Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:37:25 (2507834): wrapper (7.7.26015): starting
03:37:25 (2507834): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 03:37:25] Arguments: --nthreads 3
[2025-10-13 03:37:25] Threads: 3
[2025-10-13 03:37:25] Checking for CVMFS
[2025-10-13 03:37:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:37:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:37:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:37:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:37:25] 2.9.2.0 1010855 5009 83804 151643 1 57 24637140 36864001 0 130560 0 3940039 99.991 173204 691 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 03:37:25] CVMFS is ok
[2025-10-13 03:37:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:37:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:37:25] Further information can be found at the LHC@home message board.
[2025-10-13 03:37:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:37:25] Checking for apptainer binary...
[2025-10-13 03:37:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:37:25] Running /usr/bin/apptainer --version
[2025-10-13 03:37:25] apptainer version 1.4.1-1.1
[2025-10-13 03:37:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:37:25] magicA246b
[2025-10-13 03:37:25] apptainer works
[2025-10-13 03:37:25] Set ATHENA_PROC_NUMBER=3
[2025-10-13 03:37:25] Set ATHENA_CORE_NUMBER=3
[2025-10-13 03:37:25] Starting ATLAS job with PandaID=6839987875
[2025-10-13 03:37:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:01:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:01:48] 2025-10-13 03:01:29,617 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:01:48] 2025-10-13 03:01:29,625 | INFO     | cat /etc/os-release:
[2025-10-13 05:01:48] NAME="CentOS Linux"
[2025-10-13 05:01:48] VERSION="7 (Core)"
[2025-10-13 05:01:48] ID="centos"
[2025-10-13 05:01:48] ID_LIKE="rhel fedora"
[2025-10-13 05:01:48] VERSION_ID="7"
[2025-10-13 05:01:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:01:48] ANSI_COLOR="0;31"
[2025-10-13 05:01:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:01:48] HOME_URL="https://www.centos.org/"
[2025-10-13 05:01:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:01:48] 
[2025-10-13 05:01:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:01:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:01:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:01:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:01:48] 
[2025-10-13 05:01:48] 2025-10-13 03:01:29,625 | INFO     | ***************************************
[2025-10-13 05:01:48] 2025-10-13 03:01:30,128 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:01:48] 2025-10-13 03:01:30,140 | INFO     | sufficient remaining disk space (375737286656 B)
[2025-10-13 05:01:48] 2025-10-13 03:01:30,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | INFO     | update_server=False
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:01:48] 2025-10-13 03:01:30,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:01:48] 2025-10-13 03:01:30,147 | INFO     | all payload control threads have been joined
[2025-10-13 05:01:48] 2025-10-13 03:01:30,672 | INFO     | all job control threads have been joined
[2025-10-13 05:01:48] 2025-10-13 03:01:30,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:01:48] 2025-10-13 03:01:30,874 | INFO     | aborting loop
[2025-10-13 05:01:48] 2025-10-13 03:01:30,954 | INFO     | all data control threads have been joined
[2025-10-13 05:01:48] 2025-10-13 03:01:31,146 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,146 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,153 | INFO     | [payload] control thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:01:48] 2025-10-13 03:01:31,355 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,678 | INFO     | [job] control thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,757 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,867 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,880 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,913 | INFO     | [job] validate thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,955 | INFO     | [data] control thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:31,977 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:32,045 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:32,600 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:33,182 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:33,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:01:48] 2025-10-13 03:01:37,424 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:37,596 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:01:48] 2025-10-13 03:01:41,138 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:01:48] 2025-10-13 03:01:42,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:01:48] 2025-10-13 03:01:43,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713699186496)>', '<ExcThread(monitor, started 140713345914624)>']
[2025-10-13 05:01:48] 2025-10-13 03:01:44,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:01:48] 2025-10-13 03:01:44,216 | INFO     | [monitor] control thread has ended
[2025-10-13 05:01:48] 2025-10-13 03:01:48,461 | INFO     | all workflow threads have been joined
[2025-10-13 05:01:48] 2025-10-13 03:01:48,461 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:01:48] 2025-10-13 03:01:48,461 | INFO     | traces error code: 0
[2025-10-13 05:01:48] 2025-10-13 03:01:48,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:01:48] 2025-10-13 03:01:48,510 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:01:48] 2025-10-13 03:01:48,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:01:48] 2025-10-13 03:01:48,514 [wrapper] pilotpid: 2511553
[2025-10-13 05:01:48] 2025-10-13 03:01:48,517 [wrapper] Pilot exit status: 0
[2025-10-13 05:01:48] 2025-10-13 03:01:48,523 [wrapper] pandaids: 6839987875
[2025-10-13 05:01:48] 2025-10-13 03:01:48,539 [wrapper] cleanup supervisor_pilot 2529772 2511554
[2025-10-13 05:01:48] 2025-10-13 03:01:48,541 [wrapper] Test setup, not cleaning
[2025-10-13 05:01:48] 2025-10-13 03:01:48,544 [wrapper] apfmon messages muted
[2025-10-13 05:01:48] 2025-10-13 03:01:48,546 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:01:48] 2025-10-13 03:01:48,548 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:01:48]  *** Error codes and diagnostics ***
[2025-10-13 05:01:48]     "exeErrorCode": 0,
[2025-10-13 05:01:48]     "exeErrorDiag": "",
[2025-10-13 05:01:48]     "pilotErrorCode": 0,
[2025-10-13 05:01:48]     "pilotErrorDiag": "",
[2025-10-13 05:01:48]  *** Listing of results directory ***
[2025-10-13 05:01:48] total 410064
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:10 pilot3.tar.gz
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:34 queuedata.json
[2025-10-13 05:01:48] -rwx------ 1 boinc boinc     36292 Oct 12 14:35 runpilot2-wrapper.sh
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:01:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:37 run_atlas
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:37 job.xml
[2025-10-13 05:01:48] -rw-r--r-- 2 boinc boinc 218627166 Oct 13 03:37 EVNT.46676267._003786.pool.root.1
[2025-10-13 05:01:48] -rw-r--r-- 2 boinc boinc    569681 Oct 13 03:37 input.tar.gz
[2025-10-13 05:01:48] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:37 start_atlas.sh
[2025-10-13 05:01:48] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:37 shared
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:37 boinc_setup_complete
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc      6448 Oct 13 03:37 init_data.xml
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:37 boinc_lockfile
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc      2549 Oct 13 03:37 pandaJob.out
[2025-10-13 05:01:48] -rw------- 1 boinc boinc    975595 Oct 13 03:37 agis_schedconf.cvmfs.json
[2025-10-13 05:01:48] -rw------- 1 boinc boinc   1560580 Oct 13 03:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:01:48] drwx------ 5 boinc boinc      4096 Oct 13 03:37 pilot3
[2025-10-13 05:01:48] -rw------- 1 boinc boinc        95 Oct 13 05:00 pilot_heartbeat.json
[2025-10-13 05:01:48] -rw------- 1 boinc boinc 195393808 Oct 13 05:01 HITS.46676269._078219.pool.root.1
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:01 boinc_task_state.xml
[2025-10-13 05:01:48] -rw------- 1 boinc boinc      1029 Oct 13 05:01 memory_monitor_summary.json
[2025-10-13 05:01:48] -rw------- 1 boinc boinc    255045 Oct 13 05:01 log.46676269._078219.job.log.tgz.1
[2025-10-13 05:01:48] -rw------- 1 boinc boinc      7761 Oct 13 05:01 heartbeat.json
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:01 wrapper_checkpoint.txt
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:01 boinc_mmap_file
[2025-10-13 05:01:48] -rw------- 1 boinc boinc      4628 Oct 13 05:01 pilotlog.txt
[2025-10-13 05:01:48] -rw------- 1 boinc boinc    738119 Oct 13 05:01 log.46676269._078219.job.log.1
[2025-10-13 05:01:48] -rw------- 1 boinc boinc       357 Oct 13 05:01 output.list
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:01 runtime_log
[2025-10-13 05:01:48] -rw------- 1 boinc boinc   1013760 Oct 13 05:01 result.tar.gz
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc      8797 Oct 13 05:01 runtime_log.err
[2025-10-13 05:01:48] -rw------- 1 boinc boinc       662 Oct 13 05:01 pd6KDmFTAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5mjNDmpHybCn.diag
[2025-10-13 05:01:48] -rw-r--r-- 1 boinc boinc      8904 Oct 13 05:01 stderr.txt
[2025-10-13 05:01:48] HITS file was successfully produced:
[2025-10-13 05:01:48] -rw------- 1 boinc boinc 195393808 Oct 13 05:01 shared/HITS.pool.root.1
[2025-10-13 05:01:48]  *** Contents of shared directory: ***
[2025-10-13 05:01:48] total 405896
[2025-10-13 05:01:48] -rw-r--r-- 2 boinc boinc 218627166 Oct 13 03:37 ATLAS.root_0
[2025-10-13 05:01:48] -rw-r--r-- 2 boinc boinc    569681 Oct 13 03:37 input.tar.gz
[2025-10-13 05:01:48] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:37 start_atlas.sh
[2025-10-13 05:01:48] -rw------- 1 boinc boinc 195393808 Oct 13 05:01 HITS.pool.root.1
[2025-10-13 05:01:48] -rw------- 1 boinc boinc   1013760 Oct 13 05:01 result.tar.gz
05:01:50 (2507834): run_atlas exited; CPU time 14368.686771
05:01:50 (2507834): called boinc_finish(0)

</stderr_txt>
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