21:20:52,360 | INFO     | chi2: 1.7730026902160054
[2025-10-12 17:21:51] 2025-10-12 21:20:52,360 | INFO     | current chi2=1.7730026902160054 (change=52.30071323941379 %)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,361 | INFO     | sum of square deviations: 9691962120.082586
[2025-10-12 17:21:51] 2025-10-12 21:20:52,363 | INFO     | sum of deviations: -37411572811.90159
[2025-10-12 17:21:51] 2025-10-12 21:20:52,363 | INFO     | mean x: 1760294395.231746
[2025-10-12 17:21:51] 2025-10-12 21:20:52,363 | INFO     | mean y: 2474969.93015873
[2025-10-12 17:21:51] 2025-10-12 21:20:52,363 | INFO     | -- intersect: 6797320133.546375
[2025-10-12 17:21:51] 2025-10-12 21:20:52,363 | INFO     | intersect: 6797320133.546375
[2025-10-12 17:21:51] 2025-10-12 21:20:52,364 | INFO     | chi2: 1.5536158690936062
[2025-10-12 17:21:51] 2025-10-12 21:20:52,364 | INFO     | current chi2=1.5536158690936062 (change=12.373744401689052 %)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,364 | INFO     | left removable region: 20
[2025-10-12 17:21:51] 2025-10-12 21:20:52,364 | INFO     | sum of square deviations: 7879959526.833305
[2025-10-12 17:21:51] 2025-10-12 21:20:52,366 | INFO     | sum of deviations: 3153561075.5000033
[2025-10-12 17:21:51] 2025-10-12 21:20:52,366 | INFO     | mean x: 1760294364.7380953
[2025-10-12 17:21:51] 2025-10-12 21:20:52,366 | INFO     | mean y: 2488272.0714285714
[2025-10-12 17:21:51] 2025-10-12 21:20:52,366 | INFO     | -- intersect: -701981817.0396643
[2025-10-12 17:21:51] 2025-10-12 21:20:52,366 | INFO     | intersect: -701981817.0396643
[2025-10-12 17:21:51] 2025-10-12 21:20:52,367 | INFO     | chi2: 0.02078314079068798
[2025-10-12 17:21:51] 2025-10-12 21:20:52,367 | INFO     | -- intersect: -701981817.0396643
[2025-10-12 17:21:51] 2025-10-12 21:20:52,367 | INFO     | current memory leak: 0.40 B/s (using 294 data points, chi2=0.02)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | could have reported an average CPU frequency of 3144 MHz (14 samples)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | ..............................
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . Timing measurements:
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . get job = 0 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . initial setup = 3 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . payload setup = 14 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . stage-in = 0 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . payload execution = 19828 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . stage-out = 4 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | . log creation = 0 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,368 | INFO     | ..............................
[2025-10-12 17:21:51] 2025-10-12 21:20:52,948 | INFO     | 
[2025-10-12 17:21:51] 2025-10-12 21:20:52,949 | INFO     | job summary report
[2025-10-12 17:21:51] 2025-10-12 21:20:52,949 | INFO     | --------------------------------------------------
[2025-10-12 17:21:51] 2025-10-12 21:20:52,949 | INFO     | PanDA job id: 6840181900
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | task id: 46676269
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | errors: (none)
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | pilot state: finished 
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | transexitcode: 0
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | exeerrorcode: 0
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | exeerrordiag: 
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | exitcode: 0
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | exitmsg: OK
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | cpuconsumptiontime: 36980 s
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | nevents: 400
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | neventsw: 0
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | pid: 419321
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | pgrp: 419321
[2025-10-12 17:21:51] 2025-10-12 21:20:52,950 | INFO     | corecount: 8
[2025-10-12 17:21:51] 2025-10-12 21:20:52,951 | INFO     | event service: False
[2025-10-12 17:21:51] 2025-10-12 21:20:52,951 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 13: 2349175, 23: 2349231, 19846: 2382762, 19851: 2391760, 19853: 2391816, 19867: 2392010}
[2025-10-12 17:21:51] 2025-10-12 21:20:52,951 | INFO     | --------------------------------------------------
[2025-10-12 17:21:51] 2025-10-12 21:20:52,951 | INFO     | 
[2025-10-12 17:21:51] 2025-10-12 21:20:52,951 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:21:51] 2025-10-12 21:20:53,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:21:51] 2025-10-12 21:20:53,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:21:51] 2025-10-12 21:20:53,073 | INFO     | job 6840181900 has completed (purged errors)
[2025-10-12 17:21:51] 2025-10-12 21:20:53,073 | INFO     | overall cleanup function is called
[2025-10-12 17:21:51] 2025-10-12 21:20:54,092 | INFO     | --- collectZombieJob: --- 10, [419321]
[2025-10-12 17:21:51] 2025-10-12 21:20:54,092 | INFO     | zombie collector waiting for pid 419321
[2025-10-12 17:21:51] 2025-10-12 21:20:54,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:21:51] 2025-10-12 21:20:54,094 | INFO     | collected zombie processes
[2025-10-12 17:21:51] 2025-10-12 21:20:54,094 | INFO     | will attempt to kill all subprocesses of pid=419321
[2025-10-12 17:21:51] 2025-10-12 21:20:54,921 | INFO     | process IDs to be killed: [419321] (in reverse order)
[2025-10-12 17:21:51] 2025-10-12 21:20:55,132 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:21:51] 2025-10-12 21:20:55,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:21:51] 2025-10-12 21:20:55,151 | INFO     | did not find any defunct processes belonging to 419321
[2025-10-12 17:21:51] 2025-10-12 21:20:55,213 | INFO     | did not find any defunct processes belonging to 419321
[2025-10-12 17:21:51] 2025-10-12 21:20:55,214 | INFO     | ready for new job
[2025-10-12 17:21:51] 2025-10-12 21:20:55,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:21:51] 2025-10-12 21:20:55,241 | INFO     | ***************************************
[2025-10-12 17:21:51] 2025-10-12 21:20:55,242 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:21:51] 2025-10-12 21:20:55,242 | INFO     | ***************************************
[2025-10-12 17:21:51] 2025-10-12 21:20:55,242 | INFO     | 
[2025-10-12 17:21:51] 2025-10-12 21:20:55,276 | INFO     | architecture information:
[2025-10-12 17:21:51] 2025-10-12 21:20:55,282 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:21:51] 2025-10-12 21:20:55,436 | INFO     | cat /etc/os-release:
[2025-10-12 17:21:51] NAME="CentOS Linux"
[2025-10-12 17:21:51] VERSION="7 (Core)"
[2025-10-12 17:21:51] ID="centos"
[2025-10-12 17:21:51] ID_LIKE="rhel fedora"
[2025-10-12 17:21:51] VERSION_ID="7"
[2025-10-12 17:21:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:21:51] ANSI_COLOR="0;31"
[2025-10-12 17:21:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:21:51] HOME_URL="https://www.centos.org/"
[2025-10-12 17:21:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:21:51] 
[2025-10-12 17:21:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:21:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:21:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:21:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:21:51] 
[2025-10-12 17:21:51] 2025-10-12 21:20:55,436 | INFO     | ***************************************
[2025-10-12 17:21:51] 2025-10-12 21:20:55,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:21:51] 2025-10-12 21:20:56,067 | INFO     | sufficient remaining disk space (127794151424 B)
[2025-10-12 17:21:51] 2025-10-12 21:20:56,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:21:51] 2025-10-12 21:20:56,068 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:21:51] 2025-10-12 21:20:56,068 | INFO     | update_server=False
[2025-10-12 17:21:51] 2025-10-12 21:20:56,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:21:51] 2025-10-12 21:20:56,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:21:51] 2025-10-12 21:20:56,090 | INFO     | aborting loop
[2025-10-12 17:21:51] 2025-10-12 21:20:56,132 | INFO     | all data control threads have been joined
[2025-10-12 17:21:51] 2025-10-12 21:20:56,289 | INFO     | all payload control threads have been joined
[2025-10-12 17:21:51] 2025-10-12 21:20:56,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:21:51] 2025-10-12 21:20:57,078 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:57,095 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:57,139 | INFO     | [data] control thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:57,311 | INFO     | [payload] control thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:57,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:21:51] 2025-10-12 21:20:57,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:21:51] 2025-10-12 21:20:57,600 | INFO     | all job control threads have been joined
[2025-10-12 17:21:51] 2025-10-12 21:20:57,868 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:57,996 | INFO     | [job] validate thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,000 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,001 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,039 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,051 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,078 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,504 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,607 | INFO     | [job] control thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:20:58,843 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:21:01,609 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:21:06,876 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:21:51] 2025-10-12 21:21:07,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:21:51] 2025-10-12 21:21:25,683 | INFO     | PID=410529 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:21:51] 2025-10-12 21:21:25,684 | INFO     | .. there are 23 such processes running
[2025-10-12 17:21:51] 2025-10-12 21:21:25,685 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:21:51] 2025-10-12 21:21:25,685 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:21:51] 2025-10-12 21:21:25,685 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:21:51] 2025-10-12 21:21:43,725 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:21:51] 2025-10-12 21:21:44,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226770650944)>', '<ExcThread(monitor, started 140225833588480)>']
[2025-10-12 17:21:51] 2025-10-12 21:21:45,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:21:51] 2025-10-12 21:21:45,821 | INFO     | [monitor] control thread has ended
[2025-10-12 17:21:51] 2025-10-12 21:21:49,972 | INFO     | all workflow threads have been joined
[2025-10-12 17:21:51] 2025-10-12 21:21:49,972 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:21:51] 2025-10-12 21:21:49,973 | INFO     | traces error code: 0
[2025-10-12 17:21:51] 2025-10-12 21:21:49,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:21:51] 2025-10-12 21:21:50,534 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:21:51] 2025-10-12 21:21:50,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:21:51] 2025-10-12 21:21:50,583 [wrapper] pilotpid: 410529
[2025-10-12 17:21:51] 2025-10-12 21:21:50,598 [wrapper] Pilot exit status: 0
[2025-10-12 17:21:51] 2025-10-12 21:21:50,745 [wrapper] pandaids: 6840181900
[2025-10-12 17:21:51] 2025-10-12 21:21:50,899 [wrapper] cleanup supervisor_pilot 1187205 410531
[2025-10-12 17:21:51] 2025-10-12 21:21:50,904 [wrapper] Test setup, not cleaning
[2025-10-12 17:21:51] 2025-10-12 21:21:50,907 [wrapper] apfmon messages muted
[2025-10-12 17:21:51] 2025-10-12 21:21:50,910 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:21:51] 2025-10-12 21:21:50,913 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:21:51]  *** Error codes and diagnostics ***
[2025-10-12 17:21:51]     "exeErrorCode": 0,
[2025-10-12 17:21:51]     "exeErrorDiag": "",
[2025-10-12 17:21:51]     "pilotErrorCode": 0,
[2025-10-12 17:21:51]     "pilotErrorDiag": "",
[2025-10-12 17:21:51]  *** Listing of results directory ***
[2025-10-12 17:21:51] total 422744
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 10:30 pilot3.tar.gz
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:30 queuedata.json
[2025-10-12 17:21:51] -rwx------. 1 boincer umatlas     36292 Oct 12 10:30 runpilot2-wrapper.sh
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:21:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:48 run_atlas
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:48 job.xml
[2025-10-12 17:21:51] -rw-r--r--. 2 boincer umatlas 222273718 Oct 12 11:48 EVNT.46676267._004240.pool.root.1
[2025-10-12 17:21:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:48 start_atlas.sh
[2025-10-12 17:21:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:48 shared
[2025-10-12 17:21:51] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 11:48 input.tar.gz
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:48 boinc_lockfile
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 11:48 pandaJob.out
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas    975528 Oct 12 11:49 agis_schedconf.cvmfs.json
[2025-10-12 17:21:51] drwx------. 5 boincer umatlas      4096 Oct 12 11:49 pilot3
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas      6948 Oct 12 17:12 init_data.xml
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas 200403349 Oct 12 17:18 HITS.46676269._080765.pool.root.1
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas       530 Oct 12 17:18 boinc_task_state.xml
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas      1046 Oct 12 17:20 memory_monitor_summary.json
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas    532016 Oct 12 17:20 log.46676269._080765.job.log.tgz.1
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas      7796 Oct 12 17:20 heartbeat.json
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas        95 Oct 12 17:21 pilot_heartbeat.json
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas      4896 Oct 12 17:21 pilotlog.txt
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:21 wrapper_checkpoint.txt
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:21 boinc_mmap_file
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas   2621227 Oct 12 17:21 log.46676269._080765.job.log.1
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas       357 Oct 12 17:21 output.list
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:21 runtime_log
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas   3174400 Oct 12 17:21 result.tar.gz
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 17:21 runtime_log.err
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas       659 Oct 12 17:21 MiuLDmpGCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqFkNDmXqz16n.diag
[2025-10-12 17:21:51] -rw-r--r--. 1 boincer umatlas     20976 Oct 12 17:21 stderr.txt
[2025-10-12 17:21:51] HITS file was successfully produced:
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas 200403349 Oct 12 17:18 shared/HITS.pool.root.1
[2025-10-12 17:21:51]  *** Contents of shared directory: ***
[2025-10-12 17:21:51] total 416460
[2025-10-12 17:21:51] -rw-r--r--. 2 boincer umatlas 222273718 Oct 12 11:48 ATLAS.root_0
[2025-10-12 17:21:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:48 start_atlas.sh
[2025-10-12 17:21:51] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 11:48 input.tar.gz
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas 200403349 Oct 12 17:18 HITS.pool.root.1
[2025-10-12 17:21:51] -rw-------. 1 boincer umatlas   3174400 Oct 12 17:21 result.tar.gz
17:21:52 (395045): run_atlas exited; CPU time 37697.881398
17:21:52 (395045): called boinc_finish(0)

</stderr_txt>
]]>

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