Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:51:53 (11049): wrapper (7.7.26015): starting
11:51:53 (11049): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:51:53] Arguments: --nthreads 8
[2025-10-12 11:51:53] Threads: 8
[2025-10-12 11:51:53] Checking for CVMFS
[2025-10-12 11:51:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:51:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:51:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:51:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:51:53] 2.11.2.0 8539 53118 132932 151625 2 188 11583478 18432001 1009 130560 0 50088519 99.975 2273967 37428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 11:51:53] CVMFS is ok
[2025-10-12 11:51:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:51:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:51:53] Further information can be found at the LHC@home message board.
[2025-10-12 11:51:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:51:53] Checking for apptainer binary...
[2025-10-12 11:51:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:51:53] Running /usr/bin/apptainer --version
[2025-10-12 11:51:53] apptainer version 1.3.2-1.el7
[2025-10-12 11:51:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:51:54] c-206-1.aglt2.org
[2025-10-12 11:51:54] apptainer works
[2025-10-12 11:51:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:51:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:51:54] Starting ATLAS job with PandaID=6839821860
[2025-10-12 11:51:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:51:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:51:38] 2025-10-12 18:51:05,063 | INFO     | time since job start (10742s) is within the limit (172800.0s)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,021 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 14:51:38] 2025-10-12 18:51:06,025 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2050.8333333333335
[2025-10-12 14:51:38] 2025-10-12 18:51:06,028 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6839821860/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,029 | INFO     | extracted standard info from prmon json
[2025-10-12 14:51:38] 2025-10-12 18:51:06,029 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:51:38] 2025-10-12 18:51:06,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:51:38] 2025-10-12 18:51:06,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:51:38] 2025-10-12 18:51:06,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:51:38] 2025-10-12 18:51:06,033 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:51:38] 2025-10-12 18:51:06,033 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,034 | INFO     | sum of deviations: 19034692723.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,034 | INFO     | mean x: 1760289685.5
[2025-10-12 14:51:38] 2025-10-12 18:51:06,034 | INFO     | mean y: 2509601.7954545454
[2025-10-12 14:51:38] 2025-10-12 18:51:06,034 | INFO     | -- intersect: -19818583787.911896
[2025-10-12 14:51:38] 2025-10-12 18:51:06,034 | INFO     | intersect: -19818583787.911896
[2025-10-12 14:51:38] 2025-10-12 18:51:06,035 | INFO     | chi2: 1.2204918033484509
[2025-10-12 14:51:38] 2025-10-12 18:51:06,035 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,036 | INFO     | sum of deviations: 18365217540.000004
[2025-10-12 14:51:38] 2025-10-12 18:51:06,036 | INFO     | mean x: 1760289533.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,036 | INFO     | mean y: 2508872.976608187
[2025-10-12 14:51:38] 2025-10-12 18:51:06,036 | INFO     | -- intersect: -20848557991.326973
[2025-10-12 14:51:38] 2025-10-12 18:51:06,036 | INFO     | intersect: -20848557991.326973
[2025-10-12 14:51:38] 2025-10-12 18:51:06,037 | INFO     | chi2: 1.2213562052796216
[2025-10-12 14:51:38] 2025-10-12 18:51:06,037 | INFO     | current chi2=1.2213562052796216 (change=-0.07082406688838526 %)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,037 | INFO     | right removable region: 170
[2025-10-12 14:51:38] 2025-10-12 18:51:06,037 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,038 | INFO     | sum of deviations: -4797239592.000002
[2025-10-12 14:51:38] 2025-10-12 18:51:06,038 | INFO     | mean x: 1760289838.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,038 | INFO     | mean y: 2535237.2573099416
[2025-10-12 14:51:38] 2025-10-12 18:51:06,038 | INFO     | -- intersect: 5449112747.732439
[2025-10-12 14:51:38] 2025-10-12 18:51:06,038 | INFO     | intersect: 5449112747.732439
[2025-10-12 14:51:38] 2025-10-12 18:51:06,039 | INFO     | chi2: 0.013724238040033117
[2025-10-12 14:51:38] 2025-10-12 18:51:06,039 | INFO     | current chi2=0.013724238040033117 (change=98.8755157550112 %)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,039 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 14:51:38] 2025-10-12 18:51:06,040 | INFO     | sum of deviations: -5069240330.500004
[2025-10-12 14:51:38] 2025-10-12 18:51:06,040 | INFO     | mean x: 1760289990.5
[2025-10-12 14:51:38] 2025-10-12 18:51:06,040 | INFO     | mean y: 2535543.186746988
[2025-10-12 14:51:38] 2025-10-12 18:51:06,040 | INFO     | -- intersect: 6293832335.13453
[2025-10-12 14:51:38] 2025-10-12 18:51:06,040 | INFO     | intersect: 6293832335.13453
[2025-10-12 14:51:38] 2025-10-12 18:51:06,041 | INFO     | chi2: 0.012889413887549862
[2025-10-12 14:51:38] 2025-10-12 18:51:06,041 | INFO     | current chi2=0.012889413887549862 (change=6.082845182720543 %)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,041 | INFO     | left removable region: 20
[2025-10-12 14:51:38] 2025-10-12 18:51:06,041 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 14:51:38] 2025-10-12 18:51:06,042 | INFO     | sum of deviations: -3474440196.0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,042 | INFO     | mean x: 1760290112.5
[2025-10-12 14:51:38] 2025-10-12 18:51:06,042 | INFO     | mean y: 2533428.7066666665
[2025-10-12 14:51:38] 2025-10-12 18:51:06,042 | INFO     | -- intersect: 5846883092.230892
[2025-10-12 14:51:38] 2025-10-12 18:51:06,042 | INFO     | intersect: 5846883092.230892
[2025-10-12 14:51:38] 2025-10-12 18:51:06,043 | INFO     | chi2: 0.011909969838377934
[2025-10-12 14:51:38] 2025-10-12 18:51:06,043 | INFO     | -- intersect: 5846883092.230892
[2025-10-12 14:51:38] 2025-10-12 18:51:06,043 | INFO     | current memory leak: -3.32 B/s (using 150 data points, chi2=0.01)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,043 | INFO     | could have reported an average CPU frequency of 2426 MHz (9 samples)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | ..............................
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . Timing measurements:
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . get job = 0 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . initial setup = 2 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . payload setup = 4 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . stage-in = 0 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . payload execution = 10712 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . stage-out = 0 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | . log creation = 0 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,044 | INFO     | ..............................
[2025-10-12 14:51:38] 2025-10-12 18:51:06,132 | INFO     | 
[2025-10-12 14:51:38] 2025-10-12 18:51:06,132 | INFO     | job summary report
[2025-10-12 14:51:38] 2025-10-12 18:51:06,133 | INFO     | --------------------------------------------------
[2025-10-12 14:51:38] 2025-10-12 18:51:06,133 | INFO     | PanDA job id: 6839821860
[2025-10-12 14:51:38] 2025-10-12 18:51:06,133 | INFO     | task id: 46676269
[2025-10-12 14:51:38] 2025-10-12 18:51:06,133 | INFO     | errors: (none)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:51:38] 2025-10-12 18:51:06,133 | INFO     | pilot state: finished 
[2025-10-12 14:51:38] 2025-10-12 18:51:06,134 | INFO     | transexitcode: 0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,135 | INFO     | exeerrorcode: 0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,135 | INFO     | exeerrordiag: 
[2025-10-12 14:51:38] 2025-10-12 18:51:06,135 | INFO     | exitcode: 0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,136 | INFO     | exitmsg: OK
[2025-10-12 14:51:38] 2025-10-12 18:51:06,136 | INFO     | cpuconsumptiontime: 81900 s
[2025-10-12 14:51:38] 2025-10-12 18:51:06,136 | INFO     | nevents: 400
[2025-10-12 14:51:38] 2025-10-12 18:51:06,136 | INFO     | neventsw: 0
[2025-10-12 14:51:38] 2025-10-12 18:51:06,137 | INFO     | pid: 31979
[2025-10-12 14:51:38] 2025-10-12 18:51:06,137 | INFO     | pgrp: 31979
[2025-10-12 14:51:38] 2025-10-12 18:51:06,137 | INFO     | corecount: 8
[2025-10-12 14:51:38] 2025-10-12 18:51:06,137 | INFO     | event service: False
[2025-10-12 14:51:38] 2025-10-12 18:51:06,137 | INFO     | sizes: {0: 2348692, 1: 2348834, 4: 2349096, 12: 2349124, 10720: 2378169, 10722: 2387351, 10727: 2387553}
[2025-10-12 14:51:38] 2025-10-12 18:51:06,137 | INFO     | --------------------------------------------------
[2025-10-12 14:51:38] 2025-10-12 18:51:06,138 | INFO     | 
[2025-10-12 14:51:38] 2025-10-12 18:51:06,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 14:51:38] 2025-10-12 18:51:06,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,155 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:51:38] 2025-10-12 18:51:06,159 | INFO     | job 6839821860 has completed (purged errors)
[2025-10-12 14:51:38] 2025-10-12 18:51:06,159 | INFO     | overall cleanup function is called
[2025-10-12 14:51:38] 2025-10-12 18:51:06,309 | INFO     | PID=16855 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:51:38] 2025-10-12 18:51:06,309 | INFO     | .. there are 3 such processes running
[2025-10-12 14:51:38] 2025-10-12 18:51:07,169 | INFO     | --- collectZombieJob: --- 10, [31979]
[2025-10-12 14:51:38] 2025-10-12 18:51:07,169 | INFO     | zombie collector waiting for pid 31979
[2025-10-12 14:51:38] 2025-10-12 18:51:07,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:51:38] 2025-10-12 18:51:07,169 | INFO     | collected zombie processes
[2025-10-12 14:51:38] 2025-10-12 18:51:07,170 | INFO     | will attempt to kill all subprocesses of pid=31979
[2025-10-12 14:51:38] 2025-10-12 18:51:07,283 | INFO     | process IDs to be killed: [31979] (in reverse order)
[2025-10-12 14:51:38] 2025-10-12 18:51:07,340 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:51:38] 2025-10-12 18:51:07,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:51:38] 2025-10-12 18:51:07,343 | INFO     | did not find any defunct processes belonging to 31979
[2025-10-12 14:51:38] 2025-10-12 18:51:07,346 | INFO     | did not find any defunct processes belonging to 31979
[2025-10-12 14:51:38] 2025-10-12 18:51:07,346 | INFO     | ready for new job
[2025-10-12 14:51:38] 2025-10-12 18:51:07,346 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:51:38] 2025-10-12 18:51:07,348 | INFO     | ***************************************
[2025-10-12 14:51:38] 2025-10-12 18:51:07,348 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:51:38] 2025-10-12 18:51:07,348 | INFO     | ***************************************
[2025-10-12 14:51:38] 2025-10-12 18:51:07,348 | INFO     | 
[2025-10-12 14:51:38] 2025-10-12 18:51:07,349 | INFO     | architecture information:
[2025-10-12 14:51:38] 2025-10-12 18:51:07,350 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:51:38] 2025-10-12 18:51:07,364 | INFO     | cat /etc/os-release:
[2025-10-12 14:51:38] NAME="CentOS Linux"
[2025-10-12 14:51:38] VERSION="7 (Core)"
[2025-10-12 14:51:38] ID="centos"
[2025-10-12 14:51:38] ID_LIKE="rhel fedora"
[2025-10-12 14:51:38] VERSION_ID="7"
[2025-10-12 14:51:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:51:38] ANSI_COLOR="0;31"
[2025-10-12 14:51:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:51:38] HOME_URL="https://www.centos.org/"
[2025-10-12 14:51:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:51:38] 
[2025-10-12 14:51:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:51:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:51:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:51:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:51:38] 
[2025-10-12 14:51:38] 2025-10-12 18:51:07,364 | INFO     | ***************************************
[2025-10-12 14:51:38] 2025-10-12 18:51:07,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 14:51:38] 2025-10-12 18:51:07,881 | INFO     | sufficient remaining disk space (28169994240 B)
[2025-10-12 14:51:38] 2025-10-12 18:51:07,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:51:38] 2025-10-12 18:51:07,881 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:51:38] 2025-10-12 18:51:07,882 | INFO     | update_server=False
[2025-10-12 14:51:38] 2025-10-12 18:51:07,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:51:38] 2025-10-12 18:51:07,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:51:38] 2025-10-12 18:51:07,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:51:38] 2025-10-12 18:51:07,882 | INFO     | aborting loop
[2025-10-12 14:51:38] 2025-10-12 18:51:08,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:51:38] 2025-10-12 18:51:08,887 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:08,887 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:08,888 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:08,889 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:08,944 | INFO     | all data control threads have been joined
[2025-10-12 14:51:38] 2025-10-12 18:51:08,975 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:09,009 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:09,009 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:09,128 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:09,145 | INFO     | all job control threads have been joined
[2025-10-12 14:51:38] 2025-10-12 18:51:09,331 | INFO     | all payload control threads have been joined
[2025-10-12 14:51:38] 2025-10-12 18:51:09,666 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:09,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:09,949 | INFO     | [data] control thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:10,150 | INFO     | [job] control thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:10,167 | INFO     | [job] validate thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:10,336 | INFO     | [payload] control thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:10,720 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:11,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:51:38] 2025-10-12 18:51:15,293 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:51:38] 2025-10-12 18:51:20,567 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:51:38] 2025-10-12 18:51:21,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663170041664)>', '<ExcThread(monitor, started 140662586468096)>']
[2025-10-12 14:51:38] 2025-10-12 18:51:26,402 | INFO     | all workflow threads have been joined
[2025-10-12 14:51:38] 2025-10-12 18:51:26,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:51:38] 2025-10-12 18:51:26,402 | INFO     | traces error code: 0
[2025-10-12 14:51:38] 2025-10-12 18:51:26,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:51:38] 2025-10-12 18:51:38,506 | INFO     | PID=16855 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:51:38] 2025-10-12 18:51:38,507 | INFO     | .. there are 3 such processes running
[2025-10-12 14:51:38] 2025-10-12 18:51:38,507 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:51:38] 2025-10-12 18:51:38,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:51:38] 2025-10-12 18:51:38,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:51:38] 2025-10-12 18:51:38,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:51:38] 2025-10-12 18:51:38,507 | INFO     | [monitor] control thread has ended
[2025-10-12 14:51:38] 2025-10-12 18:51:38,596 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:51:38] 2025-10-12 18:51:38,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:51:38] 2025-10-12 18:51:38,600 [wrapper] pilotpid: 16855
[2025-10-12 14:51:38] 2025-10-12 18:51:38,602 [wrapper] Pilot exit status: 0
[2025-10-12 14:51:38] 2025-10-12 18:51:38,610 [wrapper] pandaids: 6839821860
[2025-10-12 14:51:38] 2025-10-12 18:51:38,636 [wrapper] cleanup supervisor_pilot  4794 16856
[2025-10-12 14:51:38] 2025-10-12 18:51:38,638 [wrapper] Test setup, not cleaning
[2025-10-12 14:51:38] 2025-10-12 18:51:38,640 [wrapper] apfmon messages muted
[2025-10-12 14:51:38] 2025-10-12 18:51:38,642 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:51:38] 2025-10-12 18:51:38,643 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:51:38]  *** Error codes and diagnostics ***
[2025-10-12 14:51:38]     "exeErrorCode": 0,
[2025-10-12 14:51:38]     "exeErrorDiag": "",
[2025-10-12 14:51:38]     "pilotErrorCode": 0,
[2025-10-12 14:51:38]     "pilotErrorDiag": "",
[2025-10-12 14:51:38]  *** Listing of results directory ***
[2025-10-12 14:51:38] total 421656
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:13 queuedata.json
[2025-10-12 14:51:38] -rwx------ 1 boincer umatlas     36292 Oct 12 05:13 runpilot2-wrapper.sh
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas       100 Oct 12 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:51:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 11:51 run_atlas
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas       105 Oct 12 11:51 job.xml
[2025-10-12 14:51:38] -rw-r--r-- 2 boincer umatlas 223930483 Oct 12 11:51 EVNT.46676267._003567.pool.root.1
[2025-10-12 14:51:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:51 start_atlas.sh
[2025-10-12 14:51:38] drwxrwx--x 2 boincer umatlas      4096 Oct 12 11:51 shared
[2025-10-12 14:51:38] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:51 input.tar.gz
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas         0 Oct 12 11:51 boinc_lockfile
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 11:51 pandaJob.out
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas    975528 Oct 12 11:52 agis_schedconf.cvmfs.json
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas   1560580 Oct 12 11:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:51:38] drwx------ 5 boincer umatlas      4096 Oct 12 11:52 pilot3
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas      5950 Oct 12 14:45 init_data.xml
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas       531 Oct 12 14:50 boinc_task_state.xml
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas 200077137 Oct 12 14:50 HITS.46676269._075181.pool.root.1
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas        95 Oct 12 14:50 pilot_heartbeat.json
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas      1052 Oct 12 14:50 memory_monitor_summary.json
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas    426740 Oct 12 14:51 log.46676269._075181.job.log.tgz.1
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas      7854 Oct 12 14:51 heartbeat.json
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:51 boinc_mmap_file
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas        28 Oct 12 14:51 wrapper_checkpoint.txt
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas       820 Oct 12 14:51 pilotlog.txt
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas   1505677 Oct 12 14:51 log.46676269._075181.job.log.1
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas       357 Oct 12 14:51 output.list
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:51 runtime_log
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas   1955840 Oct 12 14:51 result.tar.gz
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas       660 Oct 12 14:51 TfuNDmGK7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtJjNDmkhRuWo.diag
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 14:51 runtime_log.err
[2025-10-12 14:51:38] -rw-r--r-- 1 boincer umatlas     21163 Oct 12 14:51 stderr.txt
[2025-10-12 14:51:38] HITS file was successfully produced:
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas 200077137 Oct 12 14:50 shared/HITS.pool.root.1
[2025-10-12 14:51:38]  *** Contents of shared directory: ***
[2025-10-12 14:51:38] total 416564
[2025-10-12 14:51:38] -rw-r--r-- 2 boincer umatlas 223930483 Oct 12 11:51 ATLAS.root_0
[2025-10-12 14:51:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 11:51 start_atlas.sh
[2025-10-12 14:51:38] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 11:51 input.tar.gz
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas 200077137 Oct 12 14:50 HITS.pool.root.1
[2025-10-12 14:51:38] -rw------- 1 boincer umatlas   1955840 Oct 12 14:51 result.tar.gz
14:51:40 (11049): run_atlas exited; CPU time 82096.218854
14:51:40 (11049): called boinc_finish(0)

</stderr_txt>
]]>

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